prot_H-elongata_contig76394.15314.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig76394.15314.1
Unique Nameprot_H-elongata_contig76394.15314.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length81
Homology
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BLAST of mRNA_H-elongata_contig76394.15314.1 vs. uniprot
Match: D7FJF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJF7_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 2.810e-33
Identity = 52/81 (64.20%), Postives = 65/81 (80.25%), Query Frame = 0 
Query:    1 QRLLRISSAAAIMNGIFWSFYVGVLEAQLPSTTWEPWGYLGLGCTVLMFGVSNTFAKHWVSNVSYFSDYRLLSIATHTFFG 81
            QR +RISS+  ++NG++WSFYVGVLE  LP+TTWEPWGYLGLG T +M   ++TFA+HWVS +SY  + RLLSI TH FFG
Sbjct:   32 QRNVRISSSVTVVNGLYWSFYVGVLEPHLPTTTWEPWGYLGLGFTAIMTAATHTFARHWVSQISYLPELRLLSIGTHNFFG 112
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76394.15314.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJF7_ECTSI2.810e-3364.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..25
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig76394contigH-elongata_contig76394:1984..2835 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig76394.15314.1mRNA_H-elongata_contig76394.15314.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig76394 1984..2835 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig76394.15314.1 ID=prot_H-elongata_contig76394.15314.1|Name=mRNA_H-elongata_contig76394.15314.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=81bp
QRLLRISSAAAIMNGIFWSFYVGVLEAQLPSTTWEPWGYLGLGCTVLMFG
VSNTFAKHWVSNVSYFSDYRLLSIATHTFFG
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