prot_H-elongata_contig74077.15099.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig74077.15099.1
Unique Nameprot_H-elongata_contig74077.15099.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length80
Homology
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BLAST of mRNA_H-elongata_contig74077.15099.1 vs. uniprot
Match: D8LSP7_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSP7_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 1.360e-18
Identity = 49/82 (59.76%), Postives = 61/82 (74.39%), Query Frame = 0 
Query:    3 QVYHSEATPNPYGGLPVRPEKLKLQFQDARSLQKKALSAIPNLVTMADLREDAS----SLREALAES-AEARYAAVLVTNSG 79
            +V+HSE+TPNPYGGLPVRPE++   FQDARSLQKK LSAIP+ V   DL + +S    SL+EALAE   E  +AA+L T +G
Sbjct:  126 KVHHSESTPNPYGGLPVRPEEMLTMFQDARSLQKKVLSAIPDSVVSVDLEKSSSGPSTSLKEALAEGDGEEAFAAILFTEAG 207
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig74077.15099.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSP7_ECTSI1.360e-1859.76Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 48..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig74077contigH-elongata_contig74077:492..1540 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig74077.15099.1mRNA_H-elongata_contig74077.15099.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig74077 492..1540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig74077.15099.1 ID=prot_H-elongata_contig74077.15099.1|Name=mRNA_H-elongata_contig74077.15099.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp
VVQVYHSEATPNPYGGLPVRPEKLKLQFQDARSLQKKALSAIPNLVTMAD
LREDASSLREALAESAEARYAAVLVTNSG*
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