prot_H-elongata_contig76232.15301.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig76232.15301.1
Unique Nameprot_H-elongata_contig76232.15301.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length157
Homology
BLAST of mRNA_H-elongata_contig76232.15301.1 vs. uniprot
Match: A0A6H5KG25_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG25_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 9.300e-61
Identity = 108/151 (71.52%), Postives = 128/151 (84.77%), Query Frame = 0
Query:    7 DWKIPYVVIQEQAKGLYKSTLDAWASGGRILSAEQKESLDKMAAFLGMDALAIEETHAEICSETFRKAVAESMGATGVVVAEYRAKLDELAERLGLTARSAKAMFHAAVRQRMGPMVQQIMYEFERSVLSKGELARKMGKDAGDDVLGATG 157
             +KIPYVVI EQAK LYK TL A+A G RI++ ++K++LDKMA FL MD+ A++E HAE+CS TF+KAVAESMGATGVV  EYR+KLDELA RLGL+  SAK MFHAA+RQRMGPM+QQIMYEFERSVLSK +LA+K GKD GDDV+GA G
Sbjct:  609 SFKIPYVVIAEQAKDLYKKTLTAYAGGNRIITVDEKDTLDKMAEFLSMDSAAVDEIHAELCSTTFQKAVAESMGATGVVAKEYRSKLDELAVRLGLSLESAKLMFHAAIRQRMGPMMQQIMYEFERSVLSKEQLAQKTGKDMGDDVMGAEG 759          
BLAST of mRNA_H-elongata_contig76232.15301.1 vs. uniprot
Match: A0A835YSG6_9STRA (IAP100 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSG6_9STRA)

HSP 1 Score: 125 bits (313), Expect = 2.960e-30
Identity = 65/144 (45.14%), Postives = 94/144 (65.28%), Query Frame = 0
Query:   10 IPYVVIQEQAKGLYKSTLDAWASGGRILSAEQKESLDKMAAFLGMDALAIEETHAEICSETFRKAVAESMGATGVVVAEYRAKLDELAERLGLTARSAKAMFHAAVRQRMGPMVQQIMYEFERSVLSKGELARKMGKDAGDDVL 153
            IP  V+ EQ K LY   L A A  G I++  Q++ L K+  FLG+D   ++  H  +C+  +++++ ESMGA GV+  E R  L+ L +RLGLT   A+ + HAA R +M PMV+Q+ YEFER+ LSK +LA++ G+D GDDVL
Sbjct:  546 IPKAVVSEQLKDLYFQRLKAVAGYGTIMTQAQRDDLHKLQDFLGLDQDTVDGLHRLVCAPAYQQSILESMGAAGVITPELRDALEVLRKRLGLTQSHARELLHAAARAKMKPMVEQLCYEFERTYLSKEQLAQRRGRDQGDDVL 689          
BLAST of mRNA_H-elongata_contig76232.15301.1 vs. uniprot
Match: A0A7S2UAH8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAH8_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 5.870e-19
Identity = 49/149 (32.89%), Postives = 90/149 (60.40%), Query Frame = 0
Query:    7 DWKIPYVVIQEQAKGLYKSTLDAWA--SGGRILSAEQKESLDKMAAFLGMDALAIEETHAEICSETFRKAVAESMGATGVVVAEYRAKLDELAERLGLTARSAKAMFHAAVRQRMGPMVQQIMYEFERSVLSKGELARKMGKDAGDDVL 153
            D+K+   ++++ A  +Y   + A A  + G I +  Q+++L+ +   L ++       H  +    +++ V E+MGATG+++ EYR  LD L  RLG++  +++A+F  A+++R  PMV+ +  E ER+VL++ +LARK  KD G+DV 
Sbjct:  663 DYKLSDQMVRQYAATMYDRAVGAIADRAPGGIPTTSQEQALESLQELLHLEKEQTYNAHVNVFGAAYKRGVLEAMGATGIILPEYRPSLDNLRMRLGVSEEASRALFLEAIKERFLPMVEAVANEMERTVLTQQQLARKRNKDMGEDVF 811          
BLAST of mRNA_H-elongata_contig76232.15301.1 vs. uniprot
Match: A0A7S3VC95_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VC95_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.290e-17
Identity = 50/120 (41.67%), Postives = 75/120 (62.50%), Query Frame = 0
Query:   34 GRILSAEQKESLDKMAAFLGMDALAIEETHAEICSETFRKAVAESMGATGVVVAEYRAKLDELAERLGLTARSAKAMFHAAVRQRMGPMVQQIMYEFERSVLSKGELARKMGKDAGDDVL 153
            G + +++  E LD +   LGM        H +    T++K+V ESMGATGV+  EYRA L  L ERLG++A SA+ ++  A+ +RM PMV+ I+ E ER++L+  +LA+K  KD G+D  
Sbjct:  645 GGVPTSDVMEQLDALRGLLGMSESDGYPAHLDTFGGTYKKSVQESMGATGVITEEYRAPLATLRERLGVSAESARGLYLEAMEERMIPMVEWIVLELERTMLTAEQLAQKRQKDFGEDYF 764          
BLAST of mRNA_H-elongata_contig76232.15301.1 vs. uniprot
Match: A0A7R9WBI8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WBI8_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.480e-17
Identity = 50/149 (33.56%), Postives = 87/149 (58.39%), Query Frame = 0
Query:    7 DWKIPYVVIQEQAKGLYKSTLDAWASG--GRILSAEQKESLDKMAAFLGMDALAIEETHAEICSETFRKAVAESMGATGVVVAEYRAKLDELAERLGLTARSAKAMFHAAVRQRMGPMVQQIMYEFERSVLSKGELARKMGKDAGDDVL 153
            D+++   ++ E    LY   +   +      I S E+ E+LD + + L +        H E+  E ++++V E+MG TGV+  E+R  L +L  RLG+T  +A+ +F  AV++RM PMV+ ++ E ER++L++ +LA+K  KD G+DV 
Sbjct:   43 DYRLSDSLVLEYGANLYLKAVGVVSQNTPSGIPSKEKMEALDGLRSLLRLSKEDTYPAHLEVFGEVYKRSVLEAMGPTGVIRPEFREPLVDLRARLGVTEDAARQLFLDAVKERMVPMVEDLVLELERTMLNQQQLAQKRQKDFGEDVF 191          
BLAST of mRNA_H-elongata_contig76232.15301.1 vs. uniprot
Match: A0A7S4MJ83_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MJ83_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 3.360e-15
Identity = 48/149 (32.21%), Postives = 83/149 (55.70%), Query Frame = 0
Query:    7 DWKIPYVVIQEQAKGLYKSTLDAWASG--GRILSAEQKESLDKMAAFLGMDALAIEETHAEICSETFRKAVAESMGATGVVVAEYRAKLDELAERLGLTARSAKAMFHAAVRQRMGPMVQQIMYEFERSVLSKGELARKMGKDAGDDVL 153
            D+++   ++ E    LY   +   +      I S E   +L  +   L +        H E+  E ++++V E+MG TGV+  E+R  L +L  RLG+T  +A+ ++ AAV++RM PMV+ ++ E ER++L + +LA+K  KD G+DV 
Sbjct:  630 DYRLSDTLVMEYGANLYLKAVGVVSQNTPSGIPSKESSGALQGLRELLRLSEEDAYPAHLEVFGEVYKRSVLEAMGPTGVIRPEFREPLVDLRNRLGVTEDAARELYLAAVKERMVPMVEDLVLELERTMLDQQQLAQKRKKDFGEDVF 778          
BLAST of mRNA_H-elongata_contig76232.15301.1 vs. uniprot
Match: A0A7S3WAT0_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WAT0_9SPIT)

HSP 1 Score: 67.4 bits (163), Expect = 3.610e-10
Identity = 38/123 (30.89%), Postives = 68/123 (55.28%), Query Frame = 0
Query:   33 GGRILSAEQKESLDKMAAFLGMDALAIEETHAEICSETFRKAVAESMGATGVVVAEYRAKLDELAERLGLTARSAKAMFHAAVRQRMGPMVQQIMYEFERSVLSKGELA---RKMGKDAGDDV 152
            G R++ A++K +LD +  FL +    +   H +   + +  +V E+MG  GV+ A     L++L +RLG+TA  ++ +F++ V  R+   +  +   +E +  SK  LA   ++ GKD GDDV
Sbjct:    3 GSRVIKADEKGALDAVRGFLELTEADVRLLHLKTFGKIYENSVQEAMGRGGVMTAAALEALEQLRDRLGITAEDSQKIFYSVVEARLKGFMVDVQEAYEEATYSKESLAAMWKERGKDVGDDV 125          
BLAST of mRNA_H-elongata_contig76232.15301.1 vs. uniprot
Match: A0A7S4IDD1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IDD1_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 7.030e-9
Identity = 35/89 (39.33%), Postives = 54/89 (60.67%), Query Frame = 0
Query:   65 EICSETFRKAVAESMGATGVVVAEYRAKLDELAERLGLTARSAKAMFHAAVRQRMGPMVQQIMYEFERSVLSKGELARKMGKDAGDDVL 153
            E+  E  +  V E  G  GV   E    L +L  RLG+T  +A+ ++ AAV++RM PMV+ ++ E ER++L + +LA+K  KD G+DV 
Sbjct:    5 EVLGEFKKGVVLEEGGPRGVPRPESGEPLVDLRNRLGVTEDAARELYLAAVKERMVPMVEDLVLELERTMLDQQQLAQKRKKDFGEDVF 93          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76232.15301.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KG25_9PHAE9.300e-6171.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YSG6_9STRA2.960e-3045.14IAP100 protein n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A7S2UAH8_9STRA5.870e-1932.89Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S3VC95_9STRA1.290e-1741.67Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7R9WBI8_9STRA1.480e-1733.56Hypothetical protein (Fragment) n=2 Tax=Pseudictyo... [more]
A0A7S4MJ83_9STRA3.360e-1532.21Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S3WAT0_9SPIT3.610e-1030.89Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7S4IDD1_9STRA7.030e-939.33Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031610Protein TIC110, chloroplasticPFAMPF16940Tic110coord: 19..125
e-value: 1.1E-7
score: 30.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig76232contigH-elongata_contig76232:1769..2417 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig76232.15301.1mRNA_H-elongata_contig76232.15301.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig76232 1769..2417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig76232.15301.1 ID=prot_H-elongata_contig76232.15301.1|Name=mRNA_H-elongata_contig76232.15301.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp
MATPLFDWKIPYVVIQEQAKGLYKSTLDAWASGGRILSAEQKESLDKMAA
FLGMDALAIEETHAEICSETFRKAVAESMGATGVVVAEYRAKLDELAERL
GLTARSAKAMFHAAVRQRMGPMVQQIMYEFERSVLSKGELARKMGKDAGD
DVLGATG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031610TIC110