prot_H-elongata_contig74314.15120.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74314.15120.1
Unique Nameprot_H-elongata_contig74314.15120.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length427
Homology
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BLAST of mRNA_H-elongata_contig74314.15120.1 vs. uniprot
Match: D7G0Z5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z5_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 1.970e-63
Identity = 240/481 (49.90%), Postives = 263/481 (54.68%), Query Frame = 0 
Query:    1 MPGRVGKQCRERYLNHLDPSLRHGPWTEEEEALLLSLHARLKNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKSLHRSNSSGAATS--SVPP----------APARLNRAMSSDTGEIAASXXXXXXXXXXXXXMPVAVVQGGSPLGSDRASSSSREGYGRGSAEGDGRRGLSLDEKEQQSIIDAREAAEAGAGLVKLSLTAASTARAALEHSNFDSGGNGSVSGGG--------KRPPTSPVSPRY---SLEQQQ-----------IPMVSPRFSHGQFHHQPPYVXXXXXXXXXXXXXXXXXXSPPAGC----ASPRFSRREGQPARSPMRPPRSPPLAGESMTQPLPSYRSCGGDVGSGXXXXXSGGGPPNGPVQAPYSPRHAEQSPS-----------------LAVPRSPASENVRNAVPVSGSGNGXXXXGQASSGIRRA-QGVAV-DVDAPRGAVPARAAAGGGVATWSWG 424
            MPGRVGKQCRERYLNHLDPSLRHGPWTEEEE LLLSLHARL NQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEK+LHR+ SSG+ATS  SVPP          AP R  R +SS T E A  XXXXXXXXXXXXX                                             +S+++AREAAEAGAGLVKLSLTAASTARAALE SNF++G  G+  GG         +RPPTSP+SPR    S E QQ           +P+VSPRFS     HQ    XXXXXXXXXXXXXXXXXX          +SPR+ R E  P R+P                PLPS R   G VG  XXXXX                                         LA+PRSPASEN RN+         XXXX           QG+A  D DA R AV AR A+ GGVA W+WG
Sbjct:  656 MPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKNLHRAGSSGSATSAASVPPLPVSATASGGAPPRHGRTLSSGTAETAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXRSMMEAREAAEAGAGLVKLSLTAASTARAALERSNFETGRAGAGIGGXXXXXXAMERRPPTSPISPRSARRSAEPQQQSPRHRQSHGPVPVVSPRFSRAGQQHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSPRYGRHEMAPRRTP----------------PLPSQRGLSG-VGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLAIPRSPASENFRNSXXXXXXXXXXXXXXXXXXXXXXXXQGMAPEDADARRAAVAARMASNGGVAAWAWG 1110
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BLAST of mRNA_H-elongata_contig74314.15120.1 vs. uniprot
Match: A0A6H5L2W7_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W7_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 3.100e-55
Identity = 229/474 (48.31%), Postives = 250/474 (52.74%), Query Frame = 0 
Query:    1 MPGRVGKQCRERYLNHLDPSLRHGPWTEEEEALLLSLHARLKNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKSLHRSNSSGAATSSVPPAPARLNRAMSSDTGEIAASXXXXXXXXXXXXXMPVAVVQGGSPLGSDRASSSSREGYGRGSAEGDGRRGLSLDEKEQ---QSIIDAREAAEAGAGLVKLSLTAASTARAALEHSNFDSGGNGSVSGGG-------KRPPTSPVSPR---YSLEQQQIPMVSPRFSHGQFHHQPPYVXXXXXXXXXXXXXXXXXX----------------SPPAGC----ASPRFSRREGQPARSPMRPPRSPPLAGESMTQPLPSYRSCGGDVGSGXXXXXSGGGPPNGPVQAP---YSPRHAEQSPSL-------------AVPRSPASENVRNAVPVSGSGNGXXXXGQASSGIRRAQGVAV-DVDAPRGAVPARAAAGGGVATWSWG 424
            MPGRVGKQCRERYLNHLDPSLRHGPWTEEEE LLLSLHARL NQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEK+LHR+ SSG+AT                        XXXXXXXXXXXXX                                                +S+++AREAAEAGAGLVKLSLTAASTARAALE SNF++G  G+  GGG       +RPPTSP+SPR   +S E QQ    SPR  H Q H   P VXXXXXXXXXXXXXXX                   SPPAG     +SPR+ R E  P R+P                PLPS R   G VG  XXXXX                Y+P                      A+PRSPASEN RN          XXXX          QG+A  D DA R AV AR A+ GGVA W+WG
Sbjct: 1044 MPGRVGKQCRERYLNHLDPSLRHGPWTEEEERLLLSLHARLNNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKNLHRAGSSGSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSMMEAREAAEAGAGLVKLSLTAASTARAALERSNFETGKAGAGIGGGSNGGAMERRPPTSPISPRSARWSTEPQQ---QSPR--HRQSHAPVPVVXXXXXXXXXXXXXXXRQHPQDTCSSGRALSPPSASPPAGSGVGPSSPRYGRHEMVPRRTP----------------PLPSQRGLSG-VGXXXXXXXXXXXXXXXXXXXXXXAYTPPXXXXXXXXXXXXXXXXXXXXSAIPRSPASENFRNXXXXXXXXXXXXXXXXXXXXXXX-QGMAPEDADARRAAVAARMASNGGVAAWAWG 1494
[Close]
BLAST of mRNA_H-elongata_contig74314.15120.1 vs. uniprot
Match: A0A835YSH7_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSH7_9STRA)

HSP 1 Score: 118 bits (296), Expect = 2.880e-28
Identity = 53/70 (75.71%), Postives = 60/70 (85.71%), Query Frame = 0 
Query:    1 MPGRVGKQCRERYLNHLDPSLRHGPWTEEEEALLLSLHARLKNQWAEIARQIPGRSDNDVKNRWNLVCRR 70
            MPGRVGKQCRERYLNHLDPSL+  PWT EE+ALL  LH ++ N WA+IARQ+PGR DNDVKNRWNL+ RR
Sbjct:   85 MPGRVGKQCRERYLNHLDPSLKKTPWTPEEDALLTELHTKMNNSWADIARQMPGRCDNDVKNRWNLIQRR 154
[Close]
BLAST of mRNA_H-elongata_contig74314.15120.1 vs. uniprot
Match: A0A836CND7_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND7_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.530e-23
Identity = 52/76 (68.42%), Postives = 58/76 (76.32%), Query Frame = 0 
Query:    1 MPGRVGKQCRERYLNHLDPSLRHGPWTEEEEALLLSLHARLKNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEK 76
            MPGRV KQCRERYLNHLDP L+ GPWT EEE +LL L      QWAEI RQ+PGRS NDVKNR+NL+ RR + A K
Sbjct:   49 MPGRVAKQCRERYLNHLDPKLQRGPWTPEEEQVLLRLCEGQNRQWAEICRQLPGRSYNDVKNRYNLIQRRLKRASK 124
[Close]
BLAST of mRNA_H-elongata_contig74314.15120.1 vs. uniprot
Match: B8BTP0_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTP0_THAPS)

HSP 1 Score: 99.0 bits (245), Expect = 1.280e-21
Identity = 40/64 (62.50%), Postives = 53/64 (82.81%), Query Frame = 0 
Query:    1 MPGRVGKQCRERYLNHLDPSLRHGPWTEEEEALLLSLHARLKNQWAEIARQIPGRSDNDVKNRW 64
            +PGR GKQCRERY+NHLDP L+ G W ++EEA+L+++H  L N+W  I++Q+PGRSDNDVKN W
Sbjct:   32 LPGRTGKQCRERYVNHLDPELKAGEWNDDEEAILIAMHKHLGNKWTVISKQLPGRSDNDVKNHW 95
[Close]
BLAST of mRNA_H-elongata_contig74314.15120.1 vs. uniprot
Match: A2FE16_TRIVA (Myb-like DNA-binding domain containing protein n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2FE16_TRIVA)

HSP 1 Score: 104 bits (259), Expect = 1.740e-21
Identity = 45/70 (64.29%), Postives = 55/70 (78.57%), Query Frame = 0 
Query:    1 MPGRVGKQCRERYLNHLDPSLRHGPWTEEEEALLLSLHARLKNQWAEIARQIPGRSDNDVKNRWNLVCRR 70
            +PGR+GKQCRER+ NHLDPS  HG WTEEE+A LL LHA+  NQW +IA  +PGRSDN +KNRWN   ++
Sbjct:  105 LPGRIGKQCRERWRNHLDPSNNHGAWTEEEDAKLLELHAQFGNQWVKIASMMPGRSDNSIKNRWNSTLKK 174
[Close]
BLAST of mRNA_H-elongata_contig74314.15120.1 vs. uniprot
Match: B7G9A5_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G9A5_PHATC)

HSP 1 Score: 98.2 bits (243), Expect = 2.320e-21
Identity = 41/71 (57.75%), Postives = 56/71 (78.87%), Query Frame = 0 
Query:    1 MPGRVGKQCRERYLNHLDPSLRHGPWTEEEEALLLSLHARLKNQWAEIARQIPGRSDNDVKNRWNLVCRRE 71
            +PGR GKQCRER++NHLDP L+ G WT++EEA+L+++H    N+WA IA+ +PGRSDNDVKN W    +R+
Sbjct:   30 LPGRQGKQCRERFVNHLDPELKKGEWTDDEEAILIAMHEHHGNRWANIAKNLPGRSDNDVKNHWYSTIQRK 100
[Close]
BLAST of mRNA_H-elongata_contig74314.15120.1 vs. uniprot
Match: A0A1E7EVM5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EVM5_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 5.550e-21
Identity = 41/71 (57.75%), Postives = 57/71 (80.28%), Query Frame = 0 
Query:    1 MPGRVGKQCRERYLNHLDPSLRHGPWTEEEEALLLSLHARLKNQWAEIARQIPGRSDNDVKNRWNLVCRRE 71
            +PGR GKQCRER++NHLDP L+ G WT++EEA+L+++H    N+WA I++Q+PGRSDNDVKN W    +R+
Sbjct:   61 LPGRQGKQCRERFVNHLDPELKKGEWTDDEEAILIAMHELHGNRWANISKQLPGRSDNDVKNHWYSTIQRK 131
[Close]
BLAST of mRNA_H-elongata_contig74314.15120.1 vs. uniprot
Match: D7FJZ9_ECTSI (Putative c-myb-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ9_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 1.630e-20
Identity = 57/99 (57.58%), Postives = 71/99 (71.72%), Query Frame = 0 
Query:    1 MPGRVGKQCRERYLNHLDPSLRHG-PWTEEEEALLLSLHARLKNQWAEIARQIPGRSDNDVKNRWNLVCRRERAAEKSLHRSNSSGAATSSVPPAPARL 98
            +PGR+ KQCRERYLNHLDPSLR   PWTE+EEALL+ L    +NQWAEI RQ+ GRS NDV+NR+NL+ RR + A+        S   T++ PPA A+L
Sbjct:  325 IPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVQNRFNLIQRRNKRAQ-------GSPTTTTTAPPATAQL 416
[Close]
BLAST of mRNA_H-elongata_contig74314.15120.1 vs. uniprot
Match: A0A7S3APN2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3APN2_9EUKA)

HSP 1 Score: 100 bits (249), Expect = 2.130e-20
Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = 0 
Query:    1 MPGRVGKQCRERYLNHLDPSLRHGPWTEEEEALLLSLHARLKNQWAEIARQIPGRSDNDVKNRWNLVCRR 70
            +PGR GKQCRER+ N+LDPSL+ G WT EE+ ++L +HA+L  +WAEIA+ +PGRSDN VKNRW   C R
Sbjct:   55 LPGRTGKQCRERWCNNLDPSLKKGAWTAEEDQIILKMHAKLGTRWAEIAKSLPGRSDNSVKNRWYSTCSR 124
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74314.15120.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0Z5_ECTSI1.970e-6349.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2W7_9PHAE3.100e-5548.31MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A835YSH7_9STRA2.880e-2875.71Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A836CND7_9STRA1.530e-2368.42Homeodomain-like protein n=1 Tax=Tribonema minus T... [more]
B8BTP0_THAPS1.280e-2162.50Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A2FE16_TRIVA1.740e-2164.29Myb-like DNA-binding domain containing protein n=1... [more]
B7G9A5_PHATC2.320e-2157.75Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
A0A1E7EVM5_9STRA5.550e-2157.75Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
D7FJZ9_ECTSI1.630e-2057.58Putative c-myb-like transcription factor n=1 Tax=E... [more]
A0A7S3APN2_9EUKA2.130e-2061.43Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 22..70
e-value: 1.6E-15
score: 67.6
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 24..65
e-value: 1.3E-14
score: 54.1
NoneNo IPR availableGENE3D1.10.10.60coord: 1..22
e-value: 8.9E-7
score: 30.7
NoneNo IPR availableGENE3D1.10.10.60coord: 25..84
e-value: 3.7E-18
score: 67.1
NoneNo IPR availablePANTHERPTHR45614:SF1MYB PROTEINcoord: 1..274
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 1..274
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 18..72
score: 23.824
IPR017877Myb-like domainPROSITEPS50090MYB_LIKEcoord: 1..17
score: 4.368
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 1..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74314contigH-elongata_contig74314:705..2944 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74314.15120.1mRNA_H-elongata_contig74314.15120.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74314 705..2962 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74314.15120.1 ID=prot_H-elongata_contig74314.15120.1|Name=mRNA_H-elongata_contig74314.15120.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=427bp
MPGRVGKQCRERYLNHLDPSLRHGPWTEEEEALLLSLHARLKNQWAEIAR
QIPGRSDNDVKNRWNLVCRRERAAEKSLHRSNSSGAATSSVPPAPARLNR
AMSSDTGEIAASAAAAAAAADATAPMPVAVVQGGSPLGSDRASSSSREGY
GRGSAEGDGRRGLSLDEKEQQSIIDAREAAEAGAGLVKLSLTAASTARAA
LEHSNFDSGGNGSVSGGGKRPPTSPVSPRYSLEQQQIPMVSPRFSHGQFH
HQPPYVYQQQLHHQQQQHHASNAASPPAGCASPRFSRREGQPARSPMRPP
RSPPLAGESMTQPLPSYRSCGGDVGSGGDVGSSGGGPPNGPVQAPYSPRH
AEQSPSLAVPRSPASENVRNAVPVSGSGNGGNGGGQASSGIRRAQGVAVD
VDAPRGAVPARAAAGGGVATWSWGRM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR015495Myb-like_TF
IPR017930Myb_dom
IPR017877Myb-like_dom
IPR009057Homeobox-like_sf