prot_H-elongata_contig74913.15171.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74913.15171.1
Unique Nameprot_H-elongata_contig74913.15171.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length352
Homology
BLAST of mRNA_H-elongata_contig74913.15171.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 5.940e-19
Identity = 57/133 (42.86%), Postives = 77/133 (57.89%), Query Frame = 0
Query:    1 LDAFIVALNQATEGR-WYVSTRNLQLASLQLCLAGRSVSTLSVRVDANTPRSLLARRGRRHMLPETAGWRTRSSTRVPVVRARGVTWELPAGIWSQSRSTELLLLERLEWLEFGKLFKGSLNGVVWPRGLKRV 132
            L    VALN+  +G+ WY ST+ LQLASL+LC+A R   TL + VDA+TPR LLA        P+         TRVP +RAR  TW +P    +    T +     +++LEFG+ F GSL+ +VWPR LK +
Sbjct:  137 LKTLTVALNETCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSPHPKRL-----CGTRVPRLRARRATWNVPT---ASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTI 261          
BLAST of mRNA_H-elongata_contig74913.15171.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 5.960e-18
Identity = 56/137 (40.88%), Postives = 81/137 (59.12%), Query Frame = 0
Query:    1 LDAFIVALNQATEGR-WYVSTRNLQLASLQLCLAGRSVSTLSVRVDANTPRSLLARRGRRHMLPETAGWRTRSSTRVPVVRARGVTWELPAGIWSQSRSTELLLLERLEWLEFGKLFKGSLNGVVWPRGLKRVRLNG 136
            L+A IVALN+ ++G+ WY ST+  QLASL+ C+A R+  TL ++VD+ TPR LLA        P+         TRVP +RAR VTW++P     ++    ++  + LE   F + F+ SL  V WPR LK V ++G
Sbjct:   13 LNAIIVALNETSDGKSWYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPPHPKRL-----CGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLE---FVRAFEDSLEAVAWPRRLKTVEVSG 141          
BLAST of mRNA_H-elongata_contig74913.15171.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 9.230e-18
Identity = 67/139 (48.20%), Postives = 79/139 (56.83%), Query Frame = 0
Query:    1 LDAFIVALNQATEG---RWYVSTRNLQLASLQLCLAGRSVSTLSVRVDANTPRSLLARRGRRHMLPETAGWRTRSSTRVPVVRARGVTWELPAGIWSQSRSTELLLL-ERLEWLEFGKLFKGSLNG-VVWPRGLKRVRL 134
            LDAF++AL+QA EG   RWY ST  LQL SL LC A R+ S L V VD  TPRSL + R  +   P T  W    S+RVPVVRA  +TW L      +  + EL    ERLE L  G     SL   VVWPRGL ++ L
Sbjct:   12 LDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTR-PNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELL--GSSCVSSLGSEVVWPRGLTQLVL 147          
BLAST of mRNA_H-elongata_contig74913.15171.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.140e-17
Identity = 64/142 (45.07%), Postives = 77/142 (54.23%), Query Frame = 0
Query:    2 DAFIVALNQATEG---RWYVSTRNLQLASLQLCLAGRSVSTLSVRVDANTPRSLLARRGRRHMLPETAGWRTRSSTRVPVVRARGVTWELPAGIWSQSRSTELLLL-ERLEWLEFGKLFKGSLNGVVWPRGLKRVRLNGCFN 139
            DAF +AL+QA EG   RWY ST  LQL SL +C A RS  TL VRV   TP SL +       LP T   + R  +RVPVVRA  +TW        Q  + EL    ERLE +  G L   SL  VVWP GL ++ L+  F+
Sbjct:   11 DAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSP-PTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMV--GPLCAASLGSVVWPLGLTQLVLDTDFH 149          
BLAST of mRNA_H-elongata_contig74913.15171.1 vs. uniprot
Match: D7FH81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 2.770e-17
Identity = 53/133 (39.85%), Postives = 73/133 (54.89%), Query Frame = 0
Query:    1 LDAFIVALNQATEGR-WYVSTRNLQLASLQLCLAGRSVSTLSVRVDANTPRSLLARRGRRHMLPETAGWRTRSSTRVPVVRARGVTWELPAGIWSQSRSTELLLLERLEWLEFGKLFKGSLNGVVWPRGLKRV 132
            L + IVALN+  +G  WY ST+ LQ ASL+ C+A R+   + ++VD   PR+LLA        P+   W     TRVP +RAR VTW + A   +      +  +  ++ LEFG  F GSL  V WPR LK +
Sbjct:   15 LSSLIVALNETCDGTSWYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPPPHPKRLCW-----TRVPRLRARSVTWNMRA---AAELGNPIFAITDVDCLEFGGTFDGSLEAVTWPRRLKMI 139          
BLAST of mRNA_H-elongata_contig74913.15171.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 4.060e-17
Identity = 54/136 (39.71%), Postives = 75/136 (55.15%), Query Frame = 0
Query:    1 LDAFIVALNQATEGR-WYVSTRNLQLASLQLCLAGRSVSTLSVRVDANTPRSLLARRGRRHMLPETAGWRTRSSTRVPVVRARGVTWELPAGIWSQSRSTELLLLERLEWLEFGKLFKGSLNGVVWPRGLKRVRLN 135
            L+A IVALN+  +G+ WY ST+ LQLASL  C+A R+  T+ + VD   PR LLA        P+   W     TRVP +R+R VTW +P    +    T +  +  +E+LEFG  F  SL  V WP  L+ +  +
Sbjct:   52 LEALIVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCW-----TRVPRLRSRRVTWNMPT---AAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTMEFH 179          
BLAST of mRNA_H-elongata_contig74913.15171.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 3.450e-16
Identity = 56/133 (42.11%), Postives = 77/133 (57.89%), Query Frame = 0
Query:    1 LDAFIVALNQATEGR-WYVSTRNLQLASLQLCLAGRSVSTLSVRVDANTPRSLLARRGRRHMLPETAGWRTRSSTRVPVVRARGVTWELPAGIWSQSRSTELLLLERLEWLEFGKLFKGSLNGVVWPRGLKRV 132
            L+A  VAL +  +G+ WY ST+ LQLASL+ C+A R+  TL + VD   PR LLA        P+       S  RVP +RAR VTW +P    ++ RS    L++ L+ L+FG  F+GSL  V WPR L+ +
Sbjct:   37 LNAIYVALGETRDGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPPQHPKRL-----SRRRVPRLRARHVTWNMPTA--AELRSPIFALMD-LDHLDFGSAFEGSLEAVTWPRRLESI 161          
BLAST of mRNA_H-elongata_contig74913.15171.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 3.770e-16
Identity = 57/129 (44.19%), Postives = 75/129 (58.14%), Query Frame = 0
Query:    5 IVALNQATEG-RWYVSTRNLQLASLQLCLAGRSVSTLSVRVDANTPRSLLARRGRRHMLPETAGWRTRSSTRVPVVRARGVTWELPAGIWSQSRSTELLLLERLEWLEFGKLFKGSLNGVVWPRGLKRV 132
            I+ALN+  +G RWY ST+ LQLASL+ CLA R    L ++VDA TPR+LLA        P T   +    TRVP +RAR V W +P    +    T +  L+ +  L FG +F GSL  VVWP  LK++
Sbjct:   22 ILALNEMCDGKRWYTSTKELQLASLEFCLACRKYQILELKVDAQTPRNLLAAVDAPP--PHT---KRPCRTRVPRLRARRVKWNMPT---ATELRTLMFALKDVNCLRFGGVFNGSLEAVVWPPPLKQI 142          
BLAST of mRNA_H-elongata_contig74913.15171.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 4.780e-16
Identity = 60/135 (44.44%), Postives = 74/135 (54.81%), Query Frame = 0
Query:    1 LDAFIVALNQATEG---RWYVSTRNLQLASLQLCLAGRSVSTLSVRVDANTPRSLLARRGRRHMLPETAGWRTRSSTRVPVVRARGVTWELPAGIWSQSRSTELLLLERLEWLEFGKLFKGSLNGVVWPRGLKRV 132
            LDAF+VALNQA +G   RWYVST  LQL SL++C A R V TL VRV   TP SL     + H        +   S+RVPVV+A G+TW LP G+  Q  +TE+                 SL   VWP+ LKR+
Sbjct:   10 LDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFP-SQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSS-AASLESAVWPQRLKRM 142          
BLAST of mRNA_H-elongata_contig74913.15171.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 1.200e-15
Identity = 64/136 (47.06%), Postives = 79/136 (58.09%), Query Frame = 0
Query:    1 LDAFIVALNQATEG---RWYVSTRNLQLASLQLCLAGRSVSTLSVRVDANTPRSLLARRGRRHMLPETAGWRTRSSTRVPVVRARGVTWELPAGIWSQSRSTELLLLERLEWLEFG-KLFKGSLNGVVWPRGLKRV 132
            LDAF+VAL+Q  EG   RWY ST  LQLASL+ C A RS   L V VDA TP +L +          TAG    +STRVP V+A G+TW  P      S S+EL    RLE L+    L   +L+ VVWP+GL+R+
Sbjct:   10 LDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSL----GQANPTAG----TSTRVPAVQAVGLTWARPTESPLGSASSELWT--RLESLQLQVSLCTANLDSVVWPQGLQRL 135          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74913.15171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KPY7_9PHAE5.940e-1942.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUA5_9PHAE5.960e-1840.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LIJ3_9PHAE9.230e-1848.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7F9_ECTSI1.140e-1745.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FH81_ECTSI2.770e-1739.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRF9_9PHAE4.060e-1739.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZZ4_9PHAE3.450e-1642.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRK5_9PHAE3.770e-1644.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNI6_9PHAE4.780e-1644.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1V9_9PHAE1.200e-1547.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 182..222
e-value: 4.4E-9
score: 36.4
coord: 270..312
e-value: 1.5E-4
score: 21.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 94..352
e-value: 1.7E-10
score: 41.8
NoneNo IPR availablePANTHERPTHR32134:SF86coord: 107..243
coord: 182..350
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 107..243
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 182..350
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 105..332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74913contigH-elongata_contig74913:1737..2792 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74913.15171.1mRNA_H-elongata_contig74913.15171.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74913 1737..2792 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74913.15171.1 ID=prot_H-elongata_contig74913.15171.1|Name=mRNA_H-elongata_contig74913.15171.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=352bp
LDAFIVALNQATEGRWYVSTRNLQLASLQLCLAGRSVSTLSVRVDANTPR
SLLARRGRRHMLPETAGWRTRSSTRVPVVRARGVTWELPAGIWSQSRSTE
LLLLERLEWLEFGKLFKGSLNGVVWPRGLKRVRLNGCFNRCVDGASWPAS
LEELTLGGNFNQSVARVAWPAFLRRLTLGGRFNRPIAGIEFPASLEELVF
GHDFNQPIIDVAWPPSLRELRFCSNFEQAITDVEWPASLRRLTLGSSFSQ
PSGGFRWPRGLTELAFGHYFNRPIDGIIWPASLEELTIGNKFEQSIEGVA
WPTSLRRLKFGYWFNSALDGVSWPPKLERLEFGEKFNQEVTGVAWPKSLT
TI
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf