prot_H-elongata_contig7543.15228.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7543.15228.1
Unique Nameprot_H-elongata_contig7543.15228.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length472
Homology
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BLAST of mRNA_H-elongata_contig7543.15228.1 vs. uniprot
Match: D7G6B1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6B1_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 3.170e-64
Identity = 161/397 (40.55%), Postives = 226/397 (56.93%), Query Frame = 0 
Query:   94 FVQPATAQGFGFPPMQNSLGNFFQ-------ANPFGFS---PGVLGRPAGVQDGRYFVEHALPRPLTSSSGGGSSGVPVQA--RVRVRENTPAEEIKEEP-DTLYPTQEELSSVEILRSHGLDVDEAVRFLRQNGHNLQAAIQQAMETVTNRSDWHLEDRVRLESEKEKDRVAAQRRQDDMSLTVVGDIVPRFRESLLLDEKEGCAPFRRAVRQVSKGKEGWAPALSAFREKAVKLLFLEQKSVRWYRQNISQVRGYFRQVITRLEDFVQNRNTQ------TRGDGEAAEGKSGVEMPVFTGKANGNGANSDHDNEADTIKGSEFLTSCLHSEIEALEKILFMLPSTAGGVPDAFL-KCNDHTATLETDGIEEICHESADVSRSRRSSKRLVIALDD 470
            F  PA   G GF  M    G F Q       ANPF ++   P  L   AG+ + R+    A+     SS+GG SSG P +A  R RVRE   A+E+KEEP D L P  EE+  V++LR HG++  +AV  LRQ+G+ +  A++ AME    R +    D  R+ESEKEKDR A Q++++D  L V+G+++P F +S+LL+ ++GC  FR+ V ++S G     P L  FRE A+ LLFLE+ + R Y +N  Q+R YF ++I R+++    R T+      ++G  E A+  S  E      +AN  G +S+ D E      +E LT+ +  E+EAL  IL+  P T GGVPDAFL K   H+ATLE DG+EE      D SRS RS   +VI +DD
Sbjct:   10 FAMPA-GPGAGF--MFQQQGAFAQHLQASGGANPFVYAAAAPQALPHAAGL-NARFLAGSAMAHSGASSAGGASSGAPQRASPRARVREGPSAQEVKEEPEDPLRPRPEEVGMVDMLRRHGVNTPDAVHCLRQSGNRVDVALRYAMEMKNTRHENRQTDMARVESEKEKDRAAEQQQEEDKILMVLGEVIPHFPKSILLNAEDGCTTFRQFVERLSAGD----PKLCDFRETAITLLFLERDAFRHYPENDRQIREYFGKLIERIQNHFTGRQTEEVEGASSQGGTETAKRSSSCEREP---RANRCGDSSERDEE------TESLTARVREEVEALRSILYGFPKTPGGVPDAFLDKQAAHSATLERDGVEE----DHDHSRSARSEDPVVIDVDD 385
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7543.15228.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6B1_ECTSI3.170e-6440.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 186..228
score: 8.74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7543contigH-elongata_contig7543:5020..8189 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7543.15228.1mRNA_H-elongata_contig7543.15228.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7543 4782..8294 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7543.15228.1 ID=prot_H-elongata_contig7543.15228.1|Name=mRNA_H-elongata_contig7543.15228.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=472bp
MPKRKAEVNGREKSPRLPPPPPSHDEDDSDFCEIIEAPPKAAALVPSSIP
PQRSAVASPLTPAPLSDIFYQNLNSHRDHASMSSFAGLTQEMPFVQPATA
QGFGFPPMQNSLGNFFQANPFGFSPGVLGRPAGVQDGRYFVEHALPRPLT
SSSGGGSSGVPVQARVRVRENTPAEEIKEEPDTLYPTQEELSSVEILRSH
GLDVDEAVRFLRQNGHNLQAAIQQAMETVTNRSDWHLEDRVRLESEKEKD
RVAAQRRQDDMSLTVVGDIVPRFRESLLLDEKEGCAPFRRAVRQVSKGKE
GWAPALSAFREKAVKLLFLEQKSVRWYRQNISQVRGYFRQVITRLEDFVQ
NRNTQTRGDGEAAEGKSGVEMPVFTGKANGNGANSDHDNEADTIKGSEFL
TSCLHSEIEALEKILFMLPSTAGGVPDAFLKCNDHTATLETDGIEEICHE
SADVSRSRRSSKRLVIALDDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015940UBA