prot_H-elongata_contig74168.15109.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74168.15109.1
Unique Nameprot_H-elongata_contig74168.15109.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length159
Homology
BLAST of mRNA_H-elongata_contig74168.15109.1 vs. uniprot
Match: D7G8U2_ECTSI (1-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8U2_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 2.260e-80
Identity = 132/159 (83.02%), Postives = 146/159 (91.82%), Query Frame = 0
Query:    1 ILSLFPSRS-QKVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNLVIMAPSDEIELMNMIQTAYKIDDRPSAVRYPRGTGYGLEKLRTLFGYDLDEMPTRGKELEIGKGRIVRRPRATARQKAVIVSVGTRLAPSLEAAIQLEVCLFL 158
            + S F  R+  +V+HDVVVQKLPVR ILDRAGLVGNDGPTHHGSFDLTYLGTLP++VIMAPSDEIELMNMIQTAY IDD+PS VRYPRGTGYGLEKLR+LFGY+LDEMP +G+E+EIGKGRIVRRPRATARQKAVI+S+GTRLAPSLEAAIQLE   FL
Sbjct:  487 VYSTFMQRAYDQVMHDVVVQKLPVRMILDRAGLVGNDGPTHHGSFDLTYLGTLPHIVIMAPSDEIELMNMIQTAYAIDDKPSVVRYPRGTGYGLEKLRSLFGYELDEMPAKGEEVEIGKGRIVRRPRATARQKAVILSLGTRLAPSLEAAIQLEDSFFL 645          
BLAST of mRNA_H-elongata_contig74168.15109.1 vs. uniprot
Match: A0A7S2CRZ0_9STRA (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CRZ0_9STRA)

HSP 1 Score: 217 bits (552), Expect = 6.200e-64
Identity = 107/154 (69.48%), Postives = 125/154 (81.17%), Query Frame = 0
Query:    1 ILSLFPSRS-QKVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNLVIMAPSDEIELMNMIQTAYKIDDRPSAVRYPRGTGYGLEKLRTLFGYDLDEMPTRGKELEIGKGRIVRRPRATARQKAVIVSVGTRLAPSLEAAIQLE 153
            I S F  R   +V+HDVV+Q LPVR ILDRAGLVGNDGPTHHGSFDL Y+G LPN+VIMAPSDE+ELMNMIQTAY IDD PS VRYPRGTGYG+EKL +LF Y LDEMP +GK +EIGKGRI+R  R+ A+ +  ++S+GTRL  +LEAA  LE
Sbjct:  423 IYSTFMQRGYDQVVHDVVIQGLPVRMILDRAGLVGNDGPTHHGSFDLAYMGCLPNIVIMAPSDELELMNMIQTAYGIDDMPSVVRYPRGTGYGIEKLNSLFNYKLDEMPEKGKAVEIGKGRIIREGRSKAKTQVAVLSIGTRLGQALEAANTLE 576          
BLAST of mRNA_H-elongata_contig74168.15109.1 vs. uniprot
Match: A0A835ZBE2_9STRA (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBE2_9STRA)

HSP 1 Score: 207 bits (526), Expect = 2.070e-61
Identity = 105/154 (68.18%), Postives = 123/154 (79.87%), Query Frame = 0
Query:    1 ILSLFPSRS-QKVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNLVIMAPSDEIELMNMIQTAYKIDDRPSAVRYPRGTGYGLEKLRTLFGYDLDEMPTRGKELEIGKGRIVRRPRATARQKAVIVSVGTRLAPSLEAAIQLE 153
            I S F  R+  +V+HDVV+QKLPVR ILDRAGLVGNDGPTHHGS+DL YLGTLP++VIMAPSDEIELMNMIQTAY+ D  PS VRYPRG+GYG+  L  +    LD MPTRG  L+IGKGRIVR  RA A+QKA I+S+G RL P+ +AA +LE
Sbjct:  267 IYSTFMQRAYDQVMHDVVIQKLPVRMILDRAGLVGNDGPTHHGSYDLAYLGTLPDIVIMAPSDEIELMNMIQTAYEYDAGPSVVRYPRGSGYGMAVLNNVLDAGLDVMPTRGVGLQIGKGRIVREARAGAKQKAAILSIGARLIPACQAAAKLE 420          
BLAST of mRNA_H-elongata_contig74168.15109.1 vs. uniprot
Match: A0A8J2SUK2_9STRA (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUK2_9STRA)

HSP 1 Score: 206 bits (524), Expect = 9.380e-60
Identity = 102/154 (66.23%), Postives = 124/154 (80.52%), Query Frame = 0
Query:    1 ILSLFPSRS-QKVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNLVIMAPSDEIELMNMIQTAYKIDDRPSAVRYPRGTGYGLEKLRTLFGYDLDEMPTRGKELEIGKGRIVRRPRATARQKAVIVSVGTRLAPSLEAAIQLE 153
            I S F  R   +++HDVV+Q LPVRFILDRAGLVGNDGPTHHGSFDLTYLG +PNLVIMAP++E++L+NM+ TA  IDD+PS VRYPRGTGYGLEKL  LFG +L EMP  G+ L +GKGRI++  RA A +K  I+S+GTRLA S EAA ++E
Sbjct:  466 IYSTFMQRGYDQLVHDVVIQNLPVRFILDRAGLVGNDGPTHHGSFDLTYLGCMPNLVIMAPAEEVDLINMVATAAAIDDKPSVVRYPRGTGYGLEKLNDLFGLNLKEMPEAGEVLPMGKGRIIKEGRAGASKKVAILSLGTRLAASCEAAAEIE 619          
BLAST of mRNA_H-elongata_contig74168.15109.1 vs. uniprot
Match: A0A0G4GWE9_VITBC (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GWE9_VITBC)

HSP 1 Score: 203 bits (516), Expect = 1.280e-58
Identity = 103/154 (66.88%), Postives = 121/154 (78.57%), Query Frame = 0
Query:    1 ILSLFPSRS-QKVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNLVIMAPSDEIELMNMIQTAYKIDDRPSAVRYPRGTGYGLEKLRTLFGYDLDEMPTRGKELEIGKGRIVRRPRATARQKAVIVSVGTRLAPSLEAAIQLE 153
            I S F  R+  +V+HD V+Q+LPVRFILDRAGLVG DG THHGSFDL YLGTLP+LVIMAPSDE+ELMN IQTAY+IDD+PSAVRYPRG GYGLE L   F Y LDEMPT+G  + IGKGRI++     A  K  I+S+GTRL+ ++EAA  LE
Sbjct:  462 IYSTFLQRAYDQVIHDCVLQRLPVRFILDRAGLVGADGATHHGSFDLAYLGTLPDLVIMAPSDEVELMNHIQTAYEIDDKPSAVRYPRGNGYGLEYLNKHFNYGLDEMPTKGTAVPIGKGRIIKEANEDAPSKVAILSIGTRLSAAIEAAHALE 615          
BLAST of mRNA_H-elongata_contig74168.15109.1 vs. uniprot
Match: Q5ENQ5_DIALT (1-deoxy-D-xylulose-5-phosphate synthase (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=Q5ENQ5_DIALT)

HSP 1 Score: 191 bits (485), Expect = 1.390e-58
Identity = 94/154 (61.04%), Postives = 119/154 (77.27%), Query Frame = 0
Query:    1 ILSLFPSRS-QKVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNLVIMAPSDEIELMNMIQTAYKIDDRPSAVRYPRGTGYGLEKLRTLFGYDLDEMPTRGKELEIGKGRIVRRPRATARQKAVIVSVGTRLAPSLEAAIQLE 153
            I S F  R   +V+HDVV QKLPVRFILDRAGLVGNDGPTHHGSFDL YLG LP+LVIMAPSDE+EL++MI TAY+++  PSA+R+PRG   GLE +R   GYD+  MP +G  L IG+GR V+R  A+  ++  ++S+GTRLAP+++AA  LE
Sbjct:   11 IYSTFLQRGYDQVVHDVVTQKLPVRFILDRAGLVGNDGPTHHGSFDLAYLGCLPDLVIMAPSDELELLHMIATAYELESLPSAIRFPRGNALGLEAMREQLGYDISAMPAKGTALPIGRGRYVKRADASRSKRVALLSLGTRLAPAMQAARALE 164          
BLAST of mRNA_H-elongata_contig74168.15109.1 vs. uniprot
Match: A0A7S2XUY7_9STRA (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUY7_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.260e-57
Identity = 99/156 (63.46%), Postives = 124/156 (79.49%), Query Frame = 0
Query:    1 ILSLFPSRS-QKVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNLVIMAPSDEIELMNMIQTAYKIDDRPSAVRYPRGTGYGLEKLRTLFGYDLDEMPTRGKELEIGKGRIVRRPRATA--RQKAVIVSVGTRLAPSLEAAIQLE 153
            I S F  R   +V+HDVV+QKLPVR ILDR GLVGNDGPTHHG+FDL Y+GTLPNL+IMAPSDE+EL NMIQTAY ID  P+ VR+PRG G GL+KL  LFGY+L+E P+ G+ L +GKGRI++  ++ +  + K  I+S+GTRLAPS+EAA Q+E
Sbjct:  454 IYSTFMQRGYDQVVHDVVLQKLPVRMILDRGGLVGNDGPTHHGTFDLAYMGTLPNLIIMAPSDEVELKNMIQTAYDIDYLPTVVRFPRGNGLGLQKLNDLFGYNLEEYPSEGESLPVGKGRIIKEAKSGSEVKDKVAILSLGTRLAPSVEAARQIE 609          
BLAST of mRNA_H-elongata_contig74168.15109.1 vs. uniprot
Match: A0A0G4HAX7_9ALVE (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HAX7_9ALVE)

HSP 1 Score: 200 bits (508), Expect = 1.590e-57
Identity = 99/154 (64.29%), Postives = 123/154 (79.87%), Query Frame = 0
Query:    1 ILSLFPSRS-QKVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNLVIMAPSDEIELMNMIQTAYKIDDRPSAVRYPRGTGYGLEKLRTLFGYDLDEMPTRGKELEIGKGRIVRRPRATARQKAVIVSVGTRLAPSLEAAIQLE 153
            + S F  R+  +V+HDV +QKLPVR ILDRAGLVG DG THHGSFDL YL  +P+LVIMAPSDE+ELMNM+QTAY+IDD PSAVRYPRG GYG+E L + FGY+L EMPT G  + IGKGRI+++ R  A +K  I+S+GTRLA +++AA +LE
Sbjct:  453 VYSTFLQRAYDQVVHDVALQKLPVRLILDRAGLVGADGATHHGSFDLAYLAAIPDLVIMAPSDEVELMNMLQTAYEIDDGPSAVRYPRGNGYGMEFLNSEFGYELSEMPTEGVAVPIGKGRIIKKAREGAERKVAILSIGTRLAVAVDAAKKLE 606          
BLAST of mRNA_H-elongata_contig74168.15109.1 vs. uniprot
Match: A0A7S1TWG0_9STRA (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWG0_9STRA)

HSP 1 Score: 199 bits (506), Expect = 4.150e-57
Identity = 99/154 (64.29%), Postives = 121/154 (78.57%), Query Frame = 0
Query:    1 ILSLFPSRS-QKVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNLVIMAPSDEIELMNMIQTAYKIDDRPSAVRYPRGTGYGLEKLRTLFGYDLDEMPTRGKELEIGKGRIVRRPRATARQKAVIVSVGTRLAPSLEAAIQLE 153
            I S F  R   +V+HD V+Q LPVR +LDRAGLVGNDGPTHHGSFDL YLG LP +VIMAPSDE+ELMNM+ T  KIDD+ SA+RYPRGTGYGLE L +LFGY L+EMP RG+ L IGKGRIV++     R+K  ++++GTRL+ +L AA +LE
Sbjct:  480 IYSTFLQRGYDQVMHDCVLQHLPVRLVLDRAGLVGNDGPTHHGSFDLAYLGALPEIVIMAPSDEVELMNMVATQVKIDDKTSAMRYPRGTGYGLETLNSLFGYGLEEMPKRGEVLPIGKGRIVKQGSKQGREKVALLTLGTRLSSALIAAKELE 633          
BLAST of mRNA_H-elongata_contig74168.15109.1 vs. uniprot
Match: A0A7S4HSF9_9EUKA (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HSF9_9EUKA)

HSP 1 Score: 189 bits (480), Expect = 5.760e-57
Identity = 93/154 (60.39%), Postives = 116/154 (75.32%), Query Frame = 0
Query:    1 ILSLFPSRS-QKVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLGTLPNLVIMAPSDEIELMNMIQTAYKIDDRPSAVRYPRGTGYGLEKLRTLFGYDLDEMPTRGKELEIGKGRIVRRPRATARQKAVIVSVGTRLAPSLEAAIQLE 153
            I S F  R+  +V+HD  +Q LPVRFILDRAGLVGNDGPTHHG++DL YLG +P L I APSDE+EL NMIQT Y++D  PSA+RYPRG+  G++KL  LF Y L EMP++G  L +GKGRIVR PR  A +K  I+S+GTRLA ++ +A  LE
Sbjct:   33 IYSTFLQRAYDQVIHDCALQALPVRFILDRAGLVGNDGPTHHGNYDLAYLGCIPGLAICAPSDEVELQNMIQTVYEMDSMPSALRYPRGSALGIDKLNDLFDYGLSEMPSKGTALPVGKGRIVREPRDGATKKVAILSIGTRLAAAVTSARALE 186          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74168.15109.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8U2_ECTSI2.260e-8083.021-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=Ec... [more]
A0A7S2CRZ0_9STRA6.200e-6469.481-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Fl... [more]
A0A835ZBE2_9STRA2.070e-6168.181-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Tr... [more]
A0A8J2SUK2_9STRA9.380e-6066.231-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Pe... [more]
A0A0G4GWE9_VITBC1.280e-5866.881-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Vi... [more]
Q5ENQ5_DIALT1.390e-5861.041-deoxy-D-xylulose-5-phosphate synthase (Fragment)... [more]
A0A7S2XUY7_9STRA1.260e-5763.461-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Fi... [more]
A0A0G4HAX7_9ALVE1.590e-5764.291-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Ch... [more]
A0A7S1TWG0_9STRA4.150e-5764.291-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Ph... [more]
A0A7S4HSF9_9EUKA5.760e-5760.391-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Pr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.970coord: 1..96
e-value: 4.3E-27
score: 96.3
IPR005475Transketolase-like, pyrimidine-binding domainPFAMPF02779Transket_pyrcoord: 10..88
e-value: 2.0E-14
score: 53.7
IPR005477Deoxyxylulose-5-phosphate synthasePANTHERPTHR43322FAMILY NOT NAMEDcoord: 10..153
IPR020826Transketolase binding sitePROSITEPS00802TRANSKETOLASE_2coord: 34..50
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 3..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74168contigH-elongata_contig74168:53..1696 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74168.15109.1mRNA_H-elongata_contig74168.15109.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74168 53..1696 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74168.15109.1 ID=prot_H-elongata_contig74168.15109.1|Name=mRNA_H-elongata_contig74168.15109.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=159bp
ILSLFPSRSQKVLHDVVVQKLPVRFILDRAGLVGNDGPTHHGSFDLTYLG
TLPNLVIMAPSDEIELMNMIQTAYKIDDRPSAVRYPRGTGYGLEKLRTLF
GYDLDEMPTRGKELEIGKGRIVRRPRATARQKAVIVSVGTRLAPSLEAAI
QLEVCLFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005475Transketolase-like_Pyr-bd
IPR005477Dxylulose-5-P_synthase
IPR020826Transketolase_BS
IPR029061THDP-binding