prot_H-elongata_contig74576.15137.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74576.15137.1
Unique Nameprot_H-elongata_contig74576.15137.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length300
Homology
BLAST of mRNA_H-elongata_contig74576.15137.1 vs. uniprot
Match: A0A6H5KMW9_9PHAE (Vacuolar protein sorting-associated protein 35 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMW9_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 3.730e-80
Identity = 192/304 (63.16%), Postives = 206/304 (67.76%), Query Frame = 0
Query:    1 LPKGAPSQVQYTLVPLVFRALGLARTIRAAELAEEERXXXXXXXXXXXXXXXXXXXXXXXEVEADANIPESSNEGAANSVEXXXXXXXXXESPVTAAVNSAATNGDAGTKGRXXXXXXXXXXXVSAEKRVGTGVGTAREEGDXXKGNPGGGRGEEGALALSPPSPPS----RPRQFSSRKAYQFLHEIVTAMAPLHPWTSLTLFLQCALGADHTGFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLACDGFDPADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWSPDEVFPSR 300
            L +G+PSQVQYTLVPLVFRALGLARTIRAAE+A+EE+       XXXXXXXXXXXXXXXX                     XX     XX                      XXXXXXXXX  V+A    G    T  E          G   + GA    PP PP+    RPRQFSSRK YQFLHEIVTAMAPLHPW SL+LFLQCA+GAD TGFKAIAYEFFSQAFILYEDEL+DSKAQVRALVSMAGTLL+C+GFDP DYD+LATKTAQYAAKLLKKPDQCRMVTLCSHLFWSPDE  P R
Sbjct:  521 LGQGSPSQVQYTLVPLVFRALGLARTIRAAEVADEEQAAAAETAXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXADDNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVAAAXXAGESPATGAE----------GAVDDAGAF---PPVPPAAAVARPRQFSSRKVYQFLHEIVTAMAPLHPWVSLSLFLQCAIGADRTGFKAIAYEFFSQAFILYEDELSDSKAQVRALVSMAGTLLSCEGFDPVDYDALATKTAQYAAKLLKKPDQCRMVTLCSHLFWSPDEAAPGR 805          
BLAST of mRNA_H-elongata_contig74576.15137.1 vs. uniprot
Match: A0A7S2MQE7_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQE7_9STRA)

HSP 1 Score: 181 bits (460), Expect = 1.140e-51
Identity = 93/129 (72.09%), Postives = 101/129 (78.29%), Query Frame = 0
Query:  171 QFSSRKAYQFLHEIVTAMAPLHPWTSLTLFLQCALGADHTGFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLACDGFDPADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFW---SPDEV 296
            +FS+RK +QFLHEIVTAMA  +P   L LFLQCA  AD+   KAIAYEF SQA ILYEDELTDSK Q+RAL+SM GTLL C  FD  DYD+L TKT QYAAKLLKKPDQCRMVTLCSHLFW   S DE 
Sbjct:   82 KFSTRKIFQFLHEIVTAMAHSYPEHCLKLFLQCAQAADNCSLKAIAYEFVSQASILYEDELTDSKKQLRALISMVGTLLTCRNFDDQDYDTLITKTTQYAAKLLKKPDQCRMVTLCSHLFWVGKSEDET 210          
BLAST of mRNA_H-elongata_contig74576.15137.1 vs. uniprot
Match: A0A7S2V1M5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1M5_9STRA)

HSP 1 Score: 174 bits (440), Expect = 3.390e-49
Identity = 89/133 (66.92%), Postives = 102/133 (76.69%), Query Frame = 0
Query:  167 SRPRQFSSRKAYQFLHEIVTAMAPL-HPWTSLTLFLQCALGADHTGFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLACDGFDPADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFW--SPDEV 296
            S P +FS+RK +QFLHE VTA+A   H   +L LFLQCA  AD T FKAIAYEF SQAF++YEDEL DS+AQVRAL SM GTLL C  F+  DYD L TKT QYAAKLLKKPDQ RM+T+C+HLFW   PD+V
Sbjct:   27 SGPPRFSTRKVFQFLHEAVTAIAGAQHAPLALQLFLQCAQAADKTNFKAIAYEFISQAFVIYEDELADSRAQVRALGSMVGTLLNCHNFEEDDYDPLITKTTQYAAKLLKKPDQARMITMCTHLFWVTKPDQV 159          
BLAST of mRNA_H-elongata_contig74576.15137.1 vs. uniprot
Match: F0YJY6_AURAN (SWIM-type domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJY6_AURAN)

HSP 1 Score: 174 bits (442), Expect = 1.110e-45
Identity = 89/122 (72.95%), Postives = 95/122 (77.87%), Query Frame = 0
Query:  171 QFSSRKAYQFLHEIVTAMAPLHPWTSLTLFLQCALGADHTGFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLACDGFDPADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWS 292
            Q+SSRK +QF+HEIVTAMA   P  SL LFLQCA  AD  G  AIAYEF SQAFILYEDEL DSKAQ++AL  M GTLL   GFD  DYD+LATKT QYAAKL KKPDQCRMV  CSHLFWS
Sbjct:  586 QYSSRKVFQFVHEIVTAMAGSFPALSLHLFLQCAQEADAAGLGAIAYEFVSQAFILYEDELPDSKAQLQALHLMVGTLLQASGFDAPDYDALATKTTQYAAKLFKKPDQCRMVATCSHLFWS 707          
BLAST of mRNA_H-elongata_contig74576.15137.1 vs. uniprot
Match: A0A7S3XS10_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS10_HETAK)

HSP 1 Score: 153 bits (387), Expect = 6.970e-43
Identity = 76/125 (60.80%), Postives = 93/125 (74.40%), Query Frame = 0
Query:  174 SRKAYQFLHEIVTAMAPLHPWTSLTLFLQCALGADHTGFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLACDGFDPADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWSPDEVFP 298
            +R+ +QFLHE+ TA+AP  P  +L LFLQ A  AD      IAYEF SQAF++YE+EL DS+AQ RAL SMAG L AC  FDP+D D+LATK AQYAAKLL++PDQCR+V L +HLFW   E +P
Sbjct:    9 ARRVFQFLHEVATALAPPFPALALQLFLQAAGAADAARAPGIAYEFISQAFLIYEEELADSRAQARALESMAGALRACVAFDPSDRDALATKVAQYAAKLLRRPDQCRLVALAAHLFW---EAYP 130          
BLAST of mRNA_H-elongata_contig74576.15137.1 vs. uniprot
Match: A0A8J2SYB7_9STRA (Vacuolar protein sorting-associated protein 35 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYB7_9STRA)

HSP 1 Score: 160 bits (404), Expect = 1.450e-40
Identity = 80/126 (63.49%), Postives = 93/126 (73.81%), Query Frame = 0
Query:  171 QFSSRKAYQFLHEIVTAMAPLHPWTSLTLFLQCALGADHTGFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLACDGFDPADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWSPDEV 296
            +FS+RK +QF+HE  TA+A + P  +L +FL  AL AD     AI+YEF SQAFILYEDEL DSKAQV+AL SM GTLLA +  D ADYD+LA K  QYAAKL +KPDQCRMV  CSHLFW P  V
Sbjct:  540 EFSARKVFQFVHETATALAGVAPARALRVFLAAALEADAQCLGAISYEFVSQAFILYEDELPDSKAQVKALRSMVGTLLAAENCDAADYDALAAKATQYAAKLFRKPDQCRMVAACSHLFWPPQRV 665          
BLAST of mRNA_H-elongata_contig74576.15137.1 vs. uniprot
Match: A0A835Z7F2_9STRA (Vacuolar protein sorting-associated protein 35 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7F2_9STRA)

HSP 1 Score: 159 bits (402), Expect = 3.940e-40
Identity = 77/140 (55.00%), Postives = 101/140 (72.14%), Query Frame = 0
Query:  164 SPPSRPRQFSSRKAYQFLHEIVTAMAPLHPWTSLTLFLQCALGADHTGFKAIAYEFFSQAFILYEDELTDSKAQ--------VRALVSMAGTLLACDGFDPADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWSPDE 295
            +P   P ++ SRK +QF+HE VTAMAP+ P  SL LFLQCA+ AD  GF AIAYEF SQA ILYEDELT+++AQ        V A+ ++ G L +C GF+ AD+++LA KTAQY  +LL+KPDQ R V +CSHLFW+ ++
Sbjct:  841 APAVSPLKYGSRKMFQFVHETVTAMAPMFPAASLRLFLQCAIAADRAGFPAIAYEFVSQACILYEDELTEARAQASHTLNLAVSAVTALVGALTSCSGFNAADWEALAAKTAQYGVRLLRKPDQSRAVAMCSHLFWAAED 980          
BLAST of mRNA_H-elongata_contig74576.15137.1 vs. uniprot
Match: A0A7R9UBG1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBG1_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.820e-37
Identity = 74/124 (59.68%), Postives = 95/124 (76.61%), Query Frame = 0
Query:  170 RQF-SSRKAYQFLHEIVTAMAPLHPWTSLTLFLQCALGADHTGFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLACDGFDPADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWS 292
            RQF ++RK +QF+HEIVTAMAP +P  +L LFLQ A+ AD   +  IAYEF +QAFI+YE+ L+DS+AQVRAL +M GT+L C  F   D+DS+ T  AQ+ A LLKKPDQCRMV++ SHLFW+
Sbjct:  647 RQFYTARKGFQFIHEIVTAMAPSYPEMALKLFLQAAVSADRLSYADIAYEFMTQAFIIYEEMLSDSRAQVRALQNMIGTMLLCRRFPDNDFDSIVTNLAQHCATLLKKPDQCRMVSMVSHLFWT 770          
BLAST of mRNA_H-elongata_contig74576.15137.1 vs. uniprot
Match: A0A7S2EWB7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EWB7_TRICV)

HSP 1 Score: 144 bits (362), Expect = 1.950e-37
Identity = 76/143 (53.15%), Postives = 98/143 (68.53%), Query Frame = 0
Query:  170 RQFSSRKAYQFLHEIVTAMAPLHPWTSLTLFLQ-------CALGADHTG------FKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLACDGFDPADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWSPDEVFPS 299
            +  + RK Y FL + V A++P +P   L L+LQ       CAL A  +G      F A+AYE  +QAF+LYED+++DSKAQ R +V+M GTLLAC  F+  DY++L TKTAQYAAKLLKK DQC+MVTLCSHLF++  E  PS
Sbjct:   42 KDINCRKVYVFLQQTVAALSPGNPELGLKLYLQIANSADRCALAASRSGSKEGPEFSAVAYEIMAQAFLLYEDDVSDSKAQQRTIVAMVGTLLACRTFERDDYEALITKTAQYAAKLLKKTDQCKMVTLCSHLFFTGAEGDPS 184          
BLAST of mRNA_H-elongata_contig74576.15137.1 vs. uniprot
Match: A0A7R9WF66_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WF66_9STRA)

HSP 1 Score: 140 bits (353), Expect = 3.480e-36
Identity = 74/144 (51.39%), Postives = 98/144 (68.06%), Query Frame = 0
Query:  165 PPSRPRQFSSRKAYQFLHEIVTAMAPLHPWTSLTLFL-------QCALGADHTG------FKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLACDGFDPADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWSPDE 295
            PP   +  + RK Y F  + V A++  +P T L L+L       +CA+ A  +G      F ++AYE  +QAF+LYEDE++DSKAQ RA+ SM GTLLAC  F+  D+++L TKTAQYAAKLLKK DQC+MVTLCSHLF++ DE
Sbjct:   30 PPPFTKAVNCRKVYVFAQKTVAALSSGNPETGLKLYLNIANSADRCAMAARESGAAEWSEFSSVAYELMAQAFLLYEDEVSDSKAQQRAITSMVGTLLACRTFEREDFEALVTKTAQYAAKLLKKADQCKMVTLCSHLFFNVDE 173          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74576.15137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMW9_9PHAE3.730e-8063.16Vacuolar protein sorting-associated protein 35 n=2... [more]
A0A7S2MQE7_9STRA1.140e-5172.09Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S2V1M5_9STRA3.390e-4966.92Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0YJY6_AURAN1.110e-4572.95SWIM-type domain-containing protein n=1 Tax=Aureoc... [more]
A0A7S3XS10_HETAK6.970e-4360.80Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8J2SYB7_9STRA1.450e-4063.49Vacuolar protein sorting-associated protein 35 n=1... [more]
A0A835Z7F2_9STRA3.940e-4055.00Vacuolar protein sorting-associated protein 35 n=1... [more]
A0A7R9UBG1_9STRA1.820e-3759.68Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2EWB7_TRICV1.950e-3753.15Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7R9WF66_9STRA3.480e-3651.39Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005378Vacuolar protein sorting-associated protein 35PFAMPF03635Vps35coord: 3..292
e-value: 1.0E-45
score: 156.5
IPR005378Vacuolar protein sorting-associated protein 35PANTHERPTHR11099VACUOLAR SORTING PROTEIN 35coord: 3..294
IPR042491Vacuolar protein sorting-associated protein 35, C-terminalGENE3D1.25.40.660coord: 164..299
e-value: 9.9E-47
score: 161.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74576contigH-elongata_contig74576:27..2191 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74576.15137.1mRNA_H-elongata_contig74576.15137.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74576 27..2191 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74576.15137.1 ID=prot_H-elongata_contig74576.15137.1|Name=mRNA_H-elongata_contig74576.15137.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=300bp
LPKGAPSQVQYTLVPLVFRALGLARTIRAAELAEEERAAAAAAAAAAAAA
TAAAAAAAAAEVEADANIPESSNEGAANSVEEEGGGDGGGESPVTAAVNS
AATNGDAGTKGRGGDGGGQRAITVSAEKRVGTGVGTAREEGDKGKGNPGG
GRGEEGALALSPPSPPSRPRQFSSRKAYQFLHEIVTAMAPLHPWTSLTLF
LQCALGADHTGFKAIAYEFFSQAFILYEDELTDSKAQVRALVSMAGTLLA
CDGFDPADYDSLATKTAQYAAKLLKKPDQCRMVTLCSHLFWSPDEVFPSR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005378Vps35
IPR042491Vps35_C