prot_H-elongata_contig73812.15076.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73812.15076.1
Unique Nameprot_H-elongata_contig73812.15076.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length207
Homology
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BLAST of mRNA_H-elongata_contig73812.15076.1 vs. uniprot
Match: D7FZF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF6_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 1.530e-37
Identity = 91/157 (57.96%), Postives = 108/157 (68.79%), Query Frame = 0 
Query:   76 RGTGVTMPELELFDLVAGGAFERALEDMG-------GVWSYLPLFLQMLRDGNSRSGAEAGDRFDKLLR----VVVQNRRADSTEDYLNVAKECCALLRKVLAPSSSSNTSK--------------SSKSSSRADLRAVSPVPGLGTVGGGSGMGPA 207
            RG G  MP+L+LFDLVAGGAFERALE MG       GVWSYLPLFLQMLRDG+++SGAE GDRFDKLLR    VVVQNRRADSTEDYLN+A++CC  LRK   P++++ +S+              S+ SS   D R+ SPVP  G  G G+  GPA
Sbjct:   47 RGRG--MPKLQLFDLVAGGAFERALEGMGRQEGGEEGVWSYLPLFLQMLRDGSTKSGAEVGDRFDKLLRELVRVVVQNRRADSTEDYLNIARDCCTHLRKGPTPTTTTASSRMASRLATSSPQPLHSAPSSKTTDSRSASPVP-AGGGGEGAQQGPA 200
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73812.15076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZF6_ECTSI1.530e-3757.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73812contigH-elongata_contig73812:547..2379 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73812.15076.1mRNA_H-elongata_contig73812.15076.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73812 547..2379 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73812.15076.1 ID=prot_H-elongata_contig73812.15076.1|Name=mRNA_H-elongata_contig73812.15076.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=207bp
AHLAISEAGDVRRKFVSSYTLKRAMDPMDEGHEDRTALRRLSRENLARAK
QSADKKRPTNPVMIAAEGAKSSCLIRGTGVTMPELELFDLVAGGAFERAL
EDMGGVWSYLPLFLQMLRDGNSRSGAEAGDRFDKLLRVVVQNRRADSTED
YLNVAKECCALLRKVLAPSSSSNTSKSSKSSSRADLRAVSPVPGLGTVGG
GSGMGPA
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