prot_H-elongata_contig7443.15128.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7443.15128.1
Unique Nameprot_H-elongata_contig7443.15128.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length822
Homology
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BLAST of mRNA_H-elongata_contig7443.15128.1 vs. uniprot
Match: A0A6H5LIB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIB2_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 7.990e-27
Identity = 90/179 (50.28%), Postives = 119/179 (66.48%), Query Frame = 0 
Query:    1 MRNIREGLADVKKLWKNAEEAADKCQGEPAVESAKQAKEKAAEVVEKAKQVSENSKKAIDVARRQRRAKDVTTRATEKALKSFRSLQVVTRQATLEEKRFREN-PSLSEAGKRLSAEAEARRAASSSEAPGSGLIQAAKAALAG----------------------YESLTEEQKQQRA 156
            +R++REGLA  +KLWK++EEAADKC+G  AVE+AKQ+K+ AA+V+EK+K VSE SK+AI++AR+QRRAK+ TTR TEKAL++FR+ QV  RQATL+EKR REN P+   + K LS+         S+  PG GL  AA A  AG                      YE+LT+ QK+ RA
Sbjct:  987 LRDVREGLAKSRKLWKSSEEAADKCEGSTAVEAAKQSKDVAADVIEKSKVVSETSKRAIEIARKQRRAKEATTRXTEKALRTFRTFQVTARQATLDEKRARENMPAADGSKKSLSS------LVPSAATPGRGLTAAALAMAAGAPXXXXXXXXXXXXXXXXXEEKYENLTDGQKEVRA 1159
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7443.15128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LIB2_9PHAE7.990e-2750.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 31..65
NoneNo IPR availableCOILSCoilCoilcoord: 340..360
NoneNo IPR availableCOILSCoilCoilcoord: 161..209
NoneNo IPR availableCOILSCoilCoilcoord: 134..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7443contigH-elongata_contig7443:2763..6709 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7443.15128.1mRNA_H-elongata_contig7443.15128.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7443 2763..6709 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7443.15128.1 ID=prot_H-elongata_contig7443.15128.1|Name=mRNA_H-elongata_contig7443.15128.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=822bp
MRNIREGLADVKKLWKNAEEAADKCQGEPAVESAKQAKEKAAEVVEKAKQ
VSENSKKAIDVARRQRRAKDVTTRATEKALKSFRSLQVVTRQATLEEKRF
RENPSLSEAGKRLSAEAEARRAASSSEAPGSGLIQAAKAALAGYESLTEE
QKQQRAESQRAASAEAAVAIKEATREEEQKRLELEALERERLQELEEEAI
AAAAEEAEQGGLEGGGTTPNLTTVVVNDTPKSGKAVTQAEDIEAAATGGR
DLRPPPVQSFLAARKASAGGHLPGSGSGLRLGGVGRTAVRKRGLTRQGSG
GSAIEAAAAATAAVEAVTGMKSFTPRGAKEAVAKEEAAVLAEEAGEAKAI
QAKAKAAEAQAKAAHAHAKAALAHVEAAEAAGSEAHVEVSPTTTGWGENG
DQAGPGSIKGRLGAFTNGGSTTKATVARASVVEPVTGRARGRVALGGSSP
PLQAEGLENSVGINDQTHHQLEGADATTAAFREGANGGAATANGDPTVKA
DRSVSLSRDLGKDQAIPGAAVDVEDTAFEGGDANDVSGLQTSGWGENGDQ
SAPGSVRNRFGAFSGRGVNSDLSAPGSAKEFGGSLVSTNGSSGRGEITPF
SYQSAGSGRRQNGDQIAPGTVKKSSEPSMSPIAGTSNRGAKGVNGENSNQ
SAPGTVKGRVFSSSRSGSGSSSSSSSTGKTAIGRSGGFGGGGVNIGESNT
DSPTSADGLLCVQPSGSGENGFDPARSPSVMDRVESFPGKDGGAPKGGSS
ASRSPPYRRGAVAGDDVTDSGNGERHAKIASAASGRSESSGGKHGPLTAH
SQRRGDVGGGRVSSPGSRSPGS
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