prot_H-elongata_contig73929.15083.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig73929.15083.1
Unique Name	prot_H-elongata_contig73929.15083.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	171

Homology

[Close]

BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: A0A6H5KHX7_9PHAE (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX7_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 1.830e-85
Identity = 129/170 (75.88%), Postives = 148/170 (87.06%), Query Frame = 0

Query:    1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTVKVK 170
            +GCLVAS               AALLKDGITRAPCLRMPDAMAAA LK+WS+ P+NFE+++AAFQTTT FGKLQG+ STVAGRNV+LRFNCFAGDAMGMNM+SKGVLAV++LLQ+ FPEM+LVAISGNMC+DKKSAAINW+EGRGKS+VCEARIP K+VEATLKTTVK +
Sbjct:   60 EGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSETPENFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQEEFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTVKAR 229

[Close]

BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: D7FUE1_ECTSI (Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE1_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 1.900e-81
Identity = 131/169 (77.51%), Postives = 147/169 (86.98%), Query Frame = 0

Query:    1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTVKV 169
            +GCLVAS               AALLKDGITRAPCLRMPDAMAAA LK+WS+ P NFE+++AAFQTTT FGKLQG+ STVAGRNV+LRFNCFAGDAMGMNM+SKGVLAV++LLQK FPEM+LVAISGNMC+DKKSAAINW+EGRGKS+VCEARIP K+VEATLKTTVKV
Sbjct:  325 EGCLVASTXXXXXXXXXXXXXXAALLKDGITRAPCLRMPDAMAAADLKKWSEMPDNFEAIKAAFQTTTRFGKLQGLMSTVAGRNVYLRFNCFAGDAMGMNMVSKGVLAVVDLLQKEFPEMELVAISGNMCTDKKSAAINWVEGRGKSIVCEARIPGKHVEATLKTTVKV 493

[Close]

BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: A0A835YX65_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX65_9STRA)

HSP 1 Score: 253 bits (646), Expect = 8.500e-79
Identity = 119/168 (70.83%), Postives = 144/168 (85.71%), Query Frame = 0

Query:    1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTVK 168
            +GCLVAS NRGCKAI+QGGG  + +LKDGITRAPCLRMPD + AA +K+W + P NF  V+AAF++TT+FG+L  VT  VAGRNV+LRF C AGDAMGMNM+SKG LA ++LL + FPE++L+AISGNMC+DKK AAINWIEGRGKSVVCEARIP +YVE+TLKTTV+
Sbjct:  249 EGCLVASTNRGCKAISQGGGARSVVLKDGITRAPCLRMPDTIGAARVKQWVEAPANFARVKAAFESTTSFGRLNAVTGAVAGRNVYLRFVCAAGDAMGMNMVSKGCLAAVDLLTEAFPELELIAISGNMCTDKKPAAINWIEGRGKSVVCEARIPGRYVESTLKTTVR 416

[Close]

BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: A0A7S1Y0Q7_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0Q7_9STRA)

HSP 1 Score: 233 bits (593), Expect = 4.060e-72
Identity = 114/168 (67.86%), Postives = 138/168 (82.14%), Query Frame = 0

Query:    1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTVK 168
            +GCLVAS NRGCKAIT  GG  A +LKDGITRAPC+ MP AMAAA LK W ++P+NF++++ AF +TT+FG+L+  T T+AGRNV+LR  CFAGDAMGMNM+SKG L V+ELL++ FPEM+LVAISGN+C DKK AAINWIEGRGKSVV EA I +  V  TLKTTV+
Sbjct:  125 EGCLVASTNRGCKAITACGGARARVLKDGITRAPCILMPSAMAAADLKAWVEEPENFQAIQNAFNSTTSFGRLKSCTPTIAGRNVYLRCVCFAGDAMGMNMVSKGCLKVIELLEEHFPEMELVAISGNVCCDKKPAAINWIEGRGKSVVVEATITADVVRKTLKTTVE 292

[Close]

BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: A0A7S2EB74_TRICV (3-hydroxy-3-methylglutaryl coenzyme A reductase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EB74_TRICV)

HSP 1 Score: 238 bits (606), Expect = 5.080e-72
Identity = 114/167 (68.26%), Postives = 138/167 (82.63%), Query Frame = 0

Query:    1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTV 167
            +GCLVAS NRGCKAI+QGGG  +A+++DGITRAPC+RM  AM AA LK W +DP NF  +++AF++TT+FGKL G   TVAGRNV+LR  CF+GDAMGMNM+SKG LAV+ELL+  FP ++LVA+SGNMC+DKK+AA NWIEGRGKSVV EA IP   V ATLKTTV
Sbjct:  346 EGCLVASANRGCKAISQGGGARSAVIRDGITRAPCVRMRSAMEAAELKLWCEDPANFARLKSAFESTTSFGKLLGAHPTVAGRNVYLRLRCFSGDAMGMNMVSKGSLAVIELLRSTFPSLELVALSGNMCTDKKAAATNWIEGRGKSVVVEATIPKDVVRATLKTTV 512

[Close]

BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: B7GE13_PHATC (3-hydroxy-3-methylglutaryl coenzyme A reductase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GE13_PHATC)

HSP 1 Score: 226 bits (576), Expect = 1.620e-70
Identity = 111/167 (66.47%), Postives = 133/167 (79.64%), Query Frame = 0

Query:    1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTV 167
            +GCLVAS NRG KAIT GGG  A LL+DGITRAPC+RMP A  AA LK W + PQ+F +++ AF++TT+FGKL     TVAGRNV+LR  CF+GDAMGMNM+SKG LAV+E LQ+ FPE+ LVA+SGNMC+DKK+AA NW+EGRGKS+V EA IP   V  TLKTTV
Sbjct:   53 EGCLVASTNRGAKAITAGGGATAVLLRDGITRAPCVRMPSAAQAAHLKLWCETPQHFSTLKRAFESTTSFGKLLKCAPTVAGRNVYLRLTCFSGDAMGMNMVSKGSLAVIETLQQEFPELVLVALSGNMCTDKKAAATNWLEGRGKSIVVEATIPKDVVTNTLKTTV 219

[Close]

BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: A0A1Z5KS57_FISSO (3-hydroxy-3-methylglutaryl coenzyme A reductase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS57_FISSO)

HSP 1 Score: 232 bits (591), Expect = 3.410e-70
Identity = 111/167 (66.47%), Postives = 137/167 (82.04%), Query Frame = 0

Query:    1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTV 167
            +GCLVAS NRG KAIT+GGG  A +++DGITRAPC+RMP AMAAA LK W + P+NF  ++AAF++TT+FGKL    +T+AG+NV+LR  CF+GDAMGMNM+SKG LAV+E L+K FPE+ LVA+SGNMC+DKK+AA NW+EGRGKSVV EA IP   V  TLKTTV
Sbjct:  274 EGCLVASTNRGAKAITEGGGALAQIVRDGITRAPCIRMPTAMAAAQLKLWCETPENFVQMKAAFESTTSFGKLHECKATIAGKNVYLRLVCFSGDAMGMNMVSKGTLAVIECLRKEFPELSLVALSGNMCTDKKAAATNWLEGRGKSVVVEATIPKDVVRKTLKTTV 440

[Close]

BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: A0A7S2JXU4_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JXU4_9STRA)

HSP 1 Score: 228 bits (580), Expect = 4.560e-69
Identity = 111/168 (66.07%), Postives = 133/168 (79.17%), Query Frame = 0

Query:    1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTVK 168
            +GCLVAS NRGCKAIT GGG  + LL+DGITRAPCLR   A  AAAL  W+ +P NF  ++AAF++TT+FGKL   T TVAG+N +LR  CF+GDAMGMNM+SKG LAV++LL++ FP ++LVA+SGNMC+DKK AAINWIEGRGKSVV EA IP   V   LKTTVK
Sbjct:  238 EGCLVASTNRGCKAITAGGGAVSTLLRDGITRAPCLRFESAAEAAALALWAQEPHNFAKLKAAFESTTSFGKLLSATPTVAGKNCYLRLKCFSGDAMGMNMVSKGSLAVVDLLRQHFPTLKLVALSGNMCTDKKPAAINWIEGRGKSVVVEATIPKDIVRTVLKTTVK 405

[Close]

BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: A0A7S1YA95_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YA95_9STRA)

HSP 1 Score: 230 bits (586), Expect = 4.680e-69
Identity = 112/167 (67.07%), Postives = 136/167 (81.44%), Query Frame = 0

Query:    1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTV 167
            +GCLVAS  RG KAITQGGG  A +LKDGITRAPC+RM  A  AA LK W + PQNF+ ++AAF++TT+FGKL     TVAGRNV+LR  CF+GDAMGMNM+SKG LAV++LL++ FP++QLVA+SGNMC+DKK+AA NW+EGRGKSVV EA IP   V +TLKTTV
Sbjct:  340 EGCLVASTQRGAKAITQGGGATAVVLKDGITRAPCVRMASAADAAKLKLWCEVPQNFQQLKAAFESTTSFGKLLSCNPTVAGRNVYLRLCCFSGDAMGMNMVSKGSLAVIDLLKRTFPQLQLVALSGNMCTDKKAAATNWLEGRGKSVVVEATIPQAVVRSTLKTTV 506

[Close]

BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Match: A0A7S2I1A6_9STRA (3-hydroxy-3-methylglutaryl coenzyme A reductase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I1A6_9STRA)

HSP 1 Score: 226 bits (576), Expect = 8.990e-69
Identity = 109/168 (64.88%), Postives = 136/168 (80.95%), Query Frame = 0

Query:    1 KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRWSDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMNMISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVCEARIPSKYVEATLKTTVK 168
            +GCLVAS NRGCKAITQG G  + +L+DGITRAPC+RM  A  AA LK W + P NF +++ AF++TT+FGKL  V  TVAG+NV+LR  CFAGDAMGMNM+SKG LAV++ L++VFP++ LVA+SGNMC+DKK+AA NWI GRGKSVV EA IP+  V +TLKTTV+
Sbjct:  206 EGCLVASTNRGCKAITQGSGATSVILRDGITRAPCVRMSSAKQAADLKLWCEQPNNFATLKQAFESTTSFGKLLTVEPTVAGKNVYLRLQCFAGDAMGMNMVSKGSLAVIDHLKQVFPDLDLVALSGNMCTDKKAAATNWIHGRGKSVVIEATIPNHIVRSTLKTTVQ 373

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot

BLAST of mRNA_H-elongata_contig73929.15083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KHX7_9PHAE	1.830e-85	75.88	Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Ta...	[more]
D7FUE1_ECTSI	1.900e-81	77.51	Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Ta...	[more]
A0A835YX65_9STRA	8.500e-79	70.83	3-hydroxy-3-methylglutaryl coenzyme A reductase n=...	[more]
A0A7S1Y0Q7_9STRA	4.060e-72	67.86	3-hydroxy-3-methylglutaryl coenzyme A reductase n=...	[more]
A0A7S2EB74_TRICV	5.080e-72	68.26	3-hydroxy-3-methylglutaryl coenzyme A reductase (F...	[more]
B7GE13_PHATC	1.620e-70	66.47	3-hydroxy-3-methylglutaryl coenzyme A reductase (F...	[more]
A0A1Z5KS57_FISSO	3.410e-70	66.47	3-hydroxy-3-methylglutaryl coenzyme A reductase n=...	[more]
A0A7S2JXU4_9STRA	4.560e-69	66.07	3-hydroxy-3-methylglutaryl coenzyme A reductase n=...	[more]
A0A7S1YA95_9STRA	4.680e-69	67.07	3-hydroxy-3-methylglutaryl coenzyme A reductase n=...	[more]
A0A7S2I1A6_9STRA	8.990e-69	64.88	3-hydroxy-3-methylglutaryl coenzyme A reductase n=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002202	Hydroxymethylglutaryl-CoA reductase, class I/II	PRINTS	PR00071	HMGCOARDTASE	coord: 4..24 score: 22.02 coord: 126..151 score: 82.85
IPR002202	Hydroxymethylglutaryl-CoA reductase, class I/II	PFAM	PF00368	HMG-CoA_red	coord: 2..168 e-value: 6.5E-53 score: 180.0
IPR002202	Hydroxymethylglutaryl-CoA reductase, class I/II	PANTHER	PTHR10572	3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE	coord: 2..168
IPR002202	Hydroxymethylglutaryl-CoA reductase, class I/II	PROSITE	PS50065	HMG_COA_REDUCTASE_4	coord: 1..170 score: 47.309
IPR009023	Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily	GENE3D	3.30.70.420		coord: 29..145 e-value: 3.6E-47 score: 161.4
IPR009023	Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily	SUPERFAMILY	55035	NAD-binding domain of HMG-CoA reductase	coord: 29..145
None	No IPR available	PANTHER	PTHR10572:SF2	3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE	coord: 2..168
IPR023076	Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site	PROSITE	PS00066	HMG_COA_REDUCTASE_1	coord: 88..102
IPR009029	Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily	SUPERFAMILY	56542	Substrate-binding domain of HMG-CoA reductase	coord: 2..167

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig73929	contig	H-elongata_contig73929:1441..2756 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig73929.15083.1	mRNA_H-elongata_contig73929.15083.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig73929 1441..2756 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig73929.15083.1 ID=prot_H-elongata_contig73929.15083.1|Name=mRNA_H-elongata_contig73929.15083.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=171bp
KGCLVASINRGCKAITQGGGCHAALLKDGITRAPCLRMPDAMAAAALKRW
SDDPQNFESVRAAFQTTTNFGKLQGVTSTVAGRNVFLRFNCFAGDAMGMN
MISKGVLAVMELLQKVFPEMQLVAISGNMCSDKKSAAINWIEGRGKSVVC
EARIPSKYVEATLKTTVKVK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002202	HMG_CoA_Rdtase
IPR009023	HMG_CoA_Rdtase_NAD(P)-bd_sf
IPR023076	HMG_CoA_Rdtase_CS
IPR009029	HMG_CoA_Rdtase_sub-bd_dom_sf