prot_H-elongata_contig74596.15139.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74596.15139.1
Unique Nameprot_H-elongata_contig74596.15139.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length91
Homology
BLAST of mRNA_H-elongata_contig74596.15139.1 vs. uniprot
Match: A0A6H5KSZ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSZ4_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 1.230e-19
Identity = 43/70 (61.43%), Postives = 50/70 (71.43%), Query Frame = 0
Query:    1 WVHSVCVIFCPLTRYDESANS--WMGVSREYHRARCLTCAECKRRGASIGCEVPACNVSCHFPCAIQASR 68
            W H+ CV F P T YDE+A    W  VSREY RARCL+C  C+ +GASIGC V +CN S HFPCAI+ASR
Sbjct:   76 WCHTNCVHFSPQTIYDETAPKCKWRDVSREYFRARCLSCIICEEKGASIGCRVSSCNASVHFPCAIKASR 145          
BLAST of mRNA_H-elongata_contig74596.15139.1 vs. uniprot
Match: A0A2D4BLJ4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BLJ4_PYTIN)

HSP 1 Score: 65.5 bits (158), Expect = 2.090e-10
Identity = 33/70 (47.14%), Postives = 41/70 (58.57%), Query Frame = 0
Query:    1 WVHSVCVIFCPLTRYDESANSWMGVSREYHRARCLTCAECKRRGASIGCEVPACNVSCHFPCAIQASRAL 70
            +VH  C I  PL    + A  W  V++E  R R LTCAECKRRGA++GC V  C  S H+ CA+    AL
Sbjct:  990 FVHDQCAIASPLC--FKRAGKWYNVTKEIRRGRSLTCAECKRRGATVGCTVERCPKSYHWRCAVGCGWAL 1057          
BLAST of mRNA_H-elongata_contig74596.15139.1 vs. uniprot
Match: A0A2G5BE22_COERN (Uncharacterized protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BE22_COERN)

HSP 1 Score: 57.8 bits (138), Expect = 1.080e-7
Identity = 28/63 (44.44%), Postives = 33/63 (52.38%), Query Frame = 0
Query:    1 WVHSVCVIFCPLTRYDESANSWMGVSREYHRARCLTCAECKRRGASIGCEVPACNVSCHFPCA 63
            W H+ C  + P     E A  W  V+    RAR + CAECKRRGA+IGC    C  S H  CA
Sbjct: 1271 WAHTACAKYSPEVLVTE-AGQWFNVAAALRRARTIKCAECKRRGATIGCFHDRCQKSFHVACA 1332          
BLAST of mRNA_H-elongata_contig74596.15139.1 vs. uniprot
Match: A0A2D0R2E4_ICTPU (uncharacterized protein LOC108266236 isoform X1 n=3 Tax=Ictalurus punctatus TaxID=7998 RepID=A0A2D0R2E4_ICTPU)

HSP 1 Score: 56.2 bits (134), Expect = 3.550e-7
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 0
Query:   25 VSREYHRARCLTCAECKRRGASIGCEVPACNVSCHFPCAIQASRAL 70
            V  EY R R LTCA CKR+GA+ GCEV +C  S H+PCA Q +RAL
Sbjct:   65 VKDEYKRGRKLTCAYCKRKGATAGCEVKSCKRSYHYPCA-QKARAL 109          
BLAST of mRNA_H-elongata_contig74596.15139.1 vs. uniprot
Match: A0A8J6GQN8_MICOH (G2/M phase-specific E3 ubiquitin-protein ligase n=1 Tax=Microtus ochrogaster TaxID=79684 RepID=A0A8J6GQN8_MICOH)

HSP 1 Score: 55.5 bits (132), Expect = 6.590e-7
Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 0
Query:   25 VSREYHRARCLTCAECKRRGASIGCEVPACNVSCHFPCAIQ 65
            + +E HRA  L CA CK+ GASIGC VP C  S HFPC +Q
Sbjct:   57 IKKEVHRASKLKCAVCKKNGASIGCVVPRCKRSYHFPCGLQ 97          
BLAST of mRNA_H-elongata_contig74596.15139.1 vs. uniprot
Match: UPI0018E3521F (G2/M phase-specific E3 ubiquitin-protein ligase isoform X4 n=1 Tax=Arvicola amphibius TaxID=1047088 RepID=UPI0018E3521F)

HSP 1 Score: 55.5 bits (132), Expect = 6.660e-7
Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 0
Query:   25 VSREYHRARCLTCAECKRRGASIGCEVPACNVSCHFPCAIQ 65
            + +E HRA  L CA CK+ GASIGC VP C  S HFPC +Q
Sbjct:   69 IKKEVHRASKLKCAVCKKNGASIGCVVPRCKRSYHFPCGLQ 109          
BLAST of mRNA_H-elongata_contig74596.15139.1 vs. uniprot
Match: UPI000EAB0D50 (G2/M phase-specific E3 ubiquitin-protein ligase isoform X1 n=11 Tax=Arvicolinae TaxID=39087 RepID=UPI000EAB0D50)

HSP 1 Score: 55.5 bits (132), Expect = 6.770e-7
Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 0
Query:   25 VSREYHRARCLTCAECKRRGASIGCEVPACNVSCHFPCAIQ 65
            + +E HRA  L CA CK+ GASIGC VP C  S HFPC +Q
Sbjct:  100 IKKEVHRASKLKCAVCKKNGASIGCVVPRCKRSYHFPCGLQ 140          
BLAST of mRNA_H-elongata_contig74596.15139.1 vs. uniprot
Match: A0A8C0NYD3_CANLF (PHD finger protein 11 n=4 Tax=Canis lupus TaxID=9612 RepID=A0A8C0NYD3_CANLF)

HSP 1 Score: 55.1 bits (131), Expect = 8.340e-7
Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 0
Query:   25 VSREYHRARCLTCAECKRRGASIGCEVPACNVSCHFPCA 63
            V +E HR R LTCA C RRGA++GC+V ACN S HF CA
Sbjct:   71 VKKEIHRGRKLTCAFCNRRGATVGCDVKACNRSYHFFCA 109          
BLAST of mRNA_H-elongata_contig74596.15139.1 vs. uniprot
Match: A0A8C0S2V8_CANLF (PHD finger protein 11 n=1 Tax=Canis lupus familiaris TaxID=9615 RepID=A0A8C0S2V8_CANLF)

HSP 1 Score: 55.1 bits (131), Expect = 8.350e-7
Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 0
Query:   25 VSREYHRARCLTCAECKRRGASIGCEVPACNVSCHFPCA 63
            V +E HR R LTCA C RRGA++GC+V ACN S HF CA
Sbjct:   95 VKKEIHRGRKLTCAFCNRRGATVGCDVKACNRSYHFFCA 133          
BLAST of mRNA_H-elongata_contig74596.15139.1 vs. uniprot
Match: A0A8C0S328_CANLF (PHD finger protein 11 n=2 Tax=Canis lupus familiaris TaxID=9615 RepID=A0A8C0S328_CANLF)

HSP 1 Score: 55.1 bits (131), Expect = 8.350e-7
Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 0
Query:   25 VSREYHRARCLTCAECKRRGASIGCEVPACNVSCHFPCA 63
            V +E HR R LTCA C RRGA++GC+V ACN S HF CA
Sbjct:   95 VKKEIHRGRKLTCAFCNRRGATVGCDVKACNRSYHFFCA 133          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74596.15139.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSZ4_9PHAE1.230e-1961.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2D4BLJ4_PYTIN2.090e-1047.14Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A2G5BE22_COERN1.080e-744.44Uncharacterized protein n=1 Tax=Coemansia reversa ... [more]
A0A2D0R2E4_ICTPU3.550e-760.87uncharacterized protein LOC108266236 isoform X1 n=... [more]
A0A8J6GQN8_MICOH6.590e-758.54G2/M phase-specific E3 ubiquitin-protein ligase n=... [more]
UPI0018E3521F6.660e-758.54G2/M phase-specific E3 ubiquitin-protein ligase is... [more]
UPI000EAB0D506.770e-758.54G2/M phase-specific E3 ubiquitin-protein ligase is... [more]
A0A8C0NYD3_CANLF8.340e-764.10PHD finger protein 11 n=4 Tax=Canis lupus TaxID=96... [more]
A0A8C0S2V8_CANLF8.350e-764.10PHD finger protein 11 n=1 Tax=Canis lupus familiar... [more]
A0A8C0S328_CANLF8.350e-764.10PHD finger protein 11 n=2 Tax=Canis lupus familiar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..85
e-value: 1.5E-11
score: 46.4
NoneNo IPR availablePFAMPF13771zf-HC5HC2Hcoord: 3..70
e-value: 9.8E-9
score: 35.4
IPR034732Extended PHD (ePHD) domainPROSITEPS51805EPHDcoord: 1..83
score: 15.051

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74596contigH-elongata_contig74596:2448..2720 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74596.15139.1mRNA_H-elongata_contig74596.15139.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74596 2448..2720 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74596.15139.1 ID=prot_H-elongata_contig74596.15139.1|Name=mRNA_H-elongata_contig74596.15139.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
WVHSVCVIFCPLTRYDESANSWMGVSREYHRARCLTCAECKRRGASIGCE
VPACNVSCHFPCAIQASRALSSFVIPRLCCAHVCRLNHMR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR034732EPHD