prot_H-elongata_contig7516.15196.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7516.15196.1
Unique Nameprot_H-elongata_contig7516.15196.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length923
Homology
BLAST of mRNA_H-elongata_contig7516.15196.1 vs. uniprot
Match: D7FWC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC4_ECTSI)

HSP 1 Score: 288 bits (738), Expect = 2.100e-79
Identity = 338/1015 (33.30%), Postives = 458/1015 (45.12%), Query Frame = 0
Query:    1 GRYETGEEVEGRFEGRSKWFSAKVRRAYAVPLVGLVYDLAYSDGDTEEGVPAQRVRRPGQSSPAFQVGLRVDIKLARKGKGFHPGVIGRVNDDGNLYVKLDDGDAEWGVPPQHVIASYAFTPAPEDSSMREKAASSGSVGA-ISRESGGKLDKMDGG----AKHAPAEPGAEKDAPELRSPGSDARAHQCSKDSATAKHVEPAAVSCTPTIAEGQESES------------------GGLSWIAELANHARGSTTPVSVRPAADGQSRDERGGSK-----------------GLT-MTIAHAHAPAPLSNEGRSTGIREVA-RGVD-STKGFSPSPNLEERLLSPRSSTTRTSSATPTSVQSTL-RDMTPPHLAWKPSKRGTAGRRWGAPPPD------------DTEPEHEGKSHPPRVSGRLGLPAQT------VAPMYVHSTTATLHAAGRENATGPDGKGSPAPIIRKYGENDA-IAE----ACEGTRDSSASETRVSAESVQPPWRQRSVDEAETTGS--RSREPDSEHSRGDKEIVLALKEETECGQARTPTYSTSIGGT-PDTDGRSDMVRPQPVEKGRSNSSAATGSSSMGEADKTDRAGGNRLQDLRVSVQRGYAADAVHLSEEVRMLKAKLKMADDSAQVKLTQQALELKKQMREAVERERAKASGMLSGERAACARRIIALREEVTAVKRRFFEQERRPEARATATVFENQMTLDKQRHKRSTMICPACG--------RGTFRA-TPRKKHAEDHVHGT----RSKSDHKVEKRLIYGGSRGKTECLPPPPSPLSPRLVVTNP-------SHADETIGNAIVAFSEASRSVGSLSAAAAVTVVSAPAEEDSPASKTLERLLLERVASR------DESIRALTVRLEQLEERHGELSTSDGRRVQQASESDRKYLDASIPNTPRGYIYPSKTRDVQAAEAQRIAETFRRRLAREKRESRRRLETMKEEVDRVVRQFQARAGRAEAAAASAEERARFTALRHFPAK 919
            GRY+  + VE RF GRSKWF  KVRRAY      L+YD+ + DGD EEGV A RVRRPGQ  PA + GL VD+KLARKGKG+HPG IGRVNDDG+LYVKLDDGD+EW +P Q  I  Y +TP+   ++     AS G V A  +R+   + +  D        ++ +   AE D P      ++ R HQ S  S  +    P  +S + +   G E +S                   G+SWIA+LA       TP       D  +R + GG +                 GL  +T   +    P + E  S+G    A RG   +T   SP P  +   ++P         +TP + +S   R +TP HL WKP   G+A RRWGAPPP+             T+   +  + PPR+S     P  T       AP+     + +           P G+  P       GE++A IA     A +G R      T   A    P    R  D+A T  S   S    +E+  G ++        T+   A +   S S+  T P   G + +  P   +KG      A G S  G        G +R   +R SVQR YAA+A+HLSEEVR+L AKL  A+D  Q +L QQ  +L +QM E ++RER K   +LS ERA+ ARRI  L+ EV A +R+  E ERR   +A +T    Q  L  +R K S  +    G        RGT  +  P    A D    T    RS S  +V +   +G S        PP   LS  L  T P       S A  + G     FSE    +G  S++    +    +       K +E L LE +         + S            +R GE     G        S+ +  +   P  PR        R+   ++  R  +  R RL  E+R++RRRLE MK EV+RVV QF+ARA RAEAAAASAE+RA+  ALR+  +K
Sbjct:   47 GRYQPHDTVEARFGGRSKWFPGKVRRAYEGREGRLLYDVDFDDGDEEEGVLAGRVRRPGQGPPALRAGLVVDVKLARKGKGYHPGTIGRVNDDGSLYVKLDDGDSEWSLPAQQAIPIYPYTPSVGGTNT---GASDGQVEARAARDENSRAEPHDDADDQLGPNSTSPRAAENDQPASSDRSNNTRGHQASAASTASG---PLPLSSSSSFDGGAEKQSXXXXXXXXXXXXKSDQSGSGISWIADLAKSVE---TPTPAAQLPDPAARTDAGGKRSEAGDDSGNRGXXXXXSGLDWITELVSPLAQPSARESSSSGGEASAERGPPVATGNLSPVPITQTPAVAPDRGP-----STPVATKSRPPRAVTPSHLEWKPITDGSAKRRWGAPPPEVDADKSKGGEETKTQQRQQLPNSPPRLSRSTAAPDSTRSLSTDAAPLADAPASRSATRVSAPKIALPAGQQEPKAKTNVGGESNASIASTDTIASQGARSGGRPPTVPVAGGRTPGPEVRERDDANTQHSCDASGGATAENLGGSQDNQGTEMHATQQEGAASFESSGSVNATVPLPGGGAQIALPSVQKKG-----VAEGQSVRG--------GSSRWDIIRSSVQRRYAAEAMHLSEEVRLLTAKLAAAEDKTQARLVQQERKLVRQMDEVLKRERDKMQALLSEERASSARRINTLKGEVDAARRQL-ELERRRSEKAASTG--GQAILSGRRAKTSPPLHHTTGSVRGREKTRGTVSSYEPAHCEAPDRSASTVRRPRSSSSARVSRTGPWGLSDRDAGRRCPPXXXLS--LATTCPDSGRKASSAASASEGARRTIFSER---LGHTSSSVLSPLSCGGSGGGGSDGKGVEYLALENILRNVLATVAEPSSSXXXXXXXXXRKRDGEQEERSG--------SEGEAFEELAPPPPRQRERAPAHRERAVSDGHR-EQASRWRLETERRDTRRRLEAMKGEVERVVGQFRARAERAEAAAASAEQRAKVKALRYLRSK 1017          
BLAST of mRNA_H-elongata_contig7516.15196.1 vs. uniprot
Match: A0A6H5K1V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V4_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 2.170e-62
Identity = 326/1083 (30.10%), Postives = 444/1083 (41.00%), Query Frame = 0
Query:    1 GRYETGEEVEGRFEGRSKWFSAKVRRAYAVPLVGLVYDLAYSDGDTEEGVPAQRVRRPGQSSPAFQVGLRVDIKLARKGKGFHPGVIGRVNDDGNLYVKLDDGDAEWGVPPQHVIASYAFTPAPEDSSMREKAASSGSVGAISRESGGKLDKMDGGAKHAP-AEPGAEKDAPELRSPGSDA--RAHQCSKDSATAKHVEPAAV--------------------------------------SCTPTIAEGQESESG-GLSWIAELANHARGSTTPVSVRPAA--------------DGQSRDERGGSKGLT-MTIAHAHAPAPLSNEGRSTGIREVARGVD--STKGFSPSPNLEERLLSPRSSTTRTSSATPTSVQSTLRDMTPPHLAWKPSKRGTAGRRWGAPPPD-DTEPEHEGKSHPPRVSGRLG-----LPAQTVAPMYVHSTTATLHAAGRENATGPDGKGSPAPIIRKYGEND--AIAEACEGTRDSSASETRVSAESVQPPWRQRSVDEA--ETTGSRSREPDSEHSRGDKEIVLALKEETECGQARTPTYSTSIGGTPDTDGRSDMVRPQPVEKGRSNSSAATGSSSMGEAD-----------------KTDRAGGNRLQDLRVSVQRGYAADAVHLSEEVRMLKAKLKMADDSAQVKLTQQALELKKQMREAVERERAKASGMLSGERAACARRIIALREEVTAVKRRFFEQERRPEARATATVFENQMTLDKQRHKRSTMICPACGRGTFRATPRKKHAEDHVHGTRSKSDHKVEKRLIYGGSRGKTECLPPPPSPLSPRLVVTNPSHADETIGNAIVAFSEASRSVGSLSAAAAVTVVSAPAEEDSPASKTLERLLLERVASR---------------------------DESIRALTVRLEQLEERHGELST------SDGRRVQQASESDRKYLDASIPNTPRGYIYPSKT---------------------------------------RDVQAAEAQRIA------ETFRRRLAREKRESRRRLETMKEEVDRVVRQFQARAGRAEAAAASAEERARFTALRHFPAK 919
            GRY   + VE RF GRSKWF  KVRRAY      L+YD+ + DGD EEGV A RVRRPGQ  P+   GL VDIKLARKGKG+HP  IGRVNDDG+LYVKLDDGD+EW +P Q  I  Y +TP                           LDK + GA     A P + +D      P  DA  +    S     A+ V PA                                        S     AE +  +SG G+SWIA+LA      T    +  +A              D  +RD  GG  GL  +T   +    P + E  S+G    A G    +    SP P  +    + R     T  AT T      R + PPHL WKP   G+A RRWGAPPP+ D +   +GK   P+   +L      L   T AP    S +          A+    + S   I    G+ +  A     +    S  S   +S++  +   R  +V  A   T G   RE D  ++            +  C  A +   + ++GG  D  G ++M+  Q        SS +  ++ +  A+                 ++ R G +R   +R SVQR +AA+A+HLSEEVR+L A+L  A+D  Q +L QQ  +L +QM E ++RER K   +LS ERA+ ARRI AL+ EV A +R+   + RR E   T T     +T   Q+  R   I  A G+   R  P   HA +    TRS        +    G R +T        PL P    T      E     + ++  A  + G     +A T+    +   +  S+T    L +R A R                            E  R  T+  E+L      L +      SDG         D   L+  + N       PS +                                       R+   A  +R        ++ R RL  E+R++RRRLE MK EV+RVV QF+ARA RAEAAAASAE+RA+  ALR+  +K
Sbjct:   47 GRYRPQDAVEARFGGRSKWFPGKVRRAYEGREGRLLYDVDFDDGDEEEGVLAGRVRRPGQRPPSLSAGLVVDIKLARKGKGYHPATIGRVNDDGSLYVKLDDGDSEWSLPAQQAIPIYPYTPP--------------------------LDKTNAGASDGQLAAPESARDENNRAEPHDDADDQIGPNSTSPRAAEDVPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEKQSGQNSDKNXXAEEKSDQSGSGVSWIADLAKSVETPTPVAQLSDSAARTDAGGKRSEAGDDSGNRDGGGGGSGLDWITELVSPLAQPSARESSSSGGEASAEGGPPVAVGNLSPVPITQTPAFA-RGHGPSTPLATKTPPP---RAVKPPHLEWKPITDGSAKRRWGAPPPEVDADKSKDGKETEPQQRQQLPNSPPRLSRSTAAPDSTRSLSTDAAPPADAPASSSAARASAPKIALPAGQREPKATTNVSDEGNASITSTATISSQGARSGGRPSTVPVAGGRTPGPEVREHDDTNT------------QQSC-DASSGATAENLGGLQDNQG-TEMLATQQKGFASFQSSGSVNATVLPPAEGAQIALPPVQKKGVPEGQSVRGGSSRWDIIRSSVQRRFAAEAMHLSEEVRLLTAQLAAAEDKTQARLVQQERKLVRQMDEVLKRERDKMQALLSEERASSARRINALKGEVDAARRQLELERRRSEKVRTGT-----LTTITQKMCRLQPIDQAFGQE--RRFPG--HAPESTT-TRSLRATSSGGQAFLSGRRARTS------PPLDP---TTGSVRGREKTRGTVTSYDPAHEAPGR----SASTMRRPRSTSSARVSRTGPWGLSDRDAERRHPPXXXXXXXXXXXXXXXXXXXXXXASEGARR-TISSERLGHTSPSLLSPLSCGGSDGGGGSDGKGVDYLALENILRNVLATVAEPSSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQRERGPAHTERAVSDGHREQSSRWRLETERRDTRRRLEAMKGEVERVVGQFRARAERAEAAAASAEQRAKVKALRYLRSK 1061          
BLAST of mRNA_H-elongata_contig7516.15196.1 vs. uniprot
Match: A0A7S2WUJ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUJ6_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.840e-14
Identity = 52/124 (41.94%), Postives = 65/124 (52.42%), Query Frame = 0
Query:    3 YETGEEVEGRFEGRSKWFSAKVRRAYAVPLVGLVYDLAYSDGDTEEGVPAQRVRRPGQSSPA----------------FQVGLRVDIKLARKGKGFHPGVIGRVNDDGNLYVKLDDGDAEWGVP 110
            +  G+ VE R+ GRSKWF  KV R   V   G  YD+AY DGD+E GVPA+ VRR G  S                  F+ G RV+ +   + K F  G + RVN DG   +  DDGD+E GVP
Sbjct:   35 FREGDRVEARYRGRSKWFKGKVER---VNRDG-TYDIAYDDGDSERGVPAESVRRVGGGSDRDDRDERRALSPRRDEDFREGDRVEARYRGRSKWFK-GKVERVNRDGTYDIAYDDGDSERGVP 153          
BLAST of mRNA_H-elongata_contig7516.15196.1 vs. uniprot
Match: A0A7S2D1G6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D1G6_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.300e-8
Identity = 37/77 (48.05%), Postives = 46/77 (59.74%), Query Frame = 0
Query:   37 YDLAYSDGDTEEGVPAQRVRRPGQSSP-AFQVGLRVDIKLARKGKGFH--PGVIGRVNDDGNLYVKLDDGDAEWGVP 110
            Y++AY+DGD EEGV   R++RPG  +P A   G+R +   AR G G     GVI + N DG   V  DDGD E GVP
Sbjct:   22 YNIAYADGDQEEGVKRLRIKRPGDQNPKALIAGMRCE---ARHGGGMQCFDGVISQANSDGTFDVDYDDGDREQGVP 95          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7516.15196.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FWC4_ECTSI2.100e-7933.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K1V4_9PHAE2.170e-6230.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WUJ6_9STRA1.840e-1441.94Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2D1G6_9STRA1.300e-848.05Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 851..907
NoneNo IPR availableCOILSCoilCoilcoord: 786..813
NoneNo IPR availableCOILSCoilCoilcoord: 579..600
NoneNo IPR availableGENE3D2.30.30.140coord: 1..59
e-value: 6.0E-9
score: 37.3
NoneNo IPR availableGENE3D2.30.30.140coord: 60..119
e-value: 1.7E-5
score: 26.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7516contigH-elongata_contig7516:4226..8772 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7516.15196.1mRNA_H-elongata_contig7516.15196.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7516 4226..8772 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7516.15196.1 ID=prot_H-elongata_contig7516.15196.1|Name=mRNA_H-elongata_contig7516.15196.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=923bp
GRYETGEEVEGRFEGRSKWFSAKVRRAYAVPLVGLVYDLAYSDGDTEEGV
PAQRVRRPGQSSPAFQVGLRVDIKLARKGKGFHPGVIGRVNDDGNLYVKL
DDGDAEWGVPPQHVIASYAFTPAPEDSSMREKAASSGSVGAISRESGGKL
DKMDGGAKHAPAEPGAEKDAPELRSPGSDARAHQCSKDSATAKHVEPAAV
SCTPTIAEGQESESGGLSWIAELANHARGSTTPVSVRPAADGQSRDERGG
SKGLTMTIAHAHAPAPLSNEGRSTGIREVARGVDSTKGFSPSPNLEERLL
SPRSSTTRTSSATPTSVQSTLRDMTPPHLAWKPSKRGTAGRRWGAPPPDD
TEPEHEGKSHPPRVSGRLGLPAQTVAPMYVHSTTATLHAAGRENATGPDG
KGSPAPIIRKYGENDAIAEACEGTRDSSASETRVSAESVQPPWRQRSVDE
AETTGSRSREPDSEHSRGDKEIVLALKEETECGQARTPTYSTSIGGTPDT
DGRSDMVRPQPVEKGRSNSSAATGSSSMGEADKTDRAGGNRLQDLRVSVQ
RGYAADAVHLSEEVRMLKAKLKMADDSAQVKLTQQALELKKQMREAVERE
RAKASGMLSGERAACARRIIALREEVTAVKRRFFEQERRPEARATATVFE
NQMTLDKQRHKRSTMICPACGRGTFRATPRKKHAEDHVHGTRSKSDHKVE
KRLIYGGSRGKTECLPPPPSPLSPRLVVTNPSHADETIGNAIVAFSEASR
SVGSLSAAAAVTVVSAPAEEDSPASKTLERLLLERVASRDESIRALTVRL
EQLEERHGELSTSDGRRVQQASESDRKYLDASIPNTPRGYIYPSKTRDVQ
AAEAQRIAETFRRRLAREKRESRRRLETMKEEVDRVVRQFQARAGRAEAA
AASAEERARFTALRHFPAKGNN*
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