prot_H-elongata_contig76085.15288.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig76085.15288.1
Unique Nameprot_H-elongata_contig76085.15288.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length261
Homology
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: A0A401H6Z2_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H6Z2_9APHY)

HSP 1 Score: 150 bits (379), Expect = 1.440e-37
Identity = 98/294 (33.33%), Postives = 147/294 (50.00%), Query Frame = 0
Query:    1 MGEAQASSEWPQWKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTPAQASIRMVLNTIAALGWKVRQLDVGMVYLEADVEEDIYVELP--EAYLDSRNQVGLRKKAMYGLVHAGLLWSKQFGIELEAKGFQRSQANPC------EQAV-------------------------RDLCSCFPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVTKT-SIVPSAAGGKALSKSDSPQTDAEVEEMR 260
            + EA  S+EWP+W   IA+EM    + G + +VE PK   ++ ++ VF+ K + +G IE YK RLVAQGF QV GI + E+ +P    ASIR++L   A   W++ Q+DV  VYL  D+EE+IY+  P  +A     + V   K+ +YGL  +G  + K+   EL + G  RS+ + C      E+ V                         R++   F + DLGE  + LG  +R DR+A TL   Q  YI  ++  F +    S+      G  LS    P T  + E+M+
Sbjct:  748 LNEAMQSTEWPKWTEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILTLAAHYDWELHQMDVKGVYLNGDLEEEIYMWQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCIFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISMHFEMSDLGEMHWILGIEVRRDRDARTLSLSQCAYIDMILARFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMK 1041          
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: A0A6A3JRZ2_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JRZ2_9STRA)

HSP 1 Score: 143 bits (360), Expect = 3.250e-37
Identity = 98/287 (34.15%), Postives = 139/287 (48.43%), Query Frame = 0
Query:    6 ASSEWPQWKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTPAQASIRMVLNTIAALGWKVRQLDVGMVYLEADVEEDIYVELPEAYLDSRNQVGLRKKAMYGLVHAGLLWSKQFGIELEAKGFQRSQANPCEQAVRD------------------------------LCSCFPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVTKTSIV--PSAAGGKALSKSDSPQTDAEVEEMR 260
            AS +  QW+  +  E+      G W +V R  A   +  R VF +K D  GR+ +YK RLVA+GF+Q  GI + E+ SP     SIR+VL+  AA  +++ QLD    +L +++++ +Y+E+P    ++R+      KA+YGL  A   W+K         GF+   A+ C    R                               L + F +K+LG A + LG  I  D  AGTLK  Q +YI  VV+ FG      V  P AAG K LSK+ SP TDAE   MR
Sbjct:    2 ASDDAAQWREAMDAELLSHERNGTWTLVPRGTANRTIGCRWVFAKKRDQYGRVVRYKARLVAKGFKQKYGIDFFETYSPVANMNSIRVVLSVCAAYEYRMEQLDADTAFLNSELKDRVYMEVPFGIENARDYQYQLNKAIYGLKQAASAWNKTIHRVFLGNGFKSCGADQCVYVKRSKNGFIYVCLYVDDMIIAAKTSEDIREVKDALKNAFKMKELGPAKFILGMEIDHDMTAGTLKIKQTRYIDDVVKRFGQENAKPVDNPCAAGLK-LSKTQSPGTDAEQNAMR 287          
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: A0A1Y1M2G6_PHOPY (Uncharacterized protein n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1M2G6_PHOPY)

HSP 1 Score: 147 bits (371), Expect = 1.700e-36
Identity = 92/274 (33.58%), Postives = 140/274 (51.09%), Query Frame = 0
Query:    3 EAQASSEWPQWKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTPAQASIRMVLNTIAALGWKVRQLDVGMVYLEADVEEDIYVELPEAY---LDSRNQVGLRKKAMYGLVHAGLLWSKQFGIELEAKGFQRSQANPC---------------------------EQAVRDLCSCFPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVT--KTSIVPSAAGGKAL 244
            EA  S E   W   I  E +   +   W +VERP+   +L +  +FKRK D+ GRI KYK RLVA G  Q K + Y++S SP   + ++R++L       W++  +DV   YL A ++E+ Y+E+P+ +   L+ +  V   KK++YGL  +G LW+++    L+  G QRS+ +PC                           E+    L   F IKDLGEAS  L  +I+  R  G+LK DQ  YI  ++++FG+T  K +  P   G K +
Sbjct:  849 EAMKSKEKYDWHEAIQEEYENLISNDTWNIVERPRDAKILRSMWIFKRKYDDCGRIMKYKARLVALGNHQTKYVDYEKSFSPVIMRKTMRILLAISVRKNWEINHIDVNCAYLNARLDEETYMEIPDGFDENLNKKKYVCELKKSLYGLHQSGYLWNQEINEFLKKMGMQRSRMDPCLYYNTERTLIVTLYVDDMVLHGLKTEIEKLKNALSKNFKIKDLGEASRVLSINIK--RFNGSLKIDQRDYILNILKNFGMTDCKPAATPLELGAKYM 1120          
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: A0A2R6PCF8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6PCF8_9APHY)

HSP 1 Score: 147 bits (371), Expect = 1.730e-36
Identity = 96/294 (32.65%), Postives = 146/294 (49.66%), Query Frame = 0
Query:    3 EAQASSEWPQWKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTPAQASIRMVLNTIAALGWKVRQLDVGMVYLEADVEED--IYVELPEAYL--DSRNQVGLRKKAMYGLVHAGLLWSKQFGIELEAKGFQRSQAN--------------------PC----------EQAVRDLCSCFPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVT--KTSIVPSAAGGKALSKSDSPQTDAEVEEMR 260
            EA+   +WP+W   I  E++     G W++V+RP A  V+ ++ V + K D  G I+KYK RLVAQGF Q+ GI Y E+ +P    +SIR++L   A  GW ++  D    YL + +++D  IY+E P  +   D +N V   +KA+YGL   G  W +   I L   GF R++++                     C           +  R +   +P+ DLGE S+ LG  +  DR A TL   QH YI +++  F  T  K S +P     + L+KS  P + A++  MR
Sbjct:  968 EARKRPDWPKWLAAIRAELESLKLNGTWELVDRPSAVNVVGSKWVLRIKKDASGAIDKYKARLVAQGFTQIHGIDYFETFAPVAKLSSIRLILAIAARNGWDIQSFDFNSAYLNSTLDDDEVIYLEQPPDFAEKDPKNYVLRLRKALYGLKQGGRKWYEHLCIALADLGFNRAESDYGVFFAIDANNITVLAIHVDDCAITGSSTPLISEYKRRIGEKYPLTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQ-LTKSQCPTSLADIARMR 1260          
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 145 bits (367), Expect = 5.890e-36
Identity = 88/282 (31.21%), Postives = 143/282 (50.71%), Query Frame = 0
Query:    3 EAQASSEWPQWKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTPAQASIRMVLNTIAALGWKVRQLDVGMVYLEADVEEDIYVELPEAYLDSRNQVGLRKKAMYGLVHAGLLWSKQFGIELEAKGFQRSQANPC------------------------------EQAVRDLCSCFPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVTKTSIVPSAAGGKA-LSKSDSPQTD 253
            +A +  +  +W++    E++     GV++ V RP+ + ++ ++ VFK K   DG++EKYK RLVAQGF QV+GI Y E+ +P     SIR++L   A   W++ Q+DV   +L  ++EE+IY+++P  +  S + V   KKA+YGL  A   W K+   EL+  GF R QA+ C                               +   DL S F + DLGE  + L   +  +R   T++  Q QYI+ ++E  G+ +   V +    K  L K  +P+ +
Sbjct: 1000 DAMSQEDAAEWRKACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMDRHPPIIAVYVDDNMVLSDSLDLVTKTKSDLGSRFDMTDLGEVCWILNMEVTRNRQERTIRLSQSQYIEDILERHGMAECKPVHTPMDSKLKLEKLHAPEVN 1281          
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: A0A6A3GX66_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GX66_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.570e-34
Identity = 97/268 (36.19%), Postives = 132/268 (49.25%), Query Frame = 0
Query:   25 TARGVWQVVERPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTPAQASIRMVLNTIAALGWKVRQLDVGMVYLEADVEEDIYVELPEAYLDSRNQVGLRKKAMYGLVHAGLLWSKQFGIELEAKGFQRSQANPCEQAVRD------------------------------LCSCFPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVTKTSIV--PSAAGGKALSKSDSPQTDAEVEEMR 260
            TA G W    RP   TV S R VF +K D  GR+ +YK RLVA+GF+Q  GI + E+ SP      IR+VL+  AA  +++ QLD    +L +++++ +Y+E+P    ++R+      KA+YGL  A   W+K         GF+   A+ C    R                               L + F +K+LG A + LG  I  D  AGTLK +Q +YI  VVE FG      V  P AAG K LSK+ SP TDAE   MR
Sbjct:   78 TALGHWCHEVRP---TVPSARWVFAKKRDQYGRVVRYKARLVAKGFKQKYGIDFFETYSPVANMNMIRVVLSVCAAYEYRMEQLDADTAFLNSELKDRVYMEVPFGIENARDYQCQLNKAIYGLKQAASAWNKTIHRVFLGNGFKSCGADQCVYVKRSKNGFIYVCLYVDDMIIAAKTSEDIREVKDALKNAFKMKELGPAKFILGMEIDHDMTAGTLKIEQTRYIDDVVERFGQENAKPVDNPCAAGVK-LSKTQSPGTDAEQNAMR 341          
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: A0A4Y9XTU1_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=A0A4Y9XTU1_9APHY)

HSP 1 Score: 140 bits (354), Expect = 3.170e-34
Identity = 98/280 (35.00%), Postives = 141/280 (50.36%), Query Frame = 0
Query:   13 WKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTPAQASIRMVLNTIAALGWKVRQLDVGMVYLEADVEEDIYVELPEAYLDSRNQVGLRKKAMYGLVHAGLLWSKQFGIELEAKGFQRSQAN------------------------------PCEQAVRDLCSCFPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVTKTSIV--PSAAGGKALSKSDSPQTDAEVEEMR 260
            WK   A E+   T   ++  VERP+ + V+  + VFK K   DG IEKYK RLVA+GF QV+ + Y E+ +PT   ++IR +L   AA   ++ Q+DV   +L  D++E+IY+  P  + D  + V   +KA+YGL  A   W K+   E E+ GF+RS A+                                +     L   F + DLGEA + L   I  DR   TL+  Q QY++T++E FG+T    V  P AA  K L+K D    +AEV+E R
Sbjct:  964 WKAACAEELLSFTKAELYDEVERPRNRKVVGCKWVFKIKRGPDGEIEKYKARLVAKGFTQVEDVDYDETFAPTTKFSTIRTLLALAAAHDLEIHQMDVKSAFLNGDLDEEIYMACPPGFEDRPDIVWRLRKALYGLKQASRQWYKKIRAEFESLGFKRSDADHGVFYKEVDGSLVIVALYVDDMLIFADKVSAIDSVKASLKEKFDMTDLGEAHWVLNMEIIRDRPNRTLELSQRQYVETILERFGMTDCRPVSTPMAANQK-LAKLD----EAEVDEKR 1238          
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: A0A6A4CLK4_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=10 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CLK4_9STRA)

HSP 1 Score: 138 bits (348), Expect = 3.570e-34
Identity = 97/288 (33.68%), Postives = 141/288 (48.96%), Query Frame = 0
Query:    6 ASSEWPQWKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTP-AQASIRMVLNTIAALGWKVRQLDVGMVYLEADVEEDIYVELPEAYLDSRNQVGLRKKAMYGLVHAGLLWSKQFGIELEAKGFQRSQANPC--------------------------EQAVRD----LCSCFPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVTKTSIV--PSAAGGKALSKSDSPQTDAEVEEMR 260
            AS +  QW+  +  E+      G W +V R  A   +  R VF +K D  GR+ +YK RLVA+GF+Q  GI + E+ SP     +++R+VL+  AA  +++ QLD    +L +++++ +Y+E+P    ++R       KA+YGL  A   W+K         GF+   A+ C                           + +RD    L + F +K+LG A + LG  I  D  AGTLK    +YI  VVE FG      V  P AAG K LSK+ SP TDAE   MR
Sbjct:    2 ASDDAEQWREAMDAELLSHERNGTWTLVPRGTASRTIGCRWVFAKKRDQYGRVVRYKARLVAKGFKQKYGIDFFETYSPVANMNSTLRVVLSVCAAYEYRMEQLDADTAFLNSELKDRVYMEVPFGIENARGYQYQLNKAIYGLKQAASAWNKTIHRVFLGNGFKSCGADQCVYVKRSKNGFIYVCLYVDDMIIAAKTSEEIRDVKDALKNAFKMKELGPAKFILGMEIDHDMTAGTLKIKPTRYIDDVVEHFGQENAKPVDNPCAAGLK-LSKTQSPGTDAEQNAMR 288          
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 140 bits (352), Expect = 5.900e-34
Identity = 97/296 (32.77%), Postives = 142/296 (47.97%), Query Frame = 0
Query:    3 EAQASSEWPQWKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTPAQASIRMVLNTIAALGWKVRQLDVGMVYLEADVEEDIYVELP--EAYLDSRNQVGLRKKAMYGLVHAGLLWSKQFGIELEAKGFQRSQANPC---------------------------EQAV----RDLCSCFPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVT-----KTSIVPSAAGGKALSKSDSPQTDAEVEEMR 260
            EA  S +WPQW++ I +EM        + +VE P+   V+ ++ VF+ K + +G+IE YK RLVAQGF Q+ GI + ++ +P    ASIR++L   A   W V Q+DV   YL AD+EE+I+++ P  +A     + V L + A+YGL  +G  W K+    L+  G  RS  + C                             AV     ++   F + DLGE  + LG  +R DR A TL   Q  YI  ++  F +       T + P    G  LS    P T  E E+MR
Sbjct:  965 EAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKEHWVCLLRHAIYGLKQSGRQWFKKMCAALDEMGLSRSLVDHCVFYLDEDDDSVTLIIALSVDDTTIAGTNNAVLWFKTEISKRFEMTDLGEMHWILGIEVRRDRAARTLSLSQRAYIDGLMARFNLEDAKPLSTPLEP----GAILSIRQCPSTPREFEDMR 1256          
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 7.200e-34
Identity = 79/259 (30.50%), Postives = 129/259 (49.81%), Query Frame = 0
Query:   13 WKREIAREMDGQTARGVWQVVE-RPKAKTVLSTRVVFKRKIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTPAQASIRMVLNTIAALGWKVRQLDVGMVYLEADVEEDIYVELPEAYLDSRNQVGLRKKAMYGLVHAGLLWSKQFGIELEAKGFQRSQANPC------------------------------EQAVRDLCSCFPIKDLGEASYYLGCHIRWDRNAGTLKFDQHQYIQTVVESFGVTKTSIVPSAAG 240
            W++ +  E DG    G +  V+  P+ +  +S++  F  K + DG+IEK+K RLVA+GF Q+  + Y  SSSP P+ ASI+++L        K+   DV   +  A ++ED+++ LP    +  ++V   ++A+YGL  +G  W       L   GF++ +A+PC                              ++ +  L   FP KDLGE  ++ GC +  D  AGTL+  Q  YI ++V  F V  TS +P++ G
Sbjct:   15 WEQAMREEFDGHLGTGTFSFVDGTPEGRRPVSSKWRFTWKTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPG 273          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76085.15288.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401H6Z2_9APHY1.440e-3733.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A3JRZ2_9STRA3.250e-3734.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1Y1M2G6_PHOPY1.700e-3633.58Uncharacterized protein n=1 Tax=Photinus pyralis T... [more]
A0A2R6PCF8_9APHY1.730e-3632.65Uncharacterized protein n=1 Tax=Hermanssonia centr... [more]
A0A0C2WN23_AMAMK5.890e-3631.21Integrase catalytic domain-containing protein (Fra... [more]
A0A6A3GX66_9STRA1.570e-3436.19Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y9XTU1_9APHY3.170e-3435.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A4CLK4_9STRA3.570e-3433.68Retrovirus-related Pol polyprotein from transposon... [more]
A0A401GQU1_9APHY5.900e-3432.77Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A6H5JCG0_9PHAE7.200e-3430.50Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 29..173
e-value: 8.3E-32
score: 110.7
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 7..169
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 7..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig76085contigH-elongata_contig76085:959..1834 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig76085.15288.1mRNA_H-elongata_contig76085.15288.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig76085 809..1846 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig76085.15288.1 ID=prot_H-elongata_contig76085.15288.1|Name=mRNA_H-elongata_contig76085.15288.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=261bp
MGEAQASSEWPQWKREIAREMDGQTARGVWQVVERPKAKTVLSTRVVFKR
KIDNDGRIEKYKCRLVAQGFRQVKGIHYKESSSPTPAQASIRMVLNTIAA
LGWKVRQLDVGMVYLEADVEEDIYVELPEAYLDSRNQVGLRKKAMYGLVH
AGLLWSKQFGIELEAKGFQRSQANPCEQAVRDLCSCFPIKDLGEASYYLG
CHIRWDRNAGTLKFDQHQYIQTVVESFGVTKTSIVPSAAGGKALSKSDSP
QTDAEVEEMR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like