prot_H-elongata_contig74605.15141.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74605.15141.1
Unique Nameprot_H-elongata_contig74605.15141.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length271
Homology
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BLAST of mRNA_H-elongata_contig74605.15141.1 vs. uniprot
Match: D8LQE4_ECTSI (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE4_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 3.130e-9
Identity = 28/46 (60.87%), Postives = 36/46 (78.26%), Query Frame = 0 
Query:    5 CPWERHWDEDSASFFFFNPTTEASEWEVPAGWEAHFAELDAQEAGG 50
            CPW+RHWD D+ + F++N  TE SEW+VP GWEAHFA LD + +GG
Sbjct:    8 CPWQRHWD-DTGTVFYYNENTEESEWDVPPGWEAHFAGLDEKASGG 52
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74605.15141.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQE4_ECTSI3.130e-960.87WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.70.10coord: 2..50
e-value: 3.3E-7
score: 31.7
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 6..35
score: 10.128
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 4..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74605contigH-elongata_contig74605:2026..2861 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74605.15141.1mRNA_H-elongata_contig74605.15141.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74605 1651..2916 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74605.15141.1 ID=prot_H-elongata_contig74605.15141.1|Name=mRNA_H-elongata_contig74605.15141.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=271bp
MEGECPWERHWDEDSASFFFFNPTTEASEWEVPAGWEAHFAELDAQEAGG
GSTATAVVSDPPANDEDPSIPVEVGAGDQADEGEEQDNYAVGHGEGAEVR
DDTGTSPDDGDDAVAFEEGTTVQDPDGRYGYGDDDQNRHEPNGRQDIRTV
DANGDTFSAAESSVASATVSPEDYTVTTSDPGACAARRVHGRRRRYTCHH
STHCCCPSGYSCRMYLDKNRGRIRQRVLLQRGHRRVLLGRTLGIYSLPRC
LARRWGVGLCRGRGGRRRGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf