prot_H-elongata_contig75407.15226.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75407.15226.1
Unique Nameprot_H-elongata_contig75407.15226.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length194
Homology
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BLAST of mRNA_H-elongata_contig75407.15226.1 vs. uniprot
Match: D7FMH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH3_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 5.690e-23
Identity = 71/149 (47.65%), Postives = 83/149 (55.70%), Query Frame = 0 
Query:   54 AFEDYDEEEVAALEAYMKTHPAKEDEREALRKRAKELSARIGTSPQARAMPQGQRGTHGGRQAAKSPEPEAGEGKNRRYAT----EEQLEYTDSSGKLKFNKRPVGPLAA-----TERVGTRDKKKTKRTKLAKLSNAKLLSFGDNDDG 193
            AFEDYDEEEVAALEAYMKTHP+KE+++EALRKRA+ELSA IG+   + A         GGR A  +                   EE +EYTD+SGKLKFNKRPV   A                          SNAKLLSFGD++DG
Sbjct:   38 AFEDYDEEEVAALEAYMKTHPSKEEDKEALRKRARELSASIGSGQGSEAK--------GGRTAGGNXXXXXXXXXXXXXXXXXXXEEPIEYTDASGKLKFNKRPVSAAAGGXXXXXXXXXXXXXXXXXXXXXXXXSNAKLLSFGDDEDG 178
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BLAST of mRNA_H-elongata_contig75407.15226.1 vs. uniprot
Match: A0A6H5KEF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEF2_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 5.320e-12
Identity = 35/43 (81.40%), Postives = 41/43 (95.35%), Query Frame = 0 
Query:   54 AFEDYDEEEVAALEAYMKTHPAKEDEREALRKRAKELSARIGT 96
            AFEDYDEEEVAALEAYMKTHP+KE+++EALRKRA+ELS  IG+
Sbjct:  102 AFEDYDEEEVAALEAYMKTHPSKEEDKEALRKRARELSVSIGS 144
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75407.15226.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMH3_ECTSI5.690e-2347.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEF2_9PHAE5.320e-1281.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 73..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75407contigH-elongata_contig75407:1029..2142 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75407.15226.1mRNA_H-elongata_contig75407.15226.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75407 1029..2142 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75407.15226.1 ID=prot_H-elongata_contig75407.15226.1|Name=mRNA_H-elongata_contig75407.15226.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp
LEEEVFSGGGEPNEGARAGSGSNIGGSSSATAGVGKGSPQDQGRRPGGAG
SGEAFEDYDEEEVAALEAYMKTHPAKEDEREALRKRAKELSARIGTSPQA
RAMPQGQRGTHGGRQAAKSPEPEAGEGKNRRYATEEQLEYTDSSGKLKFN
KRPVGPLAATERVGTRDKKKTKRTKLAKLSNAKLLSFGDNDDG*
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