prot_H-elongata_contig7637.15312.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7637.15312.1
Unique Nameprot_H-elongata_contig7637.15312.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1015
Homology
BLAST of mRNA_H-elongata_contig7637.15312.1 vs. uniprot
Match: A0A6H5KZ42_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ42_9PHAE)

HSP 1 Score: 514 bits (1325), Expect = 2.730e-161
Identity = 511/1135 (45.02%), Postives = 602/1135 (53.04%), Query Frame = 0
Query:    1 MFDKGSGFQALVQMSDVYSAMTAHEAADMQEMYSGCNLIRVGYSNLHNVTVKSNTERSWDFNIGPPLEGVLPPGKSAPDPKNVVVPDAVSSDYR-YPVDGTAPVIPAAPVTSLSTPSRQSSQQSYSAQQYSPYSAQQQPQTXXXXXXXXXXXXXXXGAPPSPVQ---SAYSAPQHQQQAYSEGVGHYGPSPAGGMSGAGSSYAPQPYGQQGYVGQSFGQGAHSPYSQPPFNAHPYVQN-YPPHGPQRG-MGDDNGGNASGAXXXXXGPRGYPRPPS-QTPGNYYQPPPH-LMP-PHGGPYGSIPFS-ERGPNGFGPMGMGAG-----------------RPLPHSAGPVTGTVSGTGAGTLGMGGRVAGXXXXXXXXXXXXXXXXXLQGTSGGG-----GSG-------------ALLQTPMNRPISSI-YDTGAYRPPMRFRTSDKK-SGSVASAGENKHGSRAPRLDPLHIQALSAP--VAKKPIRNLGSEDKPAENGDGGGKAVVPSVREDVSLSGSTAGSDPKDGSRKGGGEAGGKKANKREAAEMLGPDATDQLAAATAKVRVSDALEEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGENGEDSGSKD---GEPSEKIGAEKPITADQGGRKEAKRK--------EREAGSSVKDDTKDGGDCVGGH--ISADVGTNGNHADGTQGSAASGVDEPGSKKGRGASASQMERKAGDENVVENREGAVKVRAEAKEGSCGG-IDENQVVKEEESSGTGGEREGKISGKAEETTSGVDAEVKTAVMEHKVKGGGADS---------------EDVKGKERFLVRAVKDQAVEEKNVDNKSEGGAT-----------------------------HEGLAEAMRAGTWAAAAPASRSPVLMVRQVDTREITAGTLCQLFGLYGDVIKVKLVASRGMALVQMRYAIQAMNAQRLLDQTTLCGMALEVRASSQWTINDPTATNFIKYQGVHR--------YKTASSPEDSIYRGSLSPPCPTLVVDNLSPDVSVEEITELFAKHGAVSSVDVNTHS----ETTTVPSAIAGSG-EP-KPSVQALVHMERDGHIGAIEAAVHALVMTHNLTLHERRLRVSFLGNERHVEK 1014
            MFDKGSG QALVQM++V+SAM+AHEAADMQEMYSGCNLIRVGYSNL NVTVK NTERSWDFNIGPPLEG LPPG +   P     P   +  YR  P    +PV    P    ST  R + QQSYS+QQYSPYSA QQPQ         XXXXXXX           S YS PQHQQQ       +    P+GG    G SY    Y QQGY    +GQ +  P+SQ         Q+ Y   G  RG   D         XXXXX    Y RP       NYY  P + +MP P  GPYGSIPFS ER P GFG MGMG G                 R +P+S  P               G     XXXXXXXXXXXXXXXXX QG +  G     GSG              LLQ PM+R      +D G YR  MRFR+SDKK + + A  G  K  SR PRLDP+ IQAL+A   +AKK +R   SE+   E  + G K    + R      G T     K+G+   GG +G K ANKREAAEMLGPDAT+QLAAATAKV +        + XXXXXXXXXXXXXXXXXXXXXXXXX      DGE    S  KD   G+  EK G+ +          E+KRK        E E G S K     GG  VG    +   V   G    G++G    G D P   K +GA  +  E+   D   V          AE K+ S      E +V    +  GT G  E       E               E +V+ GG D                ++V+G+ +        +   E+   + +EG                                     E +  G WAAA P +RSP++MVR VDT E++ G  C LFGLYGDV+KVK+VASRGMALVQMRY +QA NAQRLLDQT L GM LEV+ SSQWTINDPTAT+F   QG+HR        + T  +P+D  YR SLSPPCPTLVVDN+SPDV+ E IT +FAKHG VSSVD++TH+    +T +  ++  GS  EP KPSVQALVHME DG + A EAAVHAL+MTHNLTL ERRLRVSFL  + H+EK
Sbjct:   75 MFDKGSGSQALVQMANVHSAMSAHEAADMQEMYSGCNLIRVGYSNLQNVTVKGNTERSWDFNIGPPLEGSLPPGVT---PAPTAAPGVGADGYRGAPAASASPVTQGPPTPPSSTSHRHTPQQSYSSQQYSPYSAAQQPQATPYAPPAQXXXXXXXXXXXXXXXXXPSTYS-PQHQQQXXXXXXPYGNVIPSGG----GGSYTSPSYIQQGYA-PPYGQTSTPPFSQQXXXXXXXGQHGYSSRGGARGGSSDXXXXXXXXXXXXXXXXXXYSRPXXXHASTNYYTSPANNVMPQPQSGPYGSIPFSSERSPGGFGSMGMGGGXXXXXXXXXXXXXXXXARAIPYSGRP---------------GXXXXXXXXXXXXXXXXXXXXXXXQGRAAAGRGPPLGSGXXXXXXXXXXXXSGLLQAPMHRQGPMFPHDNGNYRSQMRFRSSDKKPTTNAAPGGAIKPRSRVPRLDPVQIQALTAAAALAKKSVRQPKSEEI-VEGKESGSKTATLAGRGGGGGDGKTLSGFVKEGAGSSGG-SGNKTANKREAAEMLGPDATEQLAAATAKVFLE-------KRXXXXXXXXXXXXXXXXXXXXXXXXXRVSDDGDGEEASLSAEKDVEAGDSLEKAGSRQD---------ESKRKACTVEVDDEGEKGYSGKRTAGAGGGSVGEEALVEGVVTRRGGLRSGSRGG---GKDFPPEDKAKGAGVALEEKAKADGVEV----------AEGKDPSTSQETGEEKVEGATQCDGTTGNAE-------EGEQXXXXXXXXXXXXEPEVEAGGEDKXXXXXXXXXXKLEAGDEVEGRSKGRCEVEAGEKQGERKASDGAEGETKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERVDVGAWAAAGPVARSPIVMVRHVDTLEVSPGAFCHLFGLYGDVMKVKIVASRGMALVQMRYPVQAANAQRLLDQTPLSGMTLEVKPSSQWTINDPTATDFSGVQGLHRQSCWDRFAFSTTPTPDDKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHGPVSSVDLDTHAKAPLDTISARASTGGSNAEPTKPSVQALVHMEADGKVRATEAAVHALIMTHNLTLAERRLRVSFLSGKHHIEK 1147          
BLAST of mRNA_H-elongata_contig7637.15312.1 vs. uniprot
Match: D7FN53_ECTSI (PTB (HnRNP) homolog family member (Ptb-1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN53_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 1.740e-104
Identity = 360/822 (43.80%), Postives = 430/822 (52.31%), Query Frame = 0
Query:  289 GPYGSIPFS-ERGPNGFGPMGMGA-----------------------GRPLPHSAGPVTGTVSGTGAGTLGMGGRVAGXXXXXXXXXXXXXXXXXLQGTSGGGGSGALLQTPMNR--PISSIYDTGAYRPPMRFRTSDKK-SGSVASAGENKHGSRAPRLDPLHIQALSAP--VAKKPIRNLGSEDKPAENGDGGGKAVVPSVREDVSLSGSTAGSDPKDGSRKGGGEAGGKKANKREAAEMLGPDATDQLAAATAKVRVSDALEEDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGENGEDSGSKD---GEPSEKIGAEKP--------ITADQGGRK-EAKRKEREAGSSVKDDTKDGGDCVGGHISADVGTNGNHADGTQGSAASGVDEPGSKKGRGASASQ--------MERKAGDENVVENREGAVKVRAEAK-EGSCGGIDENQVVKEEESSGT----------------------------------------GGEREGKISGKAEETTSGVDAEVKTAVMEHKVKGGGADSEDVKGKERFLVRAVKDQAVEEKNVDNKSEGGATHEGLAEAMRAGTWAAAAPASRSPVLMVRQVDTREITAGTLCQLFGLYGDVIKVKLVASRGMALVQMRYAIQAMNAQRLLDQTTLCGMALEVRASSQWTINDPTATNFIKYQGVHRYKTASSPEDSIYRGSLSPPCPTLVVDNLSPDVSVEEITELFAKHGAVSSVDVNTHSETTT-VPSAIAGSG----EP-KPSVQALVHMERDGHIGAIEAAVHALVMTHNLTLHERRLRVSFLGNERHVEK 1014
            GPYGSIPFS ER P GFG MGMG                         R +PHS  P      G              XXXXXXXXXXXXXXXXXL        SG LLQ PM+R  P+  ++D G YR  MRFR+SDKK + + A  G  K  SR PRLDP+ IQAL+A   VAKK +R   SE+   E  + G +A V + R      G T     K+G+   GG +G K ANKREAAEMLGPDAT+QLAAATAKV +        + XXXXXXXXXXXXXXXXXXXXXXXXX      DGE+   S  KD   G+ SEK G+ +         +  D  G K   KR     G SV ++       V G ++   G          GS   G D P   K +              +E   G++       G  KV   A+ +G  G  +E +  +  E+ G                                         GGE++G+      E   G + E K                                   E+ VD                  G WAAA P +RSP++MVR VDT E++ G  C LFGLYGDV+KVKLVASRGMALVQMRY +QA NAQRLLDQT L GM +EV+ SSQWTINDPTAT+F   QG+HR+ T  +PED  YR SLSPPCPTLVVDN+SPDV+ E IT +FAKHGAVSSVD++TH++      SA+A +G    EP KPSVQALVHME DG + A EAAVHAL+MTHNLTL ERRLRVSFL  E H+EK
Sbjct:  151 GPYGSIPFSSERSPGGFGSMGMGXXXXXXXXXXXXXXXXXXXXXXXXARAIPHSGRP------GRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXSG-LLQAPMHRQGPMF-LHDNGNYRSQMRFRSSDKKPTTNAAPGGAIKPRSRVPRLDPVQIQALTAAAAVAKKSVRQPKSEEN-VEGKESGSEATVVAGRGGGGGDGKTLSGFVKEGAGSSGG-SGNKTANKREAAEMLGPDATEQLAAATAKVFLE-------KRXXXXXXXXXXXXXXXXXXXXXXXXXRVSDDGDGEDASLSAGKDVEAGDSSEKAGSRQDESKRKACAVEGDNEGEKGSGKRTAGAGGGSVGEEAP-----VEGVVTRRGGLR-------SGSTGGGKDFPPEDKTKAEDVXXXXXXXXXGVEVAEGEDPSKSQETGEEKVEEAAQCDGPTGNAEEGKQAENVENDGETXXXXXXXXXXXXXXXXXXXXKLEAGDEVDDXXXXXXXXEGGEKQGEG-----EAGDGAEGETKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERVD-----------------VGAWAAAGPVARSPIVMVRHVDTLEVSPGAFCHLFGLYGDVMKVKLVASRGMALVQMRYPVQAANAQRLLDQTPLSGMTIEVKPSSQWTINDPTATDFSGVQGLHRFSTTPTPEDKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHGAVSSVDLDTHAKAPLDTASALASTGGSNAEPTKPSVQALVHMEADGKVRATEAAVHALIMTHNLTLAERRLRVSFLSGEHHIEK 921          
BLAST of mRNA_H-elongata_contig7637.15312.1 vs. uniprot
Match: A0A7S3UWL0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWL0_HETAK)

HSP 1 Score: 105 bits (261), Expect = 8.320e-20
Identity = 71/196 (36.22%), Postives = 102/196 (52.04%), Query Frame = 0
Query:  798 SPVLMVRQVDTREITAGTLCQLFGLYGDVIKVKLVASRGMALVQMRYAIQAMNAQRLLDQTTLCGMALEVRASSQWTINDPTATNFIKYQGVHRYKTASSPEDSIYRGSLSPPCPTLVVDNLSPDVSVEEITELFAKHGAVSSVDVNTHSETTTVPSAIAGSGEPKPSVQALVHMERDGHIGAIEAAVHALVMTHN 993
            SP+++V+  D   +    L  LFGLYGDV+KVK++  +  ALVQ  + +QA NA   L+ T L G  L    S+ + I D +A++F     VHRY+    P D  Y+ +L PP P L V N+  + + E +  L+ + GAVSSV             A+AG G       A V M        ++ AVHAL+MTH+
Sbjct:  311 SPLVLVQNADPAHVRGEHLAALFGLYGDVLKVKVMTHKACALVQYAHPLQAANAMAFLNDTPLAGQTLRCVRSTSFEIKDQSASDFSAVP-VHRYRGVERPLDPAYQRNLVPPGPRLAVANVG-EATEEALRALYGRFGAVSSV-------------ALAGDGT------ATVEMSD------VQTAVHALIMTHH 479          
BLAST of mRNA_H-elongata_contig7637.15312.1 vs. uniprot
Match: A0A7S2WBW3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBW3_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 4.160e-17
Identity = 83/245 (33.88%), Postives = 114/245 (46.53%), Query Frame = 0
Query:  770 KSEGGATHEGLAEAMRAGTWAAAAPASRSP-----VLMVRQVDTREITAGTLCQLFGLYGDVIKVKLVASRGMALVQMRYAIQAMNAQRLLDQTTLCGMALEVRASSQWTINDPTATNFIKYQGVHRYKTASSPEDSIYRGSLSPPCPTLVV----DNLSPDVSVEEITELFAKHGAVSSVDVNTHSETTTVPSAIAGSGEPKPSVQALVHMERDGHIGAIEAAVHALVMTHNLTLHERRLRVSF 1005
            K+EGG  H  +     A TW  A P + +      VL V  VDT   T   L  LFG+YGDVIKVK+++SR  AL+Q  Y   A  A++ LD   L G  L +  SSQ  INDP+A +      + R+   +SP D +Y+  L PP  TL      +  +PD   EE+ +L AK   V+                     E K    A V ++    + ++EAAV  ++MTH   L    L V F
Sbjct:   39 KAEGGDRH--VRHPDLAQTWLEALPEANTEDGCTRVLHVTNVDTNYCTTDMLAILFGVYGDVIKVKILSSREAALIQFAYPAMAFFARQHLDGCPLLGRNLAIAYSSQVGINDPSAADLTSRPTLRRFSATTSPSDPMYQDHLVPPTNTLKFLFHENKNAPD---EELKKLLAKGCEVT---------------------EMKRISPAEVLVQ----VASVEAAVSGIIMTHGQLLGGVVLSVCF 253          
BLAST of mRNA_H-elongata_contig7637.15312.1 vs. uniprot
Match: A0A7S2XYL8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYL8_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.290e-16
Identity = 39/64 (60.94%), Postives = 50/64 (78.12%), Query Frame = 0
Query:    1 MFDKGSGFQALVQMSDVYSAMTAHEAADMQEMYSGCNLIRVGYSNLHNVTVKSNTERSWDFNIG 64
            +FDKGSGFQALVQ +    A  A ++ D+Q+MY+ CN IRVGYSNL+N+TVK N++RSWDF  G
Sbjct:   99 LFDKGSGFQALVQYASEEPAKLAFDSVDLQDMYTNCNTIRVGYSNLNNITVKQNSDRSWDFTTG 162          
BLAST of mRNA_H-elongata_contig7637.15312.1 vs. uniprot
Match: I2CQY0_NANGC (Polypyrimidine tract binding protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQY0_NANGC)

HSP 1 Score: 92.4 bits (228), Expect = 1.810e-16
Identity = 70/218 (32.11%), Postives = 110/218 (50.46%), Query Frame = 0
Query:  788 TWAAAAPASRSPVLMVRQVDTREITAGTLCQLFGLYGDVIKVKLVASRGMALVQMRYAIQAMNAQRLLDQTTLCGMALEVRASSQWTINDPTATNFIKYQGVHRYKTASSPEDSIYRGSLSPPCPTLVVDNLSPDVSVEEITELFAKHGAVSSVDVNTHSETTTVPSAIAGSGEPKPSVQALVHMERDGHIGAIEAAVHALVMTHNLTLHERRLRVSF 1005
            TW+A  P + + VL+V+ ++   + A  L  LFGLYGDV +VK++  +  A+V+M   +QA  A+ LLD + L G  ++V++S+Q TI D  A +F  +  +H Y+  +SP    Y  +L  P   L + N+  D S      L  +   V  V       T  +PS+            ALV  +      ++EAAVHA ++ HN  +  R L V+F
Sbjct:  122 TWSARLPGTDTCVLIVQGLNMEMVGAEALAALFGLYGDVRRVKMMPEQDSAIVEMERPVQAYVAKWLLDASPLGGRVIKVKSSTQDTIRDVQAQDFTAFP-LHGYRQYASPRHPSYLANLVEPTAVLRIANIDWDTSEITFRSLLTQQEGVMGV-------TRLLPSSHTS--------PALVSFQ------SVEAAVHACILLHNQEVDGRLLYVTF 317          
BLAST of mRNA_H-elongata_contig7637.15312.1 vs. uniprot
Match: A0A4D9D0W9_9STRA (RRM domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0W9_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 4.920e-12
Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    1 MFDKGSGFQALVQMSDVYSAMTAHEAADMQEMYSGCNLIRVGYSNLHNVTVKSNTERSWDFNIGPPLEGVLPPGKSAPDPKN 82
            MF+KG+G QALVQ  DV SA  A+E AD + MY+  NLIRVGYS  H++ V++NT+R+WD+      EG  P G +   P +
Sbjct:  315 MFNKGAGNQALVQYPDVASAQAAYEQADHRNMYTDSNLIRVGYSTHHDIKVRANTDRTWDYTKKKTSEGSAPAGPADTTPSS 396          
BLAST of mRNA_H-elongata_contig7637.15312.1 vs. uniprot
Match: V3ZM21_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZM21_LOTGI)

HSP 1 Score: 79.0 bits (193), Expect = 1.550e-11
Identity = 69/217 (31.80%), Postives = 98/217 (45.16%), Query Frame = 0
Query:  798 SPVLMVRQVDTREITAGTLCQLFGLYGDVIKVKLVASR-GMALVQMRYAIQAMNAQRLLDQTTLCGMALEVRASSQWTINDPTA-------TNFIKYQGVHRYKTASSPEDSIYRGSLSPPCPTLVVDNLSPDVSVEEITELFAKHGAVSSVDVNTHSETTTVPSAIAGSGEPKPSVQALVHMERDGHIGAIEAAVHALVMTHNLTLHER-RLRVSF 1005
            S V++V  +D + +T   L  LFG+YGDV +VK++ ++   AL+QM    QA  A   LD+  + G  + V  S    +  P         T       +HR+K   S        ++ PP   L + N+ P+VS EEITELFAK G V +                     PK    AL+ M        ++ AV+AL+  HN  L E   LRVSF
Sbjct:  247 SSVILVSNLDEQMVTPDALFTLFGVYGDVHRVKILFNKKDNALIQMADPHQAQLAITYLDKVKVWGKPIRVAQSKHSLVQMPKEGQPDAGLTKDFTTSPLHRFKRPGSKNCQ----NIFPPSSVLHLSNIPPNVSEEEITELFAKQGTVKAFKFF-----------------PKDRKMALIQMS------TLDEAVNALIAAHNYQLGENSHLRVSF 436          
BLAST of mRNA_H-elongata_contig7637.15312.1 vs. uniprot
Match: A0A850YM34_AEGCA (PTBP3 protein (Fragment) n=2 Tax=Sylvioidea TaxID=2116661 RepID=A0A850YM34_AEGCA)

HSP 1 Score: 77.0 bits (188), Expect = 4.790e-11
Identity = 68/220 (30.91%), Postives = 99/220 (45.00%), Query Frame = 0
Query:  800 VLMVRQVDTREITAGTLCQLFGLYGDVIKVKLVAS-RGMALVQMRYAIQAMNAQRLLDQTTLCGMALEVRASSQWTIN-------DPTATNFIKYQGVHRYKTASSPEDSIYRGSLSPPCPTLVVDNLSPDVSVEEITELFAKHGAVSSVDVNTHSETTTVPSAIAGSGEPKPSVQALVHMERDG-----HIGAIEAAVHALVMTHNLTLHERR-LRVSF 1005
            VL+VR ++   IT   L  LFG+YGDV +VK++   RG+ALVQM  A QA  A   L+   L G  +    S   TI        D   T       +HR+K  SS        ++ PP  TL + N+ P V+V+++  LF   G+                           +V+    +++D       +G++E AVHAL+  HN    E + LRVSF
Sbjct:  201 VLLVRNLNAEAITPYGLFILFGVYGDVHRVKIMLKKRGIALVQMADAAQAQLAINYLNGQRLYGRVMHATLSKYQTIQLPREGQEDKGLTKDYSNSPLHRFKNPSSKNFQ----NIFPPSATLHLSNIPPSVTVDDLKNLFTSKGS---------------------------TVKGFKFLQKDCKMALIQLGSVEEAVHALIELHNHDFGENQHLRVSF 389          
BLAST of mRNA_H-elongata_contig7637.15312.1 vs. uniprot
Match: A0A023FEQ9_AMBCJ (Putative polypyrimidine tract-binding protein (Fragment) n=1 Tax=Amblyomma cajennense TaxID=34607 RepID=A0A023FEQ9_AMBCJ)

HSP 1 Score: 74.7 bits (182), Expect = 5.410e-11
Identity = 69/220 (31.36%), Postives = 101/220 (45.91%), Query Frame = 0
Query:  795 ASRSPVLMVRQVDTREITAGTLCQLFGLYGDVIKVKLVASR-GMALVQMRYAIQAMNAQRLLDQTTLCGMALEVRASSQWTIN-------DPTATNFIKYQGVHRYKTASSPEDSIYRGSLSPPCPTLVVDNLSPDVSVEEITELFAKHGAVSSVDVNTHSETTTVPSAIAGSGEPKPSVQALVHMERDGHIGAIEAAVHALVMTHNLTLHE-RRLRVSF 1005
            A+ S VL+V  ++ + +T   L  LFG+YGDVI+VK++ ++   AL+QM    QA  A   LD+  + G  + V  S    +        D   T       +HR+K    P    Y+ ++ PP  TL + N+ P VS E+I E F + G                   +A    PK    AL+ M      G++E AV AL+  HN  L +   LRVSF
Sbjct:   54 ATTSCVLLVSNLNEQMVTPDALFTLFGVYGDVIRVKILFNKKDSALIQMAEPQQAQLAMSHLDKIKVYGKPVRVTPSKHHIVQLPKDGQPDAGLTKDYINSPLHRFK---KPGSKNYQ-NIYPPSATLHLSNIPPAVSEEQIREAFTQTGGT----------------VVAFKFFPKDRKMALIQM------GSVEEAVTALIKMHNYQLSDSNHLRVSF 247          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7637.15312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZ42_9PHAE2.730e-16145.02RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FN53_ECTSI1.740e-10443.80PTB (HnRNP) homolog family member (Ptb-1) n=1 Tax=... [more]
A0A7S3UWL0_HETAK8.320e-2036.22Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2WBW3_9STRA4.160e-1733.88Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2XYL8_9STRA1.290e-1660.94Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
I2CQY0_NANGC1.810e-1632.11Polypyrimidine tract binding protein n=1 Tax=Nanno... [more]
A0A4D9D0W9_9STRA4.920e-1248.78RRM domain-containing protein n=1 Tax=Nannochlorop... [more]
V3ZM21_LOTGI1.550e-1131.80Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]
A0A850YM34_AEGCA4.790e-1130.91PTBP3 protein (Fragment) n=2 Tax=Sylvioidea TaxID=... [more]
A0A023FEQ9_AMBCJ5.410e-1131.36Putative polypyrimidine tract-binding protein (Fra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 913..1004
e-value: 5.9E-5
score: 32.5
coord: 800..868
e-value: 1.2E-6
score: 38.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 799..872
score: 10.053
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 904..1008
e-value: 8.0E-12
score: 47.0
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..65
e-value: 6.1E-11
score: 44.3
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 793..888
e-value: 1.2E-12
score: 49.7
NoneNo IPR availablePFAMPF13893RRM_5coord: 786..877
e-value: 6.2E-13
score: 48.4
NoneNo IPR availablePANTHERPTHR15592MATRIN 3/NUCLEAR PROTEIN 220-RELATEDcoord: 2..133
NoneNo IPR availablePANTHERPTHR15592:SF18HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN Lcoord: 2..133
coord: 779..1008
NoneNo IPR availablePANTHERPTHR15592MATRIN 3/NUCLEAR PROTEIN 220-RELATEDcoord: 779..1008
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 810..947

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7637contigH-elongata_contig7637:3847..10160 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7637.15312.1mRNA_H-elongata_contig7637.15312.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7637 3064..10221 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7637.15312.1 ID=prot_H-elongata_contig7637.15312.1|Name=mRNA_H-elongata_contig7637.15312.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1015bp
MFDKGSGFQALVQMSDVYSAMTAHEAADMQEMYSGCNLIRVGYSNLHNVT
VKSNTERSWDFNIGPPLEGVLPPGKSAPDPKNVVVPDAVSSDYRYPVDGT
APVIPAAPVTSLSTPSRQSSQQSYSAQQYSPYSAQQQPQTQTYPPQLQPQ
QQHTYGAPPSPVQSAYSAPQHQQQAYSEGVGHYGPSPAGGMSGAGSSYAP
QPYGQQGYVGQSFGQGAHSPYSQPPFNAHPYVQNYPPHGPQRGMGDDNGG
NASGAGAGVGGPRGYPRPPSQTPGNYYQPPPHLMPPHGGPYGSIPFSERG
PNGFGPMGMGAGRPLPHSAGPVTGTVSGTGAGTLGMGGRVAGGGAGRGPG
YGGRGGGRGLQGTSGGGGSGALLQTPMNRPISSIYDTGAYRPPMRFRTSD
KKSGSVASAGENKHGSRAPRLDPLHIQALSAPVAKKPIRNLGSEDKPAEN
GDGGGKAVVPSVREDVSLSGSTAGSDPKDGSRKGGGEAGGKKANKREAAE
MLGPDATDQLAAATAKVRVSDALEEDGEGKRAIKREAAEMLGLDAADQLA
AATARVRVSDDGENGEDSGSKDGEPSEKIGAEKPITADQGGRKEAKRKER
EAGSSVKDDTKDGGDCVGGHISADVGTNGNHADGTQGSAASGVDEPGSKK
GRGASASQMERKAGDENVVENREGAVKVRAEAKEGSCGGIDENQVVKEEE
SSGTGGEREGKISGKAEETTSGVDAEVKTAVMEHKVKGGGADSEDVKGKE
RFLVRAVKDQAVEEKNVDNKSEGGATHEGLAEAMRAGTWAAAAPASRSPV
LMVRQVDTREITAGTLCQLFGLYGDVIKVKLVASRGMALVQMRYAIQAMN
AQRLLDQTTLCGMALEVRASSQWTINDPTATNFIKYQGVHRYKTASSPED
SIYRGSLSPPCPTLVVDNLSPDVSVEEITELFAKHGAVSSVDVNTHSETT
TVPSAIAGSGEPKPSVQALVHMERDGHIGAIEAAVHALVMTHNLTLHERR
LRVSFLGNERHVEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf