prot_H-elongata_contig74130.15106.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74130.15106.1
Unique Nameprot_H-elongata_contig74130.15106.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length183
Homology
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 1.060e-32
Identity = 65/145 (44.83%), Postives = 94/145 (64.83%), Query Frame = 0
Query:    5 PYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSFSLVQKVTAAASSESEYVALAEMVNELRFLRQVKAFMTPQSTSP 149
            P+RE++G+LMW AT TRPDI+ A   +A++  +P   HWRA    L Y+ RT DLGIT+ R    G  +  + DADY +    RRSVS G V+  GG +S FS  QK    +++E+EYV+LA+++ E+ FLRQV+ F+ P++  P
Sbjct:   32 PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMP 176          
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 2.200e-32
Identity = 67/145 (46.21%), Postives = 94/145 (64.83%), Query Frame = 0
Query:    5 PYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSFSLVQKVTAAASSESEYVALAEMVNELRFLRQVKAFMTPQSTSP 149
            P+RE++G+LMW AT TRPDI+ A   +A++  +P   HWRA    L Y+ RT DLGIT+ R    G  +  ++DADY +    RRSVS G V+  GG IS FS  QK    +++E+EYV+LA+++ E+ FLRQV  FM P++  P
Sbjct:  216 PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMP 360          
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 5.090e-32
Identity = 66/145 (45.52%), Postives = 94/145 (64.83%), Query Frame = 0
Query:    5 PYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSFSLVQKVTAAASSESEYVALAEMVNELRFLRQVKAFMTPQSTSP 149
            P+RE++G+LMW AT TRP+I+ AA  +A++  +P   HWRA    L Y+ RT DLGIT+GR    G  +  + DADY +    RRSVS G V+   G IS FS  Q+    +++E+EYV+LA+++ E+ FLRQV  FM P++  P
Sbjct:   71 PFRELIGSLMWLATQTRPNIANAARAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMP 215          
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.100e-31
Identity = 67/145 (46.21%), Postives = 94/145 (64.83%), Query Frame = 0
Query:    5 PYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSFSLVQKVTAAASSESEYVALAEMVNELRFLRQVKAFMTPQSTSP 149
            P+RE++G+LMW AT TRPDI+ A   +A++  +P   HWRA    L Y+ RT DLGIT+ R    G  +  ++DADY +    RRSVS G V+  GG IS FS  QK    +++E+EYV+LA+++ E+ FLRQV  FM P++  P
Sbjct:  390 PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMP 534          
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 1.210e-31
Identity = 64/146 (43.84%), Postives = 94/146 (64.38%), Query Frame = 0
Query:    4 IPYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSFSLVQKVTAAASSESEYVALAEMVNELRFLRQVKAFMTPQSTSP 149
            +P+RE+VG+LMW AT TRPDI+ A   +A++  +P   HW+AA   L Y+ RT  +GIT+ R    G  +  ++DADY +    RRSVS G V+  GG ++ FS  QK    +++E+EYVA+A+++ E+ FLRQV  FM P +  P
Sbjct:   98 VPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMP 243          
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 1.220e-31
Identity = 64/146 (43.84%), Postives = 95/146 (65.07%), Query Frame = 0
Query:    4 IPYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSFSLVQKVTAAASSESEYVALAEMVNELRFLRQVKAFMTPQSTSP 149
            +P+RE+VG+LMW AT TRPDI+ A   +A++  +P   HW+AA   L Y+ RT  +GIT+ R    G  +  ++DADY +    RRSVS G V+  GG ++ FS  QK    +++E+EYVA+A+++ E+ FLRQV  FM P ++ P
Sbjct:  153 VPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMP 298          
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 1.390e-31
Identity = 66/145 (45.52%), Postives = 92/145 (63.45%), Query Frame = 0
Query:    5 PYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSFSLVQKVTAAASSESEYVALAEMVNELRFLRQVKAFMTPQSTSP 149
            P+RE++G+LMW AT TRPDI+ A   +A++  +P   HWRA    L Y+ RT D GIT+ R    G  +  + DADY +    RRSVS G V+  GG IS FS  QK    +++E+EYV+LA+++ E+ FLRQV  FM P++  P
Sbjct:  115 PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMP 259          
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.830e-31
Identity = 67/145 (46.21%), Postives = 94/145 (64.83%), Query Frame = 0
Query:    5 PYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSFSLVQKVTAAASSESEYVALAEMVNELRFLRQVKAFMTPQSTSP 149
            P+RE++G+LMW AT TRPDI+ A   +A++  +P   HWRA    L Y+ RT DLGIT+ R    G  +  ++DADY +    RRSVS G V+  GG IS FS  QK    +++E+EYV+LA+++ E+ FLRQV  FM P++  P
Sbjct:  911 PFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMP 1055          
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6H5KSZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ5_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 5.070e-31
Identity = 65/141 (46.10%), Postives = 88/141 (62.41%), Query Frame = 0
Query:    5 PYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSFSLVQKVTAAASSESEYVALAEMVNELRFLRQVKAFMTPQ 145
            P+RE+VG+LMW AT TRP I+ A   +A++  +P   HW AA   L Y  RT   GI++ R   EG  L  + DAD+ +    RRSVS G V   GGA+S FS+ QK    +++E+EYVAL ++V E+ FLRQ+  FM PQ
Sbjct:   70 PFRELVGSLMWLATQTRPAIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSITQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQ 210          
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Match: A0A6H5KRB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRB4_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 6.460e-31
Identity = 66/147 (44.90%), Postives = 89/147 (60.54%), Query Frame = 0
Query:    3 QIPYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKALQYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAGGAISSFSLVQKVTAAASSESEYVALAEMVNELRFLRQVKAFMTPQSTSP 149
            + P+RE+VG+LMW AT TRPDI+ A   +A++  +P   HW AA   L Y  RT   GI++ R   EG  L  + DAD+ +    RRSVS G V   GGA+S FS  QK    +++E+EYVAL ++V E+ FLRQ+  F  PQ   P
Sbjct:   96 EFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFTLPQVGMP 242          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74130.15106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTK6_9PHAE1.060e-3244.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLN0_9PHAE2.200e-3246.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KD60_9PHAE5.090e-3245.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQB8_9PHAE1.100e-3146.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KP70_9PHAE1.210e-3143.84Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE1.220e-3143.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KR24_9PHAE1.390e-3145.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2R1_9PHAE1.830e-3146.21Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5KSZ5_9PHAE5.070e-3146.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRB4_9PHAE6.460e-3144.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 5..138
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 5..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74130contigH-elongata_contig74130:1958..2506 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74130.15106.1mRNA_H-elongata_contig74130.15106.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74130 1958..3058 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74130.15106.1 ID=prot_H-elongata_contig74130.15106.1|Name=mRNA_H-elongata_contig74130.15106.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=183bp
MRQIPYREIVGTLMWAATMTRPDISFAAHQLAKFNDNPGPKHWRAAQKAL
QYLWRTRDLGITYGREPGEGRKLSAWIDADYGTCLDTRRSVSVGAVIMAG
GAISSFSLVQKVTAAASSESEYVALAEMVNELRFLRQVKAFMTPQSTSPS
RYTRTTKAQSRWRKTASTVDERGTWTSNITLSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like