prot_H-elongata_contig75627.15245.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75627.15245.1
Unique Nameprot_H-elongata_contig75627.15245.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length380
Homology
BLAST of mRNA_H-elongata_contig75627.15245.1 vs. uniprot
Match: D8LJE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE2_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 2.120e-35
Identity = 152/412 (36.89%), Postives = 180/412 (43.69%), Query Frame = 0
Query:    4 QELIAAADAEGIVRTYRPVSPLIRPRDRDRDETGPPLEAMAATSTAPRAFELVVECRLGAPTVSCYFALRRXXXXXXXXXAYMVGEEEKQSPRTRQGQRQPHPKTDEVLRVCSRDGKLRVWPVGSLPTHPIRVAPPPEQPQATSASPSFSRDGGGGPRPLTGGT------------------MLTSSLTVAAAAVNDLDNLDPAYRQDVSEDEEAREILENVVGVDGEAWRGGGGRV---IARGEAPLSGTRPATPRRVSFAAAEQVYRIEDPWGDADGPWPRGHPAEEFEFDG-------------ELEGPXXXXXXXXXXXXXXXXRP-RRLRQTWGQSPRASTSTSAGEGARSGRSTGSDGRIGEEESDRVFVTPSRLQEASLCSTAVEQAALERRMREVREGRRVHQP 380
            QELIAA DA GIVRTYRP+ P     D +  +  PP  A AA +   R FELVVECRLGA  VSC F                VG E                   EVLR C+  G LR+WP  SLPT P+R  PPP    A +  P +       P P   GT                          A AA  + +N DP+         +A+     +VGV G    G GG      ARGE PL   RPA PRRVSFA A+QVY++EDP+  +                              EL  P XXXX            P RRLRQTWG      TS S+  G+R+ R + +D        D  FV PSR+QE SL STA EQA LERRM E  +G  V +P
Sbjct:  260 QELIAATDAAGIVRTYRPLLPRGGSTDNNPSDGAPPTAAAAAEA---RRFELVVECRLGARPVSCEFGSGPRGVESGGDRRRGVGGE------------------GEVLRTCTARGVLRLWPTASLPTRPMR--PPPSS--APTRLPDYHEALAPLPHPSNAGTDXXXXXXXXXXXXXXXXXXXXXXXXXAMAAGTEQENRDPSDPFSRWTAIDAKGRGPGLVGVGG----GEGGEEEEPSARGEPPLPKARPAAPRRVSFAPADQVYKLEDPYYGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELGAPRXXXXAPTPMRASGATGPPRRLRQTWG------TSASSPRGSRARRGSSTDA-----SDDASFVAPSRMQEPSLWSTAAEQAELERRMTEEFDGSGVPEP 631          
BLAST of mRNA_H-elongata_contig75627.15245.1 vs. uniprot
Match: A0A6H5L2I0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2I0_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 2.350e-27
Identity = 158/387 (40.83%), Postives = 182/387 (47.03%), Query Frame = 0
Query:    4 QELIAAADAEGIVRTYRPVSPLIRPRDRDRDETGPPLEAMAATSTAPRAFELVVECRLGAPTVSCYFALRRXXXXXXXXXAYMVGEEEKQSPRTRQGQRQPHPKTDEVLRVCSRDGKLRVWPVGSLPTHPIRVAPP--------PEQPQATSASPSFSR---DGGGGPRPLTGGTMLTSSLTVAAAAVNDLDNLDPAYRQDVSEDEEAREILENVVGVDGEAWRGGGGRVIARGEAPLSGTRPATPRRVSFAAAEQVYRIEDPW-GDADGPWPRGHPAEEFEFDGELEGPXXXXXXXXXXXXXXXXR--------PRRLRQTWGQSPRASTSTSAGEGARSGRSTGSDGRIGEEESDRVFVTPSRLQEASLCSTAVEQAALERRMRE 370
            QELIAA DA GIVRTYRP+ P     D +  +  PP  A AA +   R FELVVECRLGA  V        XXXXXXXXX  + GE                    EVLR C+  G LR+W   SLPT P+R  PP        P+  +A +  P  S    D                          + +N DP+     S   +A      VVGV G   RG    + ARGE PL   RPA PRRVSFA A+QVY++EDP+ G  +                     XXXXXXXXXXXXXXXX         P RLRQTWG      TSTS+    R+ R    D       SD  FV PSR+QE SL STA EQ  LERRM E
Sbjct:  242 QELIAATDAAGIVRTYRPLLPRRVSTDNNPGDGAPPTTAAAAEA---RRFELVVECRLGARPVXXXXXXXXXXXXXXXXXXXVGGE-------------------GEVLRTCTARGILRLWLTASLPTRPMR--PPXXSAPTRLPDDHEALAPLPHTSNAGTDSSXXXXXXXXXXXXXXXXXXXXXVGAEQENRDPSDPFSRSTAIDATGSGSGVVGVGG-GERGEEVELTARGEPPLPKARPAAPRRVSFAPADQVYKLEDPYYGSGNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRASGANGTPGRLRQTWG------TSTSSPRSNRARRGCSMDA------SDDAFVAPSRMQEPSLWSTAAEQVELERRMTE 591          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75627.15245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJE2_ECTSI2.120e-3536.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2I0_9PHAE2.350e-2740.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75627contigH-elongata_contig75627:28..1892 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75627.15245.1mRNA_H-elongata_contig75627.15245.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75627 28..1892 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75627.15245.1 ID=prot_H-elongata_contig75627.15245.1|Name=mRNA_H-elongata_contig75627.15245.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=380bp
MYFQELIAAADAEGIVRTYRPVSPLIRPRDRDRDETGPPLEAMAATSTAP
RAFELVVECRLGAPTVSCYFALRRKKEEEEKEEAYMVGEEEKQSPRTRQG
QRQPHPKTDEVLRVCSRDGKLRVWPVGSLPTHPIRVAPPPEQPQATSASP
SFSRDGGGGPRPLTGGTMLTSSLTVAAAAVNDLDNLDPAYRQDVSEDEEA
REILENVVGVDGEAWRGGGGRVIARGEAPLSGTRPATPRRVSFAAAEQVY
RIEDPWGDADGPWPRGHPAEEFEFDGELEGPRPPPPAPTPAPGSGSTRPR
RLRQTWGQSPRASTSTSAGEGARSGRSTGSDGRIGEEESDRVFVTPSRLQ
EASLCSTAVEQAALERRMREVREGRRVHQP
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