prot_H-elongata_contig74104.15105.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74104.15105.1
Unique Nameprot_H-elongata_contig74104.15105.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length163
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74104.15105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..163
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..55
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableTMHMMTMhelixcoord: 34..56
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74104contigH-elongata_contig74104:1285..2289 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74104.15105.1mRNA_H-elongata_contig74104.15105.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74104 1285..2289 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74104.15105.1 ID=prot_H-elongata_contig74104.15105.1|Name=mRNA_H-elongata_contig74104.15105.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=163bp
YFRDGASALAAYSILFYLLQHGDAVAGLVGYRAALLFVFVAASESWYAVT
TRLYVWSPRAKLMRSWNDRFQRQVENQASAETMRVYKACPKTGVVGRYVG
FYLDGMFSGEEYLAVCVASADPFLNSPTCRLRSKATTDHFGQRIESSSKS
SFYSCTSLKFNLS
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