prot_H-elongata_contig74373.15124.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74373.15124.1
Unique Nameprot_H-elongata_contig74373.15124.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length232
Homology
BLAST of mRNA_H-elongata_contig74373.15124.1 vs. uniprot
Match: D7FN92_ECTSI (Nucleotidyltransferase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN92_ECTSI)

HSP 1 Score: 395 bits (1016), Expect = 4.420e-126
Identity = 205/246 (83.33%), Postives = 216/246 (87.80%), Query Frame = 0
Query:    1 VKRALGAQCFPVGGYAIQAYLPDEEVGISAFLCHGQEKSWFVRVNETLCKVSSEASEEAATEGGAGDA----GEEVSATGSG----------NNGAPDSEDGSSYRHRLSNVNFINMGHLQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFHMHSHFDWSKYCWCIEGPRRLVVLNT 232
            VKRALGAQCFPVGGYAIQAYLPDEEVGISAFLCHGQEKSWFVRVNETLCKVSSEASEEAA E G+G +     E+++A G G             A   E+GSSYRHRLSNVNFINMG +QKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGK+HLFKRSLLLIKSWWVYESRAYTGSNMLSRITE+ALATMVLAVVNQHHARLHTPLQVMALFF MHSHFDWS+YCWCIEGPRRL  L+T
Sbjct:  647 VKRALGAQCFPVGGYAIQAYLPDEEVGISAFLCHGQEKSWFVRVNETLCKVSSEASEEAAEEEGSGTSVGGCPEKITAVGEGATPKQEGGDGGGAAIRKEEGSSYRHRLSNVNFINMGRVQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKDHLFKRSLLLIKSWWVYESRAYTGSNMLSRITESALATMVLAVVNQHHARLHTPLQVMALFFQMHSHFDWSRYCWCIEGPRRLDTLHT 892          
BLAST of mRNA_H-elongata_contig74373.15124.1 vs. uniprot
Match: A0A6H5KVP2_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP2_9PHAE)

HSP 1 Score: 387 bits (993), Expect = 1.280e-120
Identity = 200/245 (81.63%), Postives = 211/245 (86.12%), Query Frame = 0
Query:    1 VKRALGAQCFPVGGYAIQAYLPDEEVGISAFLCHGQEKSWFVRVNETLCKVSSEASEEAATEGGAGDA----GEEVSATGSGNNGAPDSEDG---------SSYRHRLSNVNFINMGHLQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFHMHSHFDWSKYCWCIEGPRRLVVLNT 232
            VKRALGAQCFPVGGYAIQAYLPDEEVGISAFLCHGQEKSWFVR+NETLCKVSSEASEE   E G G +     E+++A G G    P  E G           YRHRLSNVNFINMG +QKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGK+HLFKRSLLLIKSWWVYESRAYTGSNMLSRITE+ALATMVLAVVNQHHARLHTPLQVMA+FFHMHSHFDWS+YCWCIEGPRRL  L+T
Sbjct:  720 VKRALGAQCFPVGGYAIQAYLPDEEVGISAFLCHGQEKSWFVRLNETLCKVSSEASEETDAEEGPGTSVGGCPEKITAVGEG--ATPKQEGGXXXAAVRKEDGYRHRLSNVNFINMGRVQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKDHLFKRSLLLIKSWWVYESRAYTGSNMLSRITESALATMVLAVVNQHHARLHTPLQVMAVFFHMHSHFDWSRYCWCIEGPRRLDTLHT 962          
BLAST of mRNA_H-elongata_contig74373.15124.1 vs. uniprot
Match: A0A7N2R4X3_QUELO (Uncharacterized protein n=2 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2R4X3_QUELO)

HSP 1 Score: 110 bits (276), Expect = 4.370e-26
Identity = 55/133 (41.35%), Postives = 85/133 (63.91%), Query Frame = 0
Query:   92 RHRLSNVNFINMGHLQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFHMHSHFDWSKYCWCIEGP 224
            R  + N++ I+   ++++KC+V N + VDI  NQ+G + T+  LE+ D+L+GK+HLFKRS++LIK+W  YESR     + L  ++  AL T+VL + +Q H+ L+ PL V+  F    S FDW  YC  + GP
Sbjct:   83 RFEVKNIHCID-AEVKRVKCIVQN-IVVDISFNQLGGLCTLCFLEQVDRLVGKDHLFKRSIILIKAWCYYESRILGAHHGL--LSTYALETLVLYIFHQFHSSLNAPLAVLYRFLDYFSRFDWESYCISLSGP 211          
BLAST of mRNA_H-elongata_contig74373.15124.1 vs. uniprot
Match: D8SJ08_SELML (Uncharacterized protein (Fragment) n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SJ08_SELML)

HSP 1 Score: 112 bits (280), Expect = 8.530e-26
Identity = 59/137 (43.07%), Postives = 85/137 (62.04%), Query Frame = 0
Query:   94 RLSNVNFINMGHLQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFHMHSHFDWSKYCWCIEGPRRLVVL 230
            R+  V +I    ++ IKC+V+N + VDI  NQ+G + T+  LEE D+L+G++HLFKRS++L+K+W  YESR     + L  I+  AL T+VL + +  HA L  PL V+  F    S+FDW KYC  + GP  L  L
Sbjct:  101 RVKEVQYIQAEVVKIIKCLVEN-IVVDISFNQLGGLCTLCFLEEVDRLIGRDHLFKRSIILVKAWCYYESRILGAHHGL--ISTYALETLVLYIFHVFHASLRGPLGVLYRFLEFFSNFDWDKYCLSLWGPIPLSAL 234          
BLAST of mRNA_H-elongata_contig74373.15124.1 vs. uniprot
Match: A0A061QQX2_9CHLO (Nt domain of poly polymerase and terminal uridylyl transferase-containing (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QQX2_9CHLO)

HSP 1 Score: 113 bits (283), Expect = 1.040e-25
Identity = 74/233 (31.76%), Postives = 120/233 (51.50%), Query Frame = 0
Query:    5 LGAQCFPVGGYAIQAYLPDEEVGISAFLCHGQ------EKSWFVRVNETL-CKVSSEASEEAATEGGAGDAGEEVSATGSGNNGAPDSEDGSSYRHRLSNVNFINMGHLQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFHMHSHFDWSKYCWCIEGPRRLVVL 230
            L    F  G   ++ YLPD ++ +SAFL H        + +W  ++   L  +   +  ++A  +                      +EDGS    ++ +V  IN   ++ +KC+VDN + VD+  NQ+G + T+  LE  D+ +G NHLFKRS++L+K+W  YESR     + L  ++  AL T+VL + N +H  L +PL+V+  F  + S FDW +YC C+EG   L  +
Sbjct:   46 LQVDAFTFGSVPLKTYLPDGDIDLSAFLLHKPPPGSNIKDAWASKLAGFLELEQQKQLGQQADRQ----------------------AEDGSC---QVKDVQVIN-AEVKLLKCLVDN-IVVDVSFNQIGGLCTLNFLECVDRKIGCNHLFKRSVILVKAWCYYESRLLGAHHGL--LSTYALETLVLYIFNAYHRELRSPLKVLQKFLDVFSSFDWDRYCACLEGRIHLASI 249          
BLAST of mRNA_H-elongata_contig74373.15124.1 vs. uniprot
Match: UPI001244B807 (uncharacterized protein LOC115990562 n=1 Tax=Quercus lobata TaxID=97700 RepID=UPI001244B807)

HSP 1 Score: 110 bits (275), Expect = 1.240e-25
Identity = 55/133 (41.35%), Postives = 85/133 (63.91%), Query Frame = 0
Query:   92 RHRLSNVNFINMGHLQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFHMHSHFDWSKYCWCIEGP 224
            R  + N++ I+   ++++KC+V N + VDI  NQ+G + T+  LE+ D+L+GK+HLFKRS++LIK+W  YESR     + L  ++  AL T+VL + +Q H+ L+ PL V+  F    S FDW  YC  + GP
Sbjct:   52 RFEVKNIHCID-AEVKRVKCIVQN-IMVDISFNQLGGLCTLCFLEQVDRLVGKDHLFKRSIILIKAWCYYESRILGAHHGL--LSTYALETLVLYIFHQFHSSLNAPLAVLYRFLDYFSRFDWESYCISLSGP 180          
BLAST of mRNA_H-elongata_contig74373.15124.1 vs. uniprot
Match: A0A7N2LR45_QUELO (Uncharacterized protein n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2LR45_QUELO)

HSP 1 Score: 110 bits (275), Expect = 1.510e-25
Identity = 55/133 (41.35%), Postives = 85/133 (63.91%), Query Frame = 0
Query:   92 RHRLSNVNFINMGHLQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFHMHSHFDWSKYCWCIEGP 224
            R  + N++ I+   ++++KC+V N + VDI  NQ+G + T+  LE+ D+L+GK+HLFKRS++LIK+W  YESR     + L  ++  AL T+VL + +Q H+ L+ PL V+  F    S FDW  YC  + GP
Sbjct:   70 RFEVKNIHCID-AEVKRVKCIVQN-IMVDISFNQLGGLCTLCFLEQVDRLVGKDHLFKRSIILIKAWCYYESRILGAHHGL--LSTYALETLVLYIFHQFHSSLNAPLAVLYRFLDYFSRFDWESYCISLSGP 198          
BLAST of mRNA_H-elongata_contig74373.15124.1 vs. uniprot
Match: UPI000900E2E3 (uncharacterized protein LOC109159045 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI000900E2E3)

HSP 1 Score: 114 bits (285), Expect = 1.890e-25
Identity = 57/122 (46.72%), Postives = 79/122 (64.75%), Query Frame = 0
Query:  109 IKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFHMHSHFDWSKYCWCIEGPRRLVVL 230
            +KC+V N + VDI  NQ+G + T+  LE+ DQL+GK+HLFKRS++LIK+W  YESR     + L  I+  AL T+VL + + +H+ L  PL V+  F    S FDW KYC C+ GP R+  L
Sbjct:  146 VKCIVQN-IVVDISFNQIGGLCTLCFLEQVDQLIGKDHLFKRSIILIKAWCYYESRILGAHHGL--ISTYALETLVLYIFHLYHSTLDGPLAVLYKFLDYFSKFDWEKYCICLAGPVRISSL 264          
BLAST of mRNA_H-elongata_contig74373.15124.1 vs. uniprot
Match: J3NCN7_ORYBR (Uncharacterized protein n=7 Tax=Oryza brachyantha TaxID=4533 RepID=J3NCN7_ORYBR)

HSP 1 Score: 113 bits (282), Expect = 4.870e-25
Identity = 62/147 (42.18%), Postives = 87/147 (59.18%), Query Frame = 0
Query:   84 DSEDGSSYRHRLSNVNFINMGHLQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFHMHSHFDWSKYCWCIEGPRRLVVL 230
            +SE  S     +  + FIN   ++ IKCV++N + VDI  NQ+G ++T+  LE  D+ +GKNHLFKRS++LIK+W  YESR     + L  ++  AL T+VL + N  H  LH PL+ +  F    S FDW KYC  + GP  L  L
Sbjct:   62 ESEQDSGTELEIKGLQFIN-AEVKLIKCVIEN-IVVDISFNQIGGVSTLCFLELVDRKVGKNHLFKRSIMLIKAWCYYESRILGAHHGL--LSTYALETLVLYIFNIFHKSLHGPLEALYKFLEYFSKFDWEKYCISLNGPVLLSSL 204          
BLAST of mRNA_H-elongata_contig74373.15124.1 vs. uniprot
Match: J3MP51_ORYBR (Uncharacterized protein n=2 Tax=Oryza brachyantha TaxID=4533 RepID=J3MP51_ORYBR)

HSP 1 Score: 112 bits (281), Expect = 6.560e-25
Identity = 59/136 (43.38%), Postives = 83/136 (61.03%), Query Frame = 0
Query:   95 LSNVNFINMGHLQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKRSLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQVMALFFHMHSHFDWSKYCWCIEGPRRLVVL 230
            L  + FI+   ++ IKCV+DN + VDI  NQ+G ++T+  LE  D  +GKNHLFKRS++LIK+W  +ESR     + L  I+  AL T+V+ + N  H  LH+PL+ +  F    S FDW KYC  + GP  L  L
Sbjct:   54 LKGLQFID-AEVKLIKCVIDN-IVVDISFNQIGGVSTLCFLELVDHEVGKNHLFKRSIMLIKAWCYHESRILGAHHGL--ISTYALETLVVYIFNMFHKSLHSPLEALYKFLEYFSKFDWDKYCISLNGPVALSTL 185          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74373.15124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN92_ECTSI4.420e-12683.33Nucleotidyltransferase family protein n=1 Tax=Ecto... [more]
A0A6H5KVP2_9PHAE1.280e-12081.63PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A7N2R4X3_QUELO4.370e-2641.35Uncharacterized protein n=2 Tax=Quercus lobata Tax... [more]
D8SJ08_SELML8.530e-2643.07Uncharacterized protein (Fragment) n=2 Tax=Selagin... [more]
A0A061QQX2_9CHLO1.040e-2531.76Nt domain of poly polymerase and terminal uridylyl... [more]
UPI001244B8071.240e-2541.35uncharacterized protein LOC115990562 n=1 Tax=Querc... [more]
A0A7N2LR45_QUELO1.510e-2541.35Uncharacterized protein n=1 Tax=Quercus lobata Tax... [more]
UPI000900E2E31.890e-2546.72uncharacterized protein LOC109159045 n=2 Tax=Ipomo... [more]
J3NCN7_ORYBR4.870e-2542.18Uncharacterized protein n=7 Tax=Oryza brachyantha ... [more]
J3MP51_ORYBR6.560e-2543.38Uncharacterized protein n=2 Tax=Oryza brachyantha ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.1410.10coord: 107..227
e-value: 5.6E-7
score: 30.8
NoneNo IPR availablePANTHERPTHR45979FAMILY NOT NAMEDcoord: 1..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74373contigH-elongata_contig74373:378..2791 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74373.15124.1mRNA_H-elongata_contig74373.15124.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74373 378..2791 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74373.15124.1 ID=prot_H-elongata_contig74373.15124.1|Name=mRNA_H-elongata_contig74373.15124.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=232bp
VKRALGAQCFPVGGYAIQAYLPDEEVGISAFLCHGQEKSWFVRVNETLCK
VSSEASEEAATEGGAGDAGEEVSATGSGNNGAPDSEDGSSYRHRLSNVNF
INMGHLQKIKCVVDNQVAVDIGANQVGDIATVALLEETDQLLGKNHLFKR
SLLLIKSWWVYESRAYTGSNMLSRITEAALATMVLAVVNQHHARLHTPLQ
VMALFFHMHSHFDWSKYCWCIEGPRRLVVLNT
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