prot_H-elongata_contig7489.15166.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7489.15166.1
Unique Nameprot_H-elongata_contig7489.15166.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1215
Homology
BLAST of mRNA_H-elongata_contig7489.15166.1 vs. uniprot
Match: D7FI79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI79_ECTSI)

HSP 1 Score: 927 bits (2396), Expect = 4.820e-297
Identity = 641/1374 (46.65%), Postives = 776/1374 (56.48%), Query Frame = 0
Query:    1 KHYYKQRNYICIAAAALLSMATGRSLGRPSVLTAPLVEHLCKVWHRPRRPIDGVDPSRPSGVGGGPDGVDGCHSKGSGSDGAIAVALGQSVATLPLRPWSNEANVLAP--------------PSSPNLGV-----------EGSSLHGQVLAWSEDATVLAVSLPTGGIACLSNSSDSHGLCLATIPSREGEGMSKGYSGALPGKGVVAAALRGTRATRGGVMEVMVLYFDALLTIHTFHAGATGVAARNDIRSSPSAVCKQQLGKWHLSASAMAFHAGTDTIAVVGPSSGASRLGFSPSLYITLWRVRGGASPPRPGAPSPSPPGADPGSIDG-VMRSRSRRLGGTDGGSVVMPP-KLEELHFVALEGGSLVVPAPRAGLDRAPPGTIPALLPLFFPGLRAVAPPVQVVMNPSGGQLAVLDLAGGVTLLEVSGDAANPSALGRRSLSADGRSWRRDGGGAIHGADRSSSPSXXXXXXXX-------AGAPRAISIGWWSESTLAAVTSMGDLAFLGVSSRRSNYATAEAELLPTAFHGEGAAADRPVGSWPRPPPFGPGCTVWFAGDGRRAAVCWPGSRGSGGAGIGGSVVGLLSLGTAEEAVEGRVKRGLLVEALDLAMACGVHASGVRAALWRRAVDGGSSFTEEDVEEHLTGVADHRWVIRETLSEVALASTKKAVLSLLAEGLRRCNLLLAGGAAPMPCSVDDKTAGATATRGSRPQEHPAVAGSGWDFDDDDI---DLLE---------------------------------------DNSTTAGAGGSSSVAFLAGES--SEIHLLRARLEALRYVIKTSFLAEEAQGRGFDVGRLREFLLVGGSTEDGFLRLPTSARAEACETTAPRRWEEASCRREVLRGGLDRFAGRGETLAVWVLFERHPLETLPLRLETLRRDGGLGRVALPETLDPMAYARLLPCCAPPSGNAPPSRHG--------------------------------------------------------------NPPDRPVFYRMAACPGSDIIVEAFDVAGTP-----DEGSPVVEEE----------------TEATRQRDPGILAEWYSERAREMDTRAGQLRHAATMCELGVARVFSGLGDGGILGNDIEMRHAAEVGGQTGIELLRLRSLLRHMSSLVYSGSLSPLMSLAEWESMNLEQRLSAVLSASSAESIAEDVRGFARAAMTLLSSSLHPSPLLERAQPLTVLRRRGTFEGAREPASAASSPFHHLEGILVGVLGTTVKASQSVEAMEACAAVGKASRPDVAEDERLIRSPEALLTLLLDACYAWSETAPPPRALEAAWDLLECVPARRSDVDASLQDRADALEGHLYATQVLQ 1213
            +H+Y QRNY+ IAA+  LS+ +GRSLGRPS LT PLVEHL KVWHRPRRP+ GVD +  S  GG     +G        DG +AVALG SVAT+PLRPW+ E  V+AP              PSS  +                SLHGQVLAWS+D +V+AVS PTGG+ACL + S   G CLAT+  R   G  +G S A  G GV   ALRG+  + GG MEV+VL +DA+L +++F           ++ SSP+   +Q+LG+WH S  AMAFH  +DT+AVVGPS GASR      L +TLWRV GG                        ++R+R  RL      ++ +PP +L ELHFV+LEGGS VVPAPRAGLDRAPPGT+PALLPLFFPGLRAVAPPVQVV NPSG +LAVLD+AGGV+++E S DAAN S+LGRR LSADGRSW R  G A           XXXXXXXX       A  PRA+S+GWWSE TLAA++S GDLAFL      +  ATA    + TAF    +A DR   + PRPPP GP C+VWFAGDGRRAAVCWPG  G+  AG GGSVVGLL+LGTAEEAVE RV+RGLL EALDLA ACG+ A  VRA LWRRAV+ GS F+E+DV++HL GV+DHRWV++E L+ + LA+T+ A  ++LAEGLRRC+ LL   +     S                         GWDFD       DL +                                         + TA   GS      AG+   SE+  LRARL +LRY++ T    E  QGRGFDVG LREFL + GS + G                  R WE+   RR+ LR  L  FA +G+  AV VL ERHPLETLP RLE L         ALPETLDP  YA LLPCC   +  A  S  G                                                                 D PV    +A       +   DV GT      D+G  + +++                T A RQRD   LA WY+ RARE+D RAGQLRHAAT+C  G  RV       G  G D+           T  +L+RL  LL+H++SLVY+GS+SP ++LA WE+M LE+R+SAVLSASS  +IA DVR FA AA            LLER       R +  +E     A +A+ P   LEG++V VLG  VK + S E MEACAAV KASRP+V E++RLIR PEALLTLLLDACYAW+ETAP  RA+EAAWDLLECVP R+++VDASLQDR DALEGHLYATQVLQ
Sbjct:   17 EHHYVQRNYLRIAASVFLSVLSGRSLGRPSALTPPLVEHLSKVWHRPRRPLVGVDAAAGSREGGLAHAEEG--------DGVVAVALGPSVATIPLRPWAKEVKVMAPRLLRRNKLLPVPGGPSSRRMPAGERXXXXXXXXXALSLHGQVLAWSKDGSVVAVSTPTGGVACLRHLS---GACLATVVPRP-TGPDRGGSAASLGGGVAGVALRGS--SEGGKMEVVVLTYDAVLALYSFSVEGGVGEGGGEVLSSPA--WEQRLGRWHASTCAMAFHGASDTVAVVGPS-GASRP--DSCLSLTLWRVTGGXXXXXXXXXXXXXXXXXXXXXXXXILRARGSRLAAGGSAAMPLPPLRLTELHFVSLEGGSFVVPAPRAGLDRAPPGTVPALLPLFFPGLRAVAPPVQVVFNPSGDRLAVLDIAGGVSIVETSEDAANASSLGRRCLSADGRSWHRVTGAAXXXXXXXXXXXXXXXXXXXXXXXXTGAAVPRAVSVGWWSELTLAAISSAGDLAFLDAPLLEAGPATAATVEIATAFRN--SAGDRGGVAGPRPPPLGPRCSVWFAGDGRRAAVCWPGLGGARSAGAGGSVVGLLTLGTAEEAVESRVRRGLLGEALDLATACGLDAGSVRAGLWRRAVERGS-FSEDDVQQHLAGVSDHRWVVKEALAGIGLAATESAAAAILAEGLRRCDFLLPAHSTGWGSSSXXXXXXXXXXXXXXXXXXXXXXXDGWDFDXXXXXXGDLGDAPRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVTAVGLGS------AGDEGDSEVRRLRARLMSLRYLLDTFLALEGEQGRGFDVGGLREFLGL-GSGDGG---------------AEERAWEDFPYRRDNLRRSLMGFARKGKASAVGVLMERHPLETLPARLEALS--------ALPETLDPRLYASLLPCCGAVALTASASAAGVHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMAVQGRDAPVLGGRSANERPPTPLCEADVNGTAASSDKDDGGSIDQKDVLFVEAPGASDADQIATAAERQRDSAALAAWYAGRARELDARAGQLRHAATLCRFGARRVVVSSSSSGGRGGDV-----------TEGQLVRLDRLLQHLTSLVYAGSVSPSVTLAAWENMGLEERMSAVLSASSVGTIANDVRSFASAAXXXXXXXASGDDLLERP------REQEGYEVPTSQAVSAAVPTR-LEGVMVRVLGALVKTAPSAERMEACAAVAKASRPEVPENDRLIRKPEALLTLLLDACYAWTETAPDARAMEAAWDLLECVPTRQANVDASLQDRVDALEGHLYATQVLQ 1320          
BLAST of mRNA_H-elongata_contig7489.15166.1 vs. uniprot
Match: A0A6H5JMI9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMI9_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 1.410e-91
Identity = 196/371 (52.83%), Postives = 230/371 (61.99%), Query Frame = 0
Query:  201 MVLYFDALLTIHTFHAGATGVAARNDIRSSPSAVCKQQLGKWHLSASAMAFHAGTDTIAVVGPSSGASRLGFSPSLYITLWRVRGGA---------SPPRPGAPSPSPPGADPGSIDGVMRSRSRRLGGTDGGSVVMPPKLEELHFVALEGGSLVVPAPRAGLDRAPPGTIPALLPLFFPGLRAVAPPVQVVMNPSGGQLAVLDLAGGVTLLEVSGDAANPSALGRRSLSADGRSWRRDGGGAIHGADRSSSPSXXXXXXXX---------------AGAPRAISIGWWSESTLAAVTSMGDLAFLGVSSRRSNYATAEAELLPTAFHGEGAAADRPVGSWPRPPPFGPGCTVWFAGDGRRAAVCWPGSRG 547
            MVL +DA+L +++F          +D+ SSP+  C+Q+LG+WH S  AMAFH  TDT+AVVGPS  +    F   L +TLWRV GGA                      GAD       +R+R  RL G      + P +L ELHFVALEGGSLVVPAPRAGLDRAPPGT+PALLPLFFPGLRAVAPPVQVV NPSG +LAVLD+AGGV+++E S DAA  S+LGRR LSADGRSW R  G             XXXXXXXX               A  PRA+S+GWWSE TLAA++S GDLAFL      +  ATA    +  AF    +A DR     PRPPP GP C+VWFAGDGRRAAVCWPG+ G
Sbjct:    1 MVLTYDAVLALYSFSVEGGVGGEGSDVLSSPA--CEQRLGRWHASTCAMAFHGATDTVAVVGPSGASCPDSF---LSLTLWRVTGGAVXXXXXXXXXXXXXXXXXXXXXGAD-------LRARGSRLAGRSAAMPLPPLRLTELHFVALEGGSLVVPAPRAGLDRAPPGTVPALLPLFFPGLRAVAPPVQVVFNPSGDRLAVLDIAGGVSIVETSEDAAVASSLGRRCLSADGRSWHRVTGATAXXXXXXXXXXXXXXXXXXXXXXXXXRPSGGGTGAAVPRAVSVGWWSELTLAAMSSAGDLAFLDAPPLEAGPATAATVEIAAAFRN--SAGDRGGVGGPRPPPLGPRCSVWFAGDGRRAAVCWPGAGG 357          
BLAST of mRNA_H-elongata_contig7489.15166.1 vs. uniprot
Match: A0A6H5JI52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI52_9PHAE)

HSP 1 Score: 238 bits (607), Expect = 8.800e-64
Identity = 214/581 (36.83%), Postives = 270/581 (46.47%), Query Frame = 0
Query:  625 DHRWVIRETLSEVALASTKKAVLSLLAEGLRRCNLLLAGGAAPMPCSVDDKTAGATATRGSRPQEHPAVAGSGWDFDDD---DIDLLE-------------------------------------DNSTTAGAGGSSSVAFLAGESSEIHLLRARLEALRYVIKTSFLAEEAQGRGFDVGRLREFLLVGGSTEDGFLRLPTSARAEACETTAPRRWEEASCRREVLRGGLDRFAGRGETLAVWVLFERHPLETLPLRLETLRRDGGLGRVALPETLDPMAYARLLPCCAPPSGNAPPSRHGNPPDRPVFYRMAACPGSDIIVEAFDVA---GTP-----DEGSPVVEEE----------------TEATRQRDPGILAEWYSERAREMDTRAGQLRHAATMCELGVARVFSGLGDGGILGNDIEMRHAAEVGGQTGIELLRLRSLLRHMSSLVYSGSLSPLMSLAEWESMNLEQRLSAVLSASSAESIAEDVRGFARAAMTLLSSSLHPSPLLERAQPLTVLRRRGTFEGAREPASAASSPF--HHLEGILVGVLGTTVKASQSVEAMEACAAVGKASRPD 1139
            D RWV++E L+ + LA+T+ A  ++LAEGLRRC+ LL   +     S                +   A  G GWDF DD   D D+ +                                            A G  S        SE+  LRARL +LRY++ T    E  QG  FD   LREFL   G   +G  +      AE  ET     WE    RR+ LR  L  FA +GE  AV VL ERHPLETLP RLE LR +     +     +     AR  P     SG    + H          + AAC      V     A   GT      D+G  + +++                T A RQRD   LA WY+ RARE+D RAGQLRHAAT+C  G  RV      GG  G D+           T  +L+RL  LL+H++SLVY+GS+S  ++LA WESM+LE+R+ AVLSASS  +IA++VR FA AA        +   LLER      +R RG  EG   P S A S      LEG++V VLGT VKA+ S E MEACAAV KASRP+
Sbjct:   33 DARWVVKEALAGIGLAATEPAASAILAEGLRRCDFLLPAHSRGWGSSXXXXXXXXXXXXXPAKERPTASGGDGWDFADDADDDGDVRDAPRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAAVGLGSAGDEGDRDSEVRRLRARLMSLRYLLDTFLALEGEQGCAFDADGLREFL---GRGAEGSKKGLGDGGAE--ETA----WENFPYRRDALRRSLMGFARKGEASAVGVLMERHPLETLPARLEALRTEATTTMM-----MTMAVQARDAPFLGGQSGARVCAGH---------RQQAACHRCSRDVTGLSTANANGTAASSGKDDGGSIGQKDVFCVDAPGASDADEIATAAERQRDSAALAAWYAGRARELDARAGQLRHAATLCRFGARRVVVP-SSGGWAGGDV-----------TEGQLVRLDRLLQHLTSLVYAGSVSASVTLAAWESMDLEERMLAVLSASSVGTIADNVRSFASAAXXXXXXXANGDDLLERPPISENVRPRGQ-EGYEAPTSQAVSTAVPPRLEGVVVRVLGTLVKAAPSAERMEACAAVAKASRPE 577          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7489.15166.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FI79_ECTSI4.820e-29746.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMI9_9PHAE1.410e-9152.83Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JI52_9PHAE8.800e-6436.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15922FAMILY NOT NAMEDcoord: 817..1196
coord: 122..657
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..1214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7489contigH-elongata_contig7489:79..9537 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7489.15166.1mRNA_H-elongata_contig7489.15166.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7489 79..9537 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7489.15166.1 ID=prot_H-elongata_contig7489.15166.1|Name=mRNA_H-elongata_contig7489.15166.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1215bp
KHYYKQRNYICIAAAALLSMATGRSLGRPSVLTAPLVEHLCKVWHRPRRP
IDGVDPSRPSGVGGGPDGVDGCHSKGSGSDGAIAVALGQSVATLPLRPWS
NEANVLAPPSSPNLGVEGSSLHGQVLAWSEDATVLAVSLPTGGIACLSNS
SDSHGLCLATIPSREGEGMSKGYSGALPGKGVVAAALRGTRATRGGVMEV
MVLYFDALLTIHTFHAGATGVAARNDIRSSPSAVCKQQLGKWHLSASAMA
FHAGTDTIAVVGPSSGASRLGFSPSLYITLWRVRGGASPPRPGAPSPSPP
GADPGSIDGVMRSRSRRLGGTDGGSVVMPPKLEELHFVALEGGSLVVPAP
RAGLDRAPPGTIPALLPLFFPGLRAVAPPVQVVMNPSGGQLAVLDLAGGV
TLLEVSGDAANPSALGRRSLSADGRSWRRDGGGAIHGADRSSSPSPDTTT
TAGAGAPRAISIGWWSESTLAAVTSMGDLAFLGVSSRRSNYATAEAELLP
TAFHGEGAAADRPVGSWPRPPPFGPGCTVWFAGDGRRAAVCWPGSRGSGG
AGIGGSVVGLLSLGTAEEAVEGRVKRGLLVEALDLAMACGVHASGVRAAL
WRRAVDGGSSFTEEDVEEHLTGVADHRWVIRETLSEVALASTKKAVLSLL
AEGLRRCNLLLAGGAAPMPCSVDDKTAGATATRGSRPQEHPAVAGSGWDF
DDDDIDLLEDNSTTAGAGGSSSVAFLAGESSEIHLLRARLEALRYVIKTS
FLAEEAQGRGFDVGRLREFLLVGGSTEDGFLRLPTSARAEACETTAPRRW
EEASCRREVLRGGLDRFAGRGETLAVWVLFERHPLETLPLRLETLRRDGG
LGRVALPETLDPMAYARLLPCCAPPSGNAPPSRHGNPPDRPVFYRMAACP
GSDIIVEAFDVAGTPDEGSPVVEEETEATRQRDPGILAEWYSERAREMDT
RAGQLRHAATMCELGVARVFSGLGDGGILGNDIEMRHAAEVGGQTGIELL
RLRSLLRHMSSLVYSGSLSPLMSLAEWESMNLEQRLSAVLSASSAESIAE
DVRGFARAAMTLLSSSLHPSPLLERAQPLTVLRRRGTFEGAREPASAASS
PFHHLEGILVGVLGTTVKASQSVEAMEACAAVGKASRPDVAEDERLIRSP
EALLTLLLDACYAWSETAPPPRALEAAWDLLECVPARRSDVDASLQDRAD
ALEGHLYATQVLQR*
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