prot_H-elongata_contig75291.15212.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75291.15212.1
Unique Nameprot_H-elongata_contig75291.15212.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
[Close]
BLAST of mRNA_H-elongata_contig75291.15212.1 vs. uniprot
Match: B9WZI2_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=23 Tax=Sargassaceae TaxID=3014 RepID=B9WZI2_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 8.880e-19
Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 0 
Query:    1 PSLGIHQSDSPWGLPLLNTFILLSSGTSVTWAHHAILSGYKKDALQGLIVTII 53
            P  GI ++ SPWGLPLLNT ILLSSG SVTWAHHAI+ G+KKDAL GL++TII
Sbjct:   44 PPAGI-EAISPWGLPLLNTIILLSSGASVTWAHHAIVGGFKKDALLGLVITII 95
[Close]
BLAST of mRNA_H-elongata_contig75291.15212.1 vs. uniprot
Match: A0A8A8GQC0_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=1 Tax=Sargassum ilicifolium var. acaraeocarpum TaxID=1674022 RepID=A0A8A8GQC0_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 9.480e-19
Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 0 
Query:    1 PSLGIHQSDSPWGLPLLNTFILLSSGTSVTWAHHAILSGYKKDALQGLIVTII 53
            P  GI ++ SPWGLPLLNT ILLSSG SVTWAHHAI+ G+KK+AL GLI+TII
Sbjct:   36 PPAGI-EAISPWGLPLLNTIILLSSGASVTWAHHAIVGGFKKEALVGLIITII 87
[Close]
BLAST of mRNA_H-elongata_contig75291.15212.1 vs. uniprot
Match: A0A894K0S9_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=1 Tax=Sargassum aquifolium TaxID=548576 RepID=A0A894K0S9_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 1.240e-18
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0 
Query:    1 PSLGIHQSDSPWGLPLLNTFILLSSGTSVTWAHHAILSGYKKDALQGLIVTII 53
            P  GI ++ SPWGLPLLNT ILLSSG SVTWAHHAI+ G+KK+AL GL++TII
Sbjct:   36 PPAGI-EAISPWGLPLLNTIILLSSGASVTWAHHAIVGGFKKEALLGLVITII 87
[Close]
BLAST of mRNA_H-elongata_contig75291.15212.1 vs. uniprot
Match: W5XK28_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=16 Tax=Sargassaceae TaxID=3014 RepID=W5XK28_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 2.080e-18
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0 
Query:    1 PSLGIHQSDSPWGLPLLNTFILLSSGTSVTWAHHAILSGYKKDALQGLIVTII 53
            P  GI ++ SPWGLPLLNT ILLSSG SVTWAHHAI+ G+KK+AL GL++TII
Sbjct:   29 PPAGI-EAISPWGLPLLNTIILLSSGASVTWAHHAIVGGFKKEALLGLVITII 80
[Close]
BLAST of mRNA_H-elongata_contig75291.15212.1 vs. uniprot
Match: W5XK19_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=1 Tax=Sargassum aquifolium TaxID=548576 RepID=W5XK19_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 2.080e-18
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0 
Query:    1 PSLGIHQSDSPWGLPLLNTFILLSSGTSVTWAHHAILSGYKKDALQGLIVTII 53
            P  GI ++ SPWGLPLLNT ILLSSG SVTWAHHAI+ G+KK+AL GL++TII
Sbjct:   29 PPAGI-EAISPWGLPLLNTIILLSSGASVTWAHHAIVGGFKKEALLGLVITII 80
[Close]
BLAST of mRNA_H-elongata_contig75291.15212.1 vs. uniprot
Match: A0A0H4CTW1_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=1 Tax=Turbinaria decurrens TaxID=127558 RepID=A0A0H4CTW1_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 2.290e-18
Identity = 37/53 (69.81%), Postives = 45/53 (84.91%), Query Frame = 0 
Query:    1 PSLGIHQSDSPWGLPLLNTFILLSSGTSVTWAHHAILSGYKKDALQGLIVTII 53
            P  GI ++ SPWGLPLLNT ILLSSG SVTWAHHAI+ G+KK+AL GL++TI+
Sbjct:   39 PPAGI-EAISPWGLPLLNTIILLSSGASVTWAHHAIVGGFKKEALLGLVITIV 90
[Close]
BLAST of mRNA_H-elongata_contig75291.15212.1 vs. uniprot
Match: I6TIF7_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=11 Tax=Sargassaceae TaxID=3014 RepID=I6TIF7_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 3.090e-18
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0 
Query:    1 PSLGIHQSDSPWGLPLLNTFILLSSGTSVTWAHHAILSGYKKDALQGLIVTII 53
            P  GI ++ SPWGLPLLNT ILLSSG SVTWAHHAI+ G+KK+AL GLI+T+I
Sbjct:   26 PPAGI-EAISPWGLPLLNTIILLSSGASVTWAHHAIVGGFKKEALVGLIITVI 77
[Close]
BLAST of mRNA_H-elongata_contig75291.15212.1 vs. uniprot
Match: I6S9H6_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=12 Tax=Sargassaceae TaxID=3014 RepID=I6S9H6_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 3.160e-18
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0 
Query:    1 PSLGIHQSDSPWGLPLLNTFILLSSGTSVTWAHHAILSGYKKDALQGLIVTII 53
            P  GI ++ SPWGLPLLNT ILLSSG SVTWAHHAI+ G+KK+AL GLI+TI+
Sbjct:   27 PPAGI-EAISPWGLPLLNTIILLSSGASVTWAHHAIVGGFKKEALVGLIITIV 78
[Close]
BLAST of mRNA_H-elongata_contig75291.15212.1 vs. uniprot
Match: A0A068AEL8_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=2 Tax=Sirophysalis trinodis TaxID=1197255 RepID=A0A068AEL8_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 3.690e-18
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0 
Query:    1 PSLGIHQSDSPWGLPLLNTFILLSSGTSVTWAHHAILSGYKKDALQGLIVTII 53
            P  GI ++ SPWGLPLLNT ILLSSG SVTWAHHAI+ G+KK+AL GL++TII
Sbjct:   34 PPAGI-KAISPWGLPLLNTIILLSSGASVTWAHHAIVGGFKKEALLGLVITII 85
[Close]
BLAST of mRNA_H-elongata_contig75291.15212.1 vs. uniprot
Match: A0A068ACI2_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=45 Tax=Sargassaceae TaxID=3014 RepID=A0A068ACI2_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 3.910e-18
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0 
Query:    1 PSLGIHQSDSPWGLPLLNTFILLSSGTSVTWAHHAILSGYKKDALQGLIVTII 53
            P  GI ++ SPWGLPLLNT ILLSSG SVTWAHHAI+ G+KK+AL GL+VTI+
Sbjct:   27 PPAGI-EAISPWGLPLLNTIILLSSGASVTWAHHAIVGGFKKEALLGLVVTIV 78
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75291.15212.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B9WZI2_9PHAE8.880e-1973.58Cytochrome c oxidase subunit 3 (Fragment) n=23 Tax... [more]
A0A8A8GQC0_9PHAE9.480e-1973.58Cytochrome c oxidase subunit 3 (Fragment) n=1 Tax=... [more]
A0A894K0S9_9PHAE1.240e-1871.70Cytochrome c oxidase subunit 3 (Fragment) n=1 Tax=... [more]
W5XK28_9PHAE2.080e-1871.70Cytochrome c oxidase subunit 3 (Fragment) n=16 Tax... [more]
W5XK19_9PHAE2.080e-1871.70Cytochrome c oxidase subunit 3 (Fragment) n=1 Tax=... [more]
A0A0H4CTW1_9PHAE2.290e-1869.81Cytochrome c oxidase subunit 3 (Fragment) n=1 Tax=... [more]
I6TIF7_9PHAE3.090e-1871.70Cytochrome c oxidase subunit 3 (Fragment) n=11 Tax... [more]
I6S9H6_9PHAE3.160e-1871.70Cytochrome c oxidase subunit 3 (Fragment) n=12 Tax... [more]
A0A068AEL8_9PHAE3.690e-1871.70Cytochrome c oxidase subunit 3 (Fragment) n=2 Tax=... [more]
A0A068ACI2_9PHAE3.910e-1871.70Cytochrome c oxidase subunit 3 (Fragment) n=45 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013833Cytochrome c oxidase, subunit III, 4-helical bundleGENE3D1.20.120.80coord: 1..53
e-value: 4.3E-11
score: 44.8
IPR000298Cytochrome c oxidase subunit III-likePFAMPF00510COX3coord: 1..53
e-value: 1.1E-15
score: 58.2
IPR000298Cytochrome c oxidase subunit III-likePROSITEPS50253COX3coord: 1..53
score: 9.726
IPR024791Cytochrome c oxidase subunit IIIPANTHERPTHR11403CYTOCHROME C OXIDASE SUBUNIT IIIcoord: 4..52
NoneNo IPR availablePANTHERPTHR11403:SF7CYTOCHROME C OXIDASE SUBUNIT 3coord: 4..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
IPR035973Cytochrome c oxidase subunit III-like superfamilySUPERFAMILY81452Cytochrome c oxidase subunit III-likecoord: 9..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75291contigH-elongata_contig75291:2836..2994 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75291.15212.1mRNA_H-elongata_contig75291.15212.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75291 2836..2994 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75291.15212.1 ID=prot_H-elongata_contig75291.15212.1|Name=mRNA_H-elongata_contig75291.15212.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
PSLGIHQSDSPWGLPLLNTFILLSSGTSVTWAHHAILSGYKKDALQGLIV
TII
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013833Cyt_c_oxidase_su3_a-hlx
IPR000298Cyt_c_oxidase-like_su3
IPR024791Cyt_c/ubiquinol_Oxase_su3
IPR035973Cyt_c_oxidase_su3-like_sf