prot_H-elongata_contig76459.15317.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig76459.15317.1
Unique Nameprot_H-elongata_contig76459.15317.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length65
Homology
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BLAST of mRNA_H-elongata_contig76459.15317.1 vs. uniprot
Match: A0A6H5JRN5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRN5_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 1.270e-20
Identity = 46/54 (85.19%), Postives = 47/54 (87.04%), Query Frame = 0 
Query:   11 SGLGTRATGMPTLRAIGASHAPITRQGYLYKKGKSGLKNWQKRWFVLEGSKLIW 64
            SG G   TG   +RAIGASHAPITRQGYLYKKGKSGLKNWQKRWFVLEGSKLIW
Sbjct:  509 SGGGVGTTGG--VRAIGASHAPITRQGYLYKKGKSGLKNWQKRWFVLEGSKLIW 560
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BLAST of mRNA_H-elongata_contig76459.15317.1 vs. uniprot
Match: A0A835ZKA0_9STRA (LISK family protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKA0_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 8.380e-15
Identity = 35/50 (70.00%), Postives = 43/50 (86.00%), Query Frame = 0 
Query:   15 TRATGMPTLRAIGASHAPITRQGYLYKKGKSGLKNWQKRWFVLEGSKLIW 64
            +R+    TLR  GA+HAPIT+ GYL+KKGK+GLKNWQ+RWFVLEG+KLIW
Sbjct:  400 SRSQSPGTLR--GATHAPITKCGYLHKKGKTGLKNWQRRWFVLEGTKLIW 447
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BLAST of mRNA_H-elongata_contig76459.15317.1 vs. uniprot
Match: A0A3B3ZJ74_9GOBI (PH domain-containing protein n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B3ZJ74_9GOBI)

HSP 1 Score: 47.4 bits (111), Expect = 4.260e-5
Identity = 18/27 (66.67%), Postives = 23/27 (85.19%), Query Frame = 0 
Query:   31 APITRQGYLYKKGKSGLKNWQKRWFVL 57
            A +T+QG+LYK+G SG+K W KRWFVL
Sbjct:   53 AVVTKQGWLYKQGSSGVKQWNKRWFVL 79
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76459.15317.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JRN5_9PHAE1.270e-2085.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZKA0_9STRA8.380e-1570.00LISK family protein kinase n=1 Tax=Tribonema minus... [more]
A0A3B3ZJ74_9GOBI4.260e-566.67PH domain-containing protein n=1 Tax=Periophthalmu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 24..64
e-value: 3.7E-11
score: 44.9
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 34..63
e-value: 1.2E-5
score: 25.8
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 32..64
score: 11.054
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 18..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig76459contigH-elongata_contig76459:2396..2590 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig76459.15317.1mRNA_H-elongata_contig76459.15317.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig76459 2396..2590 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig76459.15317.1 ID=prot_H-elongata_contig76459.15317.1|Name=mRNA_H-elongata_contig76459.15317.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp
RSPRDGARSDSGLGTRATGMPTLRAIGASHAPITRQGYLYKKGKSGLKNW
QKRWFVLEGSKLIW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom_sf
IPR001849PH_domain