prot_H-elongata_contig7462.15142.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig7462.15142.1
Unique Name	prot_H-elongata_contig7462.15142.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	351

Homology

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BLAST of mRNA_H-elongata_contig7462.15142.1 vs. uniprot
Match: D7G6Y9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6Y9_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 1.010e-81
Identity = 167/233 (71.67%), Postives = 196/233 (84.12%), Query Frame = 0

Query:  118 RTSFIAEGLSNVRLPMAYYCRAKTPETFSKEGLERDDSEGEAEFHDAIDTAAGLSKDANKAREMKEAGNGHYKNGDYKDAVDYYTMALSYCPDGEAHSKDRAVYLGNRAQAHLRLKEFDDVVVDCTAALEHDPSYMKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXNIRSAKENVTRLEKLQSEKTEHMKEEAIGKLKELGNSVLGNFGLSLDNFKMVQDPSSGSYSINFER 350
            R + IA GL+NVRLPM Y  + +  E   ++GL   DS+GE +FHDA D+  G+ KDA KAREMKEAGN HYKNG+++DAVDYYTMAL YCP+ EAH KDRAV+L NRAQ HLRL+E++ VV DCTAALE DPSY+KALLRXXXXXXXXXXXXXXXXXXXXXXXXXX++R AKE+V RLEKL ++K E MKEEAIGKLK+LGN++LGNFGLS DNFKM QDP++GSYSINFER
Sbjct:  173 RVNVIASGLANVRLPMGYGRQMRQDE---EDGLV--DSDGEEQFHDAQDSGPGVVKDATKAREMKEAGNEHYKNGEFEDAVDYYTMALHYCPEDEAHKKDRAVFLANRAQGHLRLEEYETVVEDCTAALELDPSYVKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXSLRLAKESVPRLEKLHNDKNEKMKEEAIGKLKDLGNALLGNFGLSTDNFKMKQDPNTGSYSINFER 400

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BLAST of mRNA_H-elongata_contig7462.15142.1 vs. uniprot
Match: A0A835YHX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHX5_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.970e-42
Identity = 109/187 (58.29%), Postives = 135/187 (72.19%), Query Frame = 0

Query:  171 LSKDANKAREMKEAGNGHYKNGDYKDAVDYYTMALSYCPDGEAHSKDRAVYLGNRAQAHLRLKEFDDVVVDCTAALEHDPSYMKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXN------IRSAKENVTRLEKLQSEKTEHMKEEAIGKLKELGNSVLGNFGLSLDNFKMVQDPSSGS-YSINFER 350
            ++KDA KA+EMKE GN +Y    Y DA D YT+AL +CPD E   +++AVY  NRA  HLRL++F  VV DCT AL   P Y+KALLR XXXXXXXXXXXXXXXXXXXXXX          ++ A  ++ RL+KL  EK E +K+EA+GKLKELGNS+LG+FGLSLDNFK+ QD S G  Y+I+F +
Sbjct:    1 MTKDAAKAKEMKEQGNTYYLAKQYLDAADCYTLALEFCPDDEGERENKAVYFSNRAACHLRLEDFQQVVNDCTEALTIKPKYVKALLRRXXXXXXXXXXXXXXXXXXXXXXAPPEEAPPKVVQKALTDIDRLQKLHEEKMEQLKDEALGKLKELGNSLLGHFGLSLDNFKVNQDASGGGGYNISFNK 187

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BLAST of mRNA_H-elongata_contig7462.15142.1 vs. uniprot
Match: A0A7S2S6C6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S6C6_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.220e-37
Identity = 97/178 (54.49%), Postives = 128/178 (71.91%), Query Frame = 0

Query:  173 KDANKAREMKEAGNGHYKNGDYKDAVDYYTMALSYCPDGEAHSKDRAVYLGNRAQAHLRLKEFDDVVVDCTAALEHDPSYMKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXNIRSAKENVTRLEKLQSEKTEHMKEEAIGKLKELGNSVLGNFGLSLDNFKMVQDPSSGSYSINFER 350
            ++A  A ++KE GN  YK+ +Y +A+D Y+ AL Y P+ + +   RAVYL NRA   L L  ++DV+ DCT ALE+DP Y+KALLR      XXXXXXXXXXXXXXXXXXXX    A +   RL+ +  +K E +K+E +GKLK+LGN+VLG FG+SLDNFK VQDP +GSYSI+F++
Sbjct:   62 RNAETAAKLKEQGNEEYKSKNYLNAIDIYSDALEYVPEEKLYDSARAVYLSNRAACFLALGHYEDVIEDCTDALENDPRYVKALLRRAQAHEXXXXXXXXXXXXXXXXXXXXXXXXAVQEQRRLDAIVKKKHEELKDEMMGKLKDLGNTVLGKFGMSLDNFKTVQDPQTGSYSISFQQ 239

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BLAST of mRNA_H-elongata_contig7462.15142.1 vs. uniprot
Match: G3G6S3_9PHAE (Tetratricopeptide repeat protein 1 (Fragment) n=21 Tax=Fucaceae TaxID=3010 RepID=G3G6S3_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 1.280e-36
Identity = 76/110 (69.09%), Postives = 81/110 (73.64%), Query Frame = 0

Query:  228 AHLRLKEFDDVVVDCTAALEHDPSYMKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXNIRSAKENVTRLEKLQSEKTEHMKEEAIGKLKELGNSVLGNFGLSLDNFKMVQ 337
            AHLRL+EFDDVVVDCTAALE DPSYMKALLR                          N+RSAKEN+ RLEKLQ++KTE MKEEAIGKLKELGNSVLGNFGLSLDNFKMVQ
Sbjct:    1 AHLRLQEFDDVVVDCTAALEVDPSYMKALLRRAQANEQLEKYDLALEDTKTLVEIDPNLRSAKENMARLEKLQADKTEKMKEEAIGKLKELGNSVLGNFGLSLDNFKMVQ 110

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BLAST of mRNA_H-elongata_contig7462.15142.1 vs. uniprot
Match: UPI0019298FD4 (tetratricopeptide repeat protein 1 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0019298FD4)

HSP 1 Score: 140 bits (354), Expect = 1.810e-36
Identity = 80/197 (40.61%), Postives = 114/197 (57.87%), Query Frame = 0

Query:  154 DSEGEAEFHDAIDTAAGLSKDANKAREMKEAGNGHYKNGDYKDAVDYYTMALSYCPDGEAHSKDRAVYLGNRAQAHLRLKEFDDVVVDCTAALEHDPSYMKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXNIRSAKENVTRLEKLQSEKTEHMKEEAIGKLKELGNSVLGNFGLSLDNFKMVQDPSSGSYSINFER 350
            DS  E  F DA++    L K  N+  + K  GN  + +  Y+DA+  Y +AL    +G    + R++   NRA   L+L+++DD + +CT ALE +PSY+KALLR                          +   A+  + RLE + +EK E MKEE IGKLKE+GNSVLG FG+S+DNFK V+DP++GSYSI+F+R
Sbjct:   30 DSSDEEPFEDALNEEQLLEKARNQVNDAKIEGNRLFGSDQYEDALSKYELALQLASEGPDSEEIRSMCHANRAICFLKLQKYDDTIKECTKALELNPSYVKALLRRAEAHEKLDHLEEAIADMKKIMELDPSNDQARRTIQRLEPILAEKREKMKEEMIGKLKEMGNSVLGRFGMSVDNFKAVKDPNTGSYSISFQR 226

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BLAST of mRNA_H-elongata_contig7462.15142.1 vs. uniprot
Match: A0A024ULW4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024ULW4_9STRA)

HSP 1 Score: 139 bits (351), Expect = 5.140e-36
Identity = 82/208 (39.42%), Postives = 115/208 (55.29%), Query Frame = 0

Query:  141 TPETFSKEGLERDDSEGEAEFHDAIDTAAGLSKDANKAREMKEAGNGHYKNGDYKDAVDYYTMALSYCPDGEAHSKDRAVYLGNRAQAHLRLKEFDDVVVDCTAALEHDPSYMKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXNIRSAKENVTRLEKLQSEKTEHMKEEAIGKLKELGNSVLGNFGLSLDNFKMVQDPSSGSYSINF 348
            TPE  + E     D+E + E ++ ++  +  +KD  KA E KEAGN  +K G Y DA D YT AL  CP  + ++ ++AVY  NRA   L L   ++ + DCT A+ H P Y+KAL+R                           + SA +   RL  + +E+ E MK E + KLK  GN++LG FGLS DNF+MVQDP++GSY+INF
Sbjct:   14 TPEKTTPERKPTHDNE-DHELNELVEELSVETKDVKKASEAKEAGNELFKAGRYLDAFDLYTKALRLCPSEDEYAYNKAVYFSNRAACLLHLGRPEESIEDCTMAITHSPKYVKALMRRSQAYEKMDKMDEALQDVKTVLEIDPTVPSAIDAEKRLSAVVAERQEKMKAEMLDKLKGFGNTILGKFGLSTDNFQMVQDPATGSYNINF 220

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BLAST of mRNA_H-elongata_contig7462.15142.1 vs. uniprot
Match: A0A0K9NL18_ZOSMR (Tetratricopeptide repeat protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NL18_ZOSMR)

HSP 1 Score: 138 bits (347), Expect = 3.060e-35
Identity = 102/197 (51.78%), Postives = 132/197 (67.01%), Query Frame = 0

Query:  154 DSEGEAEFHDAIDTAAGLSKDANKAREMKEAGNGHYKNGDYKDAVDYYTMALSYCPDGEAHSKDRAVYLGNRAQAHLRLKEFDDVVVDCTAALEHDPSYMKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXNIRSAKENVTRLEKLQSEKTEHMKEEAIGKLKELGNSVLGNFGLSLDNFKMVQDPSSGSYSINFER 350
            D + E  F DA+D      K  N+A + KE GN  +++G Y DA+  Y +A+   P+G      R+    NRA    +L  F+D + +CT ALE D SY KAL+R XXXXXXXXXXXXXXXXXXXXXXXXX    A + + RLE L   K E MKEE IGKLK++GNS+LG FG+S+DNFK V+DP++GSYS++F+R
Sbjct:   47 DDQEEESFEDALDDEQHKQKALNQANDAKEIGNNLFRSGQYSDALSQYEVAIQTAPEGALSEDLRSKCHNNRATCFAKLGNFNDTIKECTKALELDSSYAKALIRRXXXXXXXXXXXXXXXXXXXXXXXXXXNLQAVKTIRRLEPLAEAKREKMKEEMIGKLKDMGNSILGRFGMSVDNFKTVKDPNTGSYSVSFQR 243

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BLAST of mRNA_H-elongata_contig7462.15142.1 vs. uniprot
Match: A0A196SEH6_BLAHN (Mitochondrial Protein Translocase (MPT) Family n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SEH6_BLAHN)

HSP 1 Score: 135 bits (341), Expect = 7.010e-35
Identity = 73/180 (40.56%), Postives = 102/180 (56.67%), Query Frame = 0

Query:  171 LSKDANKAREMKEAGNGHYKNGDYKDAVDYYTMALSYCPDGEAHSKDRAVYLGNRAQAHLRLKEFDDVVVDCTAALEHDPSYMKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXNIRSAKENVTRLEKLQSEKTEHMKEEAIGKLKELGNSVLGNFGLSLDNFKMVQDPSSGSYSINFER 350
            + +   KA   KE GN  YK GD++ AV  Y  +LS+CP G+ ++KDRA++  N A A + LK++D  +   T A+E +PSY+KA  R                          +    K+   +L K   E+ E +K E IGKLKE+GN VLG FG+SLDNFKMVQDP++G YSI +E+
Sbjct:   20 IERSIEKAMSFKEEGNNMYKKGDFEAAVVSYKTSLSFCPLGDEYNKDRAIFFCNMAAAQIELKQYDAAIESATHAVEMNPSYIKAYARRASAYLATEKLDECLADYDKILELDADNTQYKQKRKQLAKQIDERNEKLKAEMIGKLKEVGNKVLGKFGMSLDNFKMVQDPATGGYSIKYEK 199

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BLAST of mRNA_H-elongata_contig7462.15142.1 vs. uniprot
Match: A0A6I9SDJ8_ELAGV (tetratricopeptide repeat protein 1 n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9SDJ8_ELAGV)

HSP 1 Score: 136 bits (343), Expect = 8.820e-35
Identity = 86/203 (42.36%), Postives = 116/203 (57.14%), Query Frame = 0

Query:  151 ERDDSEGEAEFHDAIDTAAGLSKDANKAREMKEAGNGHYKNGDYKDAVDYYTMAL---SYCPDGEAHSKDRAVYLGNRAQAHLRLKEFDDVVVDCTAALEHDPSYMKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXNIRSAKENVTRLEKLQSEKTEHMKEEAIGKLKELGNSVLGNFGLSLDNFKMVQDPSSGSYSINFER 350
            E+ DSE E  F DA+       +  N+A + KE GN  +K G Y DA+  Y +AL   S  P  E  S   A    NRA   L+L++F+D + +CT ALE +PSY+KAL+R                          +   A+ N+ RLE + +EK E MKEE IGKLKE+GNS+LG FG+S+DNFK V+DP++GSYSI F+R
Sbjct:   35 EKADSEDET-FEDALTDEQLKERSLNQANDAKEEGNKLFKAGKYGDALLQYELALQIASEVPSSEVCSICHA----NRAVCFLKLEKFNDTIKECTKALELNPSYIKALIRRAEAHEKVEHYEEAVADWKKIVDLDPSNDQARRNIRRLEPIAAEKREKMKEEMIGKLKEMGNSILGRFGMSVDNFKAVKDPNTGSYSIQFQR 232

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BLAST of mRNA_H-elongata_contig7462.15142.1 vs. uniprot
Match: A0A7S3HEF4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HEF4_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.420e-34
Identity = 70/175 (40.00%), Postives = 107/175 (61.14%), Query Frame = 0

Query:  173 KDANKAREMKEAGNGHYKNGDYKDAVDYYTMALSYCPDGEAHSKDRAVYLGNRAQAHLRLKEFDDVVVDCTAALEHDPSYMKALLRXXXXXXXXXXXXXXXXXXXXXXXXXXNIRSAKENVTRLEKLQSEKTEHMKEEAIGKLKELGNSVLGNFGLSLDNFKMVQDPSSGSYSIN 347
            K+ +KA E KE GN +++N +Y DA++ Y+ A+++CP+ E + ++ A + GNR+ A+  ++EF+ VV DCTAAL     Y+K + R                          N     + + RL+    +K   MK+EA+GKLKELGNS+LGNFG+SLDNFKM QDP++GS++I+
Sbjct:   73 KNLSKALEAKEEGNNYFRNKEYDDALEAYSKAITFCPEDEENKENLATFYGNRSAAYFAVEEFELVVEDCTAALALKADYVKVIARRMLANEKLEKYEEALTDAKLVQDNDPNYPKIADKIRRLQIAYDDKMTKMKDEALGKLKELGNSILGNFGMSLDNFKMNQDPATGSWNIS 247

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig7462.15142.1 vs. uniprot

BLAST of mRNA_H-elongata_contig7462.15142.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G6Y9_ECTSI	1.010e-81	71.67	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YHX5_9STRA	1.970e-42	58.29	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2S6C6_9STRA	1.220e-37	54.49	Hypothetical protein n=1 Tax=labyrinthulid quahog ...	[more]
G3G6S3_9PHAE	1.280e-36	69.09	Tetratricopeptide repeat protein 1 (Fragment) n=21...	[more]
UPI0019298FD4	1.810e-36	40.61	tetratricopeptide repeat protein 1 n=1 Tax=Dioscor...	[more]
A0A024ULW4_9STRA	5.140e-36	39.42	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]
A0A0K9NL18_ZOSMR	3.060e-35	51.78	Tetratricopeptide repeat protein n=1 Tax=Zostera m...	[more]
A0A196SEH6_BLAHN	7.010e-35	40.56	Mitochondrial Protein Translocase (MPT) Family n=1...	[more]
A0A6I9SDJ8_ELAGV	8.820e-35	42.36	tetratricopeptide repeat protein 1 n=1 Tax=Elaeis ...	[more]
A0A7S3HEF4_9STRA	1.420e-34	40.00	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 259..279
None	No IPR available	PANTHER	PTHR46014	FAMILY NOT NAMED	coord: 150..348
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 178..211 e-value: 0.032 score: 23.4 coord: 219..252 e-value: 5.1E-4 score: 29.3 coord: 253..286 e-value: 0.086 score: 22.0
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 178..211 score: 9.411
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 253..286 score: 7.759
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 219..252 score: 5.281
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 173..305 e-value: 7.7E-39 score: 134.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 172..306
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 178..286 score: 16.368

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig7462	contig	H-elongata_contig7462:3047..5983 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig7462.15142.1	mRNA_H-elongata_contig7462.15142.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig7462 2637..6114 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig7462.15142.1 ID=prot_H-elongata_contig7462.15142.1|Name=mRNA_H-elongata_contig7462.15142.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=351bp
MGESQATTVSNDLSSAPGSPQKIAINTEGDQKQVDQDDQAESDGETSEEF
QDAREALRLPSEQSRGWGKGYIEAIPEMTNASSETLDSEKPRGENEPQPQ
PVKPCPAELVMGAGSKKRTSFIAEGLSNVRLPMAYYCRAKTPETFSKEGL
ERDDSEGEAEFHDAIDTAAGLSKDANKAREMKEAGNGHYKNGDYKDAVDY
YTMALSYCPDGEAHSKDRAVYLGNRAQAHLRLKEFDDVVVDCTAALEHDP
SYMKALLRRAQANEQLEKYDLALEDTKTLVEMDPNIRSAKENVTRLEKLQ
SEKTEHMKEEAIGKLKELGNSVLGNFGLSLDNFKMVQDPSSGSYSINFER
*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019734	TPR_repeat
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom