prot_H-elongata_contig73946.15086.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73946.15086.1
Unique Nameprot_H-elongata_contig73946.15086.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length42
Homology
BLAST of mRNA_H-elongata_contig73946.15086.1 vs. uniprot
Match: D7FHG5_ECTSI (Ubiquitination factor E4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG5_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 9.470e-14
Identity = 33/41 (80.49%), Postives = 35/41 (85.37%), Query Frame = 0
Query:    1 MVELGWRPREVLGTLVDVYVKLSVCERFAEAVAADERSYKR 41
            M E+GWRPREVLGTLVDVY+ LS C  FAEAVA DERSYKR
Sbjct:  654 MAEIGWRPREVLGTLVDVYLSLSACPPFAEAVAGDERSYKR 694          
BLAST of mRNA_H-elongata_contig73946.15086.1 vs. uniprot
Match: A0A182HVD7_ANOAR (U-box domain-containing protein n=9 Tax=gambiae species complex TaxID=44542 RepID=A0A182HVD7_ANOAR)

HSP 1 Score: 51.2 bits (121), Expect = 2.780e-6
Identity = 22/37 (59.46%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    5 GWRPREVLGTLVDVYVKLSVCERFAEAVAADERSYKR 41
            GW PR +LG LVD+Y+ LS C+ FA A+AADERS+++
Sbjct: 1137 GWEPRRLLGQLVDIYLHLS-CDEFANALAADERSFEK 1172          
BLAST of mRNA_H-elongata_contig73946.15086.1 vs. uniprot
Match: UPI0018CEFE8A (ubiquitin conjugation factor E4 B n=1 Tax=Teleopsis dalmanni TaxID=139649 RepID=UPI0018CEFE8A)

HSP 1 Score: 51.2 bits (121), Expect = 2.780e-6
Identity = 20/40 (50.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    2 VELGWRPREVLGTLVDVYVKLSVCERFAEAVAADERSYKR 41
            ++ GW PR +LG + D+Y+ L  C+RFAE++AADERS+++
Sbjct: 1030 IKYGWEPRRLLGQIFDIYIHLH-CDRFAESLAADERSFQK 1068          
BLAST of mRNA_H-elongata_contig73946.15086.1 vs. uniprot
Match: UPI000C20B81E (ubiquitin conjugation factor E4 B n=1 Tax=Onthophagus taurus TaxID=166361 RepID=UPI000C20B81E)

HSP 1 Score: 51.2 bits (121), Expect = 2.780e-6
Identity = 22/37 (59.46%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    5 GWRPREVLGTLVDVYVKLSVCERFAEAVAADERSYKR 41
            GW PR +LG +VD+Y+ L  CE+FAEA+A DERS++R
Sbjct:  977 GWEPRWLLGHIVDIYLHLD-CEKFAEALAGDERSFRR 1012          
BLAST of mRNA_H-elongata_contig73946.15086.1 vs. uniprot
Match: Q7Q3H0_ANOGA (AGAP007870-PA (Fragment) n=4 Tax=Cellia TaxID=44534 RepID=Q7Q3H0_ANOGA)

HSP 1 Score: 51.2 bits (121), Expect = 2.780e-6
Identity = 22/37 (59.46%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    5 GWRPREVLGTLVDVYVKLSVCERFAEAVAADERSYKR 41
            GW PR +LG LVD+Y+ LS C+ FA A+AADERS+++
Sbjct:  921 GWEPRRLLGQLVDIYLHLS-CDEFANALAADERSFEK 956          
BLAST of mRNA_H-elongata_contig73946.15086.1 vs. uniprot
Match: A0A1I8QB10_STOCA (U-box domain-containing protein n=1 Tax=Stomoxys calcitrans TaxID=35570 RepID=A0A1I8QB10_STOCA)

HSP 1 Score: 50.8 bits (120), Expect = 3.810e-6
Identity = 20/40 (50.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    2 VELGWRPREVLGTLVDVYVKLSVCERFAEAVAADERSYKR 41
            ++ GW PR +LG + D+Y+ L  C+RFA+A+AADERS+++
Sbjct: 1072 IKYGWEPRRLLGQIFDIYLHLD-CDRFAQALAADERSFQK 1110          
BLAST of mRNA_H-elongata_contig73946.15086.1 vs. uniprot
Match: V5GJU6_ANOGL (Ubiquitin conjugation factor E4 B (Fragment) n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=V5GJU6_ANOGL)

HSP 1 Score: 48.9 bits (115), Expect = 5.570e-6
Identity = 20/37 (54.05%), Postives = 29/37 (78.38%), Query Frame = 0
Query:    5 GWRPREVLGTLVDVYVKLSVCERFAEAVAADERSYKR 41
            GW PR +L  LVD+Y+ L  C++FAEA+A DERS+++
Sbjct:   88 GWEPRRLLSQLVDIYLHLD-CDKFAEALAGDERSFRK 123          
BLAST of mRNA_H-elongata_contig73946.15086.1 vs. uniprot
Match: UPI0017829E06 (ubiquitin conjugation factor E4 B-like n=1 Tax=Rhagoletis pomonella TaxID=28610 RepID=UPI0017829E06)

HSP 1 Score: 49.7 bits (117), Expect = 6.780e-6
Identity = 20/37 (54.05%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    5 GWRPREVLGTLVDVYVKLSVCERFAEAVAADERSYKR 41
            GW PR +LG + D+Y+ L  C+RFA+A+AADERS+++
Sbjct:   37 GWEPRRLLGEIFDIYLHLD-CDRFAQALAADERSFQK 72          
BLAST of mRNA_H-elongata_contig73946.15086.1 vs. uniprot
Match: A0A1B0G1K1_GLOMM (U-box domain-containing protein n=7 Tax=Glossina TaxID=7393 RepID=A0A1B0G1K1_GLOMM)

HSP 1 Score: 50.1 bits (118), Expect = 7.130e-6
Identity = 20/37 (54.05%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    5 GWRPREVLGTLVDVYVKLSVCERFAEAVAADERSYKR 41
            GW PR +LG + D+Y++L  C+RFA+A+AADERS+++
Sbjct: 1063 GWDPRRLLGQIFDIYLRLD-CDRFAQALAADERSFQK 1098          
BLAST of mRNA_H-elongata_contig73946.15086.1 vs. uniprot
Match: UPI0008115430 (ubiquitin conjugation factor E4 B isoform X1 n=10 Tax=Rhagoletis TaxID=28609 RepID=UPI0008115430)

HSP 1 Score: 49.7 bits (117), Expect = 9.750e-6
Identity = 20/37 (54.05%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    5 GWRPREVLGTLVDVYVKLSVCERFAEAVAADERSYKR 41
            GW PR +LG + D+Y+ L  C+RFA+A+AADERS+++
Sbjct: 1134 GWEPRRLLGEIFDIYLHLD-CDRFAQALAADERSFQK 1169          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73946.15086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHG5_ECTSI9.470e-1480.49Ubiquitination factor E4 n=1 Tax=Ectocarpus silicu... [more]
A0A182HVD7_ANOAR2.780e-659.46U-box domain-containing protein n=9 Tax=gambiae sp... [more]
UPI0018CEFE8A2.780e-650.00ubiquitin conjugation factor E4 B n=1 Tax=Teleopsi... [more]
UPI000C20B81E2.780e-659.46ubiquitin conjugation factor E4 B n=1 Tax=Onthopha... [more]
Q7Q3H0_ANOGA2.780e-659.46AGAP007870-PA (Fragment) n=4 Tax=Cellia TaxID=4453... [more]
A0A1I8QB10_STOCA3.810e-650.00U-box domain-containing protein n=1 Tax=Stomoxys c... [more]
V5GJU6_ANOGL5.570e-654.05Ubiquitin conjugation factor E4 B (Fragment) n=1 T... [more]
UPI0017829E066.780e-654.05ubiquitin conjugation factor E4 B-like n=1 Tax=Rha... [more]
A0A1B0G1K1_GLOMM7.130e-654.05U-box domain-containing protein n=7 Tax=Glossina T... [more]
UPI00081154309.750e-654.05ubiquitin conjugation factor E4 B isoform X1 n=10 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019474Ubiquitin conjugation factor E4, corePFAMPF10408Ufd2P_corecoord: 3..40
e-value: 9.8E-11
score: 41.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73946contigH-elongata_contig73946:638..763 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73946.15086.1mRNA_H-elongata_contig73946.15086.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73946 626..763 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73946.15086.1 ID=prot_H-elongata_contig73946.15086.1|Name=mRNA_H-elongata_contig73946.15086.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=42bp
MVELGWRPREVLGTLVDVYVKLSVCERFAEAVAADERSYKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019474Ub_conjug_fac_E4_core