prot_H-elongata_contig7567.15256.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7567.15256.1
Unique Nameprot_H-elongata_contig7567.15256.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length84
Homology
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: D8LJG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG5_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 1.680e-38
Identity = 66/77 (85.71%), Postives = 75/77 (97.40%), Query Frame = 0
Query:    1 LARLAQASKLDRLSATGRFGLGFNSVYHFTDVPSFVSGEHLVIFDPHTKYVPGATSVQPGIKIRFAETDLLEQFPDQ 77
            LA++ QASKLD+L+ATGRFGLGFN+VYHFTD+PSFVSGEHLV+FDPHTKYVPGAT VQPGIKIRFA+TDLL+QFPDQ
Sbjct: 1133 LAKIGQASKLDKLAATGRFGLGFNAVYHFTDLPSFVSGEHLVMFDPHTKYVPGATHVQPGIKIRFADTDLLDQFPDQ 1209          
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: A0A6H5K688_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K688_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 2.440e-36
Identity = 63/71 (88.73%), Postives = 70/71 (98.59%), Query Frame = 0
Query:    7 ASKLDRLSATGRFGLGFNSVYHFTDVPSFVSGEHLVIFDPHTKYVPGATSVQPGIKIRFAETDLLEQFPDQ 77
            ASKLD+L+ATGRFGLGFN+VYHFTD+PSFVSGEHLV+FDPHTKYVPGAT VQPGIKIRFA+TDLL+QFPDQ
Sbjct:  478 ASKLDKLAATGRFGLGFNAVYHFTDLPSFVSGEHLVMFDPHTKYVPGATHVQPGIKIRFADTDLLDQFPDQ 548          
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: W7U1E4_9STRA (Ubiquitin-associated/translation elongation factor EF1B n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1E4_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.290e-31
Identity = 57/77 (74.03%), Postives = 67/77 (87.01%), Query Frame = 0
Query:    1 LARLAQASKLDRLSATGRFGLGFNSVYHFTDVPSFVSGEHLVIFDPHTKYVPGATSVQPGIKIRFAETDLLEQFPDQ 77
            +AR+ QASKLD+ ++TGRFGLG N+VYH TD+PSFVSGEHLVIFDPH K++PGAT  QPGIKIRF +TDLL QFP Q
Sbjct: 1765 IARIGQASKLDKQNSTGRFGLGVNAVYHSTDLPSFVSGEHLVIFDPHVKFLPGATRQQPGIKIRFVDTDLLSQFPHQ 1841          
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: A0A835YL62_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL62_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.290e-31
Identity = 56/77 (72.73%), Postives = 68/77 (88.31%), Query Frame = 0
Query:    1 LARLAQASKLDRLSATGRFGLGFNSVYHFTDVPSFVSGEHLVIFDPHTKYVPGATSVQPGIKIRFAETDLLEQFPDQ 77
            LAR+ QASKLD+++ TGRFGLGFN+VYHFTD+PSFV+G+  V+FDPHT YVPGATS QPGIK+RF ++DLL QF DQ
Sbjct: 1771 LARIGQASKLDKVATTGRFGLGFNAVYHFTDLPSFVTGDFCVMFDPHTAYVPGATSQQPGIKVRFTDSDLLAQFEDQ 1847          
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: A0A7S2VVU2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VVU2_9STRA)

HSP 1 Score: 123 bits (308), Expect = 8.330e-31
Identity = 54/77 (70.13%), Postives = 68/77 (88.31%), Query Frame = 0
Query:    1 LARLAQASKLDRLSATGRFGLGFNSVYHFTDVPSFVSGEHLVIFDPHTKYVPGATSVQPGIKIRFAETDLLEQFPDQ 77
            L+++ QASKLD+L  TGRFGLGFNSV+H+TDVPSFV+G+HLV+FDPH KYVPG+TS   G+KI+F+ +DLL QFPDQ
Sbjct: 1190 LSKIGQASKLDKLITTGRFGLGFNSVFHWTDVPSFVTGDHLVMFDPHEKYVPGSTSTSRGLKIKFSSSDLLSQFPDQ 1266          
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: A0A7S1Z3D5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z3D5_9STRA)

HSP 1 Score: 115 bits (288), Expect = 3.160e-30
Identity = 51/77 (66.23%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 LARLAQASKLDRLSATGRFGLGFNSVYHFTDVPSFVSGEHLVIFDPHTKYVPGATSVQPGIKIRFAETDLLEQFPDQ 77
            LA++ Q SK+++L  TGRFGLGFN+VYH+TDVPS VSG++LV FDPH K VPGA+S  PGIK+RF+ T L  QFPDQ
Sbjct:   25 LAKIGQGSKMEKLETTGRFGLGFNNVYHWTDVPSIVSGDYLVFFDPHAKSVPGASSASPGIKVRFSNTSLKGQFPDQ 101          
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: A0A7S0JDR5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JDR5_9EUKA)

HSP 1 Score: 112 bits (279), Expect = 4.610e-30
Identity = 48/74 (64.86%), Postives = 62/74 (83.78%), Query Frame = 0
Query:    4 LAQASKLDRLSATGRFGLGFNSVYHFTDVPSFVSGEHLVIFDPHTKYVPGATSVQPGIKIRFAETDLLEQFPDQ 77
            ++ ++KL+  SATGRFGLGFN+VYHFTDVPSFVSGEH+V FDPH  ++PGAT   PG+K++FA  + +EQFPDQ
Sbjct:    1 ISSSAKLNASSATGRFGLGFNAVYHFTDVPSFVSGEHVVFFDPHAHFLPGATLQNPGLKLKFAGANFVEQFPDQ 74          
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: A0A7S0QTY4_9CRYP (Hypothetical protein (Fragment) n=2 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QTY4_9CRYP)

HSP 1 Score: 116 bits (290), Expect = 2.230e-29
Identity = 50/77 (64.94%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 LARLAQASKLDRLSATGRFGLGFNSVYHFTDVPSFVSGEHLVIFDPHTKYVPGATSVQPGIKIRFAETDLLEQFPDQ 77
            L ++ Q SK+D L  TG+FGLGFN+VYHFTD+PSFVSGE+LV FDPHTKY+PGAT   PG++I+F   ++L QFPDQ
Sbjct:   71 LTKIGQGSKIDCLGKTGKFGLGFNAVYHFTDLPSFVSGEYLVYFDPHTKYLPGATVQHPGLRIKFTRNNILSQFPDQ 147          
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: C1N0V2_MICPC (Predicted protein n=4 Tax=Micromonas pusilla TaxID=38833 RepID=C1N0V2_MICPC)

HSP 1 Score: 118 bits (295), Expect = 4.750e-29
Identity = 51/77 (66.23%), Postives = 67/77 (87.01%), Query Frame = 0
Query:    1 LARLAQASKLDRLSATGRFGLGFNSVYHFTDVPSFVSGEHLVIFDPHTKYVPGATSVQPGIKIRFAETDLLEQFPDQ 77
            +AR+ Q SK+DR +A GRFGLGFN++YHFTD+PSFVSGE+LV+FDPH  ++PGAT+ +PG+KI FA++ LL QFPDQ
Sbjct: 1558 IARIGQDSKVDRPAAAGRFGLGFNAIYHFTDLPSFVSGEYLVMFDPHATHLPGATAARPGLKIAFADSPLLRQFPDQ 1634          
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Match: A0A7S3QAL4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QAL4_9STRA)

HSP 1 Score: 117 bits (294), Expect = 6.480e-29
Identity = 52/77 (67.53%), Postives = 66/77 (85.71%), Query Frame = 0
Query:    1 LARLAQASKLDRLSATGRFGLGFNSVYHFTDVPSFVSGEHLVIFDPHTKYVPGATSVQPGIKIRFAETDLLEQFPDQ 77
            LA++ QASKL++LS TGRFGLGFNSV+H+TDVPS VSG++LV+FDPH +YVPGA+ +  G+KIRF  T+L  QFPDQ
Sbjct: 1551 LAKIGQASKLEKLSTTGRFGLGFNSVFHWTDVPSIVSGDYLVMFDPHARYVPGASDMSRGMKIRFTHTELASQFPDQ 1627          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7567.15256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJG5_ECTSI1.680e-3885.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K688_9PHAE2.440e-3688.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7U1E4_9STRA1.290e-3174.03Ubiquitin-associated/translation elongation factor... [more]
A0A835YL62_9STRA1.290e-3172.73RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S2VVU2_9STRA8.330e-3170.13Hypothetical protein (Fragment) n=1 Tax=Triparma p... [more]
A0A7S1Z3D5_9STRA3.160e-3066.23Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S0JDR5_9EUKA4.610e-3064.86Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A7S0QTY4_9CRYP2.230e-2964.94Hypothetical protein (Fragment) n=2 Tax=Cryptomona... [more]
C1N0V2_MICPC4.750e-2966.23Predicted protein n=4 Tax=Micromonas pusilla TaxID... [more]
A0A7S3QAL4_9STRA6.480e-2967.53Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15600:SF42coord: 2..77
NoneNo IPR availablePANTHERPTHR15600FAMILY NOT NAMEDcoord: 2..77
IPR036890Histidine kinase/HSP90-like ATPase superfamilySUPERFAMILY55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 3..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7567contigH-elongata_contig7567:9046..9810 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7567.15256.1mRNA_H-elongata_contig7567.15256.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7567 6840..9810 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7567.15256.1 ID=prot_H-elongata_contig7567.15256.1|Name=mRNA_H-elongata_contig7567.15256.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp
LARLAQASKLDRLSATGRFGLGFNSVYHFTDVPSFVSGEHLVIFDPHTKY
VPGATSVQPGIKIRFAETDLLEQFPDQARAPHY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036890HATPase_C_sf