prot_H-elongata_contig75112.15188.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75112.15188.1
Unique Nameprot_H-elongata_contig75112.15188.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length167
Homology
BLAST of mRNA_H-elongata_contig75112.15188.1 vs. uniprot
Match: D8LDV9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDV9_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 6.840e-77
Identity = 110/168 (65.48%), Postives = 136/168 (80.95%), Query Frame = 0
Query:    1 VIFAEALAETALETGCILAFVGAMSYLSDSY-ANPELSEVAKLSLWVGTVFLSGAATAGPRRWLETSQLFKVDRPISEQWYAKLRKPWWNPPNWLFPVMWVPLKILQVFACYEMWDKLKDRSFLSPPLVVFALYKSLGDVWNKVFFERRSLNIGTAIISLYFSTLLVG 167
            V+  EAL ETALE+G I+ FVGA  YL+  Y ++ + SEVA+L+LW   VF+SGAATAGP++WLE SQLF +D PI + WY  LRKP WNPPNW+FP+MW+PLKILQVFACYEMWDKL+ RS ++ P+VV+ +YKSLGDVWNKVFFERR L +GT +ISLY+ TLL G
Sbjct:   94 VVLVEALVETALESGLIVGFVGAAEYLAARYLSDTKFSEVARLALWTAAVFVSGAATAGPKKWLEKSQLFNIDVPIGKDWYTNLRKPRWNPPNWVFPIMWIPLKILQVFACYEMWDKLETRSCVALPVVVYTVYKSLGDVWNKVFFERRRLKMGTVVISLYYLTLLAG 261          
BLAST of mRNA_H-elongata_contig75112.15188.1 vs. uniprot
Match: A0A835YIB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIB6_9STRA)

HSP 1 Score: 104 bits (260), Expect = 3.210e-23
Identity = 56/169 (33.14%), Postives = 81/169 (47.93%), Query Frame = 0
Query:   21 VGAMSYLSDSYANPELSEVAKLSLWVGTVFLSGAATAGPRRWLETS-----------------------QLFKVDRPISEQWYAKLRKPWWNPPNWLFPVMWVPLKILQVFACYEMWDKLKD------RSFLSPPLVVFALYKSLGDVWNKVFFERRSLNIGTAIISLY 160
            V A+S   D+ +   L+    L  W   VF SG  +  P R+ E                         Q   VD P+ + WY  LRKP W PP+++FP+ W+PLK +Q+FA   +WDKL         S L  P+ +F + K++GD WNKV+F R  L +G  ++  Y
Sbjct:  216 VAAVSPKMDAASADALATGLGLMAWGAVVFGSGFLSVLPGRYREKCSAAASLXXXXXXXXXXXXXXXXVQALSVDYPLQKNWYRMLRKPRWTPPDFVFPMAWIPLKTMQMFALSLLWDKLPPGKKLIGNSLLDSPVALFVVNKAIGDTWNKVWFGRHQLGLGVTVVGAY 384          
BLAST of mRNA_H-elongata_contig75112.15188.1 vs. uniprot
Match: A0A7S0IPT2_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IPT2_9EUKA)

HSP 1 Score: 97.8 bits (242), Expect = 5.480e-22
Identity = 40/95 (42.11%), Postives = 57/95 (60.00%), Query Frame = 0
Query:   70 KVDRPISEQWYAKLRKPWWNPPNWLFPVMWVPLKILQVFACYEMWDKLKDRSFLSPPLVVFALYKSLGDVWNKVFFERRSLNIGTAIISLYFSTL 164
            K D  +S +WY K+ KP WNPP WLFPVMW+PLK+ Q       W  L  + F SP ++ F ++ +LGDVWN  FF ++ +  G  +I  ++  L
Sbjct:  102 KPDETLSPEWYGKVVKPSWNPPAWLFPVMWIPLKLAQTVGAGIAWRALDHKVFRSPAIIAFVMHLTLGDVWNSQFFVKQRILTGLLVIYSFWGVL 196          
BLAST of mRNA_H-elongata_contig75112.15188.1 vs. uniprot
Match: A0A5J4Z779_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z779_PORPP)

HSP 1 Score: 97.8 bits (242), Expect = 1.400e-21
Identity = 45/126 (35.71%), Postives = 78/126 (61.90%), Query Frame = 0
Query:   35 ELSEVAKLSLWVGTVFLSGAATAGPRRWLETSQLFKVDRPISEQWYAKLRKPWWNPPNWLFPVMWVPLKILQVFACYEMWDKLKDRSFLSPPLV--VFALYKSLGDVWNKVFFERRSLNIGTAIIS 158
            +L  +    LW+   F S      P  W++  Q+++  RP+  +WY+KL+KP W+PPN+ FP++WVP+++L+      +W+ L+ R+ LSPPL+  +FA+  S  D+WN+VFF +  +  G  ++S
Sbjct:   78 QLFSMWSFVLWMTVAFGSSFILHLPSMWMKRVQIYRPVRPLDPEWYSKLKKPIWHPPNFCFPLLWVPVRVLRSIGSSLLWEALR-RNPLSPPLMLPIFAMVWS--DIWNQVFFVQHDMVGGIGVMS 200          
BLAST of mRNA_H-elongata_contig75112.15188.1 vs. uniprot
Match: R1FSF7_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FSF7_EMIHU)

HSP 1 Score: 96.3 bits (238), Expect = 2.270e-21
Identity = 55/155 (35.48%), Postives = 84/155 (54.19%), Query Frame = 0
Query:   11 ALETGCILAFVGAMSYLSDSYANPELSEVAKLSLWVGTVFLSGAATAGPRRWLETSQLFKVDRPISEQWYAKLRKPWWNPPNWLFPVMWVPLKILQVFACYEMWDKLKDRSFLSPPLVVFALYKSLGDVWNKVFFERRSLNIGTAIISLYFSTLL 165
            A+ET  +LAF+ A + +  S A+ E S+      W+G +          R       +    + +S +WY KL KP WNPP WLFPVMW+P+K+ Q  A    W  L  R+F + P+V+F L+ SLGD+WN  FF ++    G  +I  +++ L+
Sbjct:   55 AMETILLLAFLRAAAEVV-SRASGERSK-----FWIGQLAWVVVVQGSSRL---QGYMQSNTQTLSPEWYDKLVKPNWNPPAWLFPVMWIPIKLAQTAAAGITWRALGHRTFSAAPVVMFLLHLSLGDIWNVQFFLKQRKLTGLLVIYTFWAALI 200          
BLAST of mRNA_H-elongata_contig75112.15188.1 vs. uniprot
Match: A0A8J9RG94_9CHLO (Probable translocator protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RG94_9CHLO)

HSP 1 Score: 90.5 bits (223), Expect = 1.060e-19
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0
Query:   79 WYAKLRKPWWNPPNWLFPVMWVPLKILQVFACYEMWDKL-KDRSFLSPPLVVFALYKSLGDVWNKVFFERRSL 150
            WY KLRKP WNPPNW+FP +W+PLKILQ  A + +W     D+  ++ PL +F ++  LG+ WN VFF RR +
Sbjct:   51 WYPKLRKPSWNPPNWVFPAVWIPLKILQSAALWLVWKSAGSDKESVAVPLTIFGVHALLGNQWNVVFFGRRDM 123          
BLAST of mRNA_H-elongata_contig75112.15188.1 vs. uniprot
Match: I0Z092_COCSC (TspO/MBR-related protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z092_COCSC)

HSP 1 Score: 88.6 bits (218), Expect = 5.880e-19
Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 0
Query:   79 WYAKLRKPWWNPPNWLFPVMWVPLKILQVFACYEMWDKL-KDRSFLSPPLVVFALYKSLGDVWNKVFFERRSL 150
            WY KL+KP WNPP+W+FP +W+PLKILQ  A + +W     D++ +S PL +F ++  LG+ WN VFF RR +
Sbjct:   51 WYPKLKKPSWNPPSWVFPAVWIPLKILQSAALWLVWKSAGADKASISIPLAIFGVHALLGNQWNVVFFGRRDM 123          
BLAST of mRNA_H-elongata_contig75112.15188.1 vs. uniprot
Match: A0A7S3UZZ5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZZ5_HETAK)

HSP 1 Score: 90.5 bits (223), Expect = 1.190e-18
Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 0
Query:   79 WYAKLRKPWWNPPNWLFPVMWVPLKILQVFACYEMWDKLKDRSFLSPPLVVFALYKSLGDVWNKVFFERRSLNIG-TAIISLYFS 162
            WY  L KP WNPP+WLFPVMW+PLK LQV     +W  +  R +  P ++ F  Y++LGD+WN +FF++R +  G  AI +LY S
Sbjct:  181 WYRGLAKPAWNPPDWLFPVMWIPLKTLQVAGAALVWRAV-GRRWAHPAVLAFLGYQALGDLWNALFFDQRRIGFGLVAIYALYAS 264          
BLAST of mRNA_H-elongata_contig75112.15188.1 vs. uniprot
Match: A0A7S3PBU0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PBU0_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.070e-18
Identity = 51/134 (38.06%), Postives = 74/134 (55.22%), Query Frame = 0
Query:   34 PELSEVAKLSLWVGTVFLSGAATAGPRRWLETSQLFKVDR-PISEQWYAKLRKPWWNPPNWLFPVMWVPL-KILQVFACYEMWDKLKDRSFLSPPLVVFALYKSLGDVWNKVFFERRSLNIGTAIISLYFSTLL 165
            PEL  V+ L++ +G+      A  G    + T QL + +  P    WY+ L+KPWWNPP WLFP+MW+ + K  Q +    +  K+ D  F   PL  F  + +LGD WNKVFF  +    G A+IS+++  LL
Sbjct:  116 PEL--VSALAVTLGSSLFGSLAEGGLS--VATRQLLEPNMTPGDPIWYSNLKKPWWNPPGWLFPIMWLLIVKPTQAWGIARVL-KVSDEKFPWLPLGAFTGHLALGDAWNKVFFGMQCTGRGAALISVFYGALL 244          
BLAST of mRNA_H-elongata_contig75112.15188.1 vs. uniprot
Match: A0A5J4Y7V0_9CHLO (TspO and MBR related protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y7V0_9CHLO)

HSP 1 Score: 85.5 bits (210), Expect = 8.250e-18
Identity = 40/99 (40.40%), Postives = 53/99 (53.54%), Query Frame = 0
Query:   52 SGAATAGPRRWLETSQLFKVDRPISEQWYAKLRKPWWNPPNWLFPVMWVPLKILQVFACYEMWDKLKDRSFLSPPLVVFALYKSLGDVWNKVFFERRSL 150
            +GA   G +R + T         +   WY  LRKP W PPNW+FP MW+PLKI Q  A + +W    D+  L+ PL VF    +LG+ WN VF  R  +
Sbjct:   30 AGAVVFGVQRLVPT---------MDPNWYRNLRKPEWTPPNWVFPAMWIPLKIAQSVAVWLVWKSRADKQELALPLTVFGASLALGNWWNVVFMGRHQM 119          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75112.15188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDV9_ECTSI6.840e-7765.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YIB6_9STRA3.210e-2333.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0IPT2_9EUKA5.480e-2242.11Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A5J4Z779_PORPP1.400e-2135.71Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
R1FSF7_EMIHU2.270e-2135.48Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A8J9RG94_9CHLO1.060e-1950.68Probable translocator protein n=1 Tax=Coccomyxa sp... [more]
I0Z092_COCSC5.880e-1949.32TspO/MBR-related protein n=1 Tax=Coccomyxa subelli... [more]
A0A7S3UZZ5_HETAK1.190e-1848.24Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3PBU0_9STRA4.070e-1838.06Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A5J4Y7V0_9CHLO8.250e-1840.40TspO and MBR related protein n=1 Tax=Trebouxia sp.... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038330TspO/MBR-related superfamilyGENE3D1.20.1260.100coord: 62..166
e-value: 1.9E-16
score: 61.9
IPR004307TspO/MBR-related proteinPFAMPF03073TspO_MBRcoord: 75..164
e-value: 2.7E-15
score: 56.6
IPR004307TspO/MBR-related proteinPANTHERPTHR10057PERIPHERAL-TYPE BENZODIAZEPINE RECEPTORcoord: 75..164
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 59..92
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 115..167
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75112contigH-elongata_contig75112:746..2932 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75112.15188.1mRNA_H-elongata_contig75112.15188.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75112 746..2932 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75112.15188.1 ID=prot_H-elongata_contig75112.15188.1|Name=mRNA_H-elongata_contig75112.15188.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=167bp
VIFAEALAETALETGCILAFVGAMSYLSDSYANPELSEVAKLSLWVGTVF
LSGAATAGPRRWLETSQLFKVDRPISEQWYAKLRKPWWNPPNWLFPVMWV
PLKILQVFACYEMWDKLKDRSFLSPPLVVFALYKSLGDVWNKVFFERRSL
NIGTAIISLYFSTLLVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038330TspO/MBR-related_sf
IPR004307TspO_MBR