prot_H-elongata_contig7379.15072.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7379.15072.1
Unique Nameprot_H-elongata_contig7379.15072.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length386
Homology
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BLAST of mRNA_H-elongata_contig7379.15072.1 vs. uniprot
Match: D8LMJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ2_ECTSI)

HSP 1 Score: 389 bits (999), Expect = 8.670e-120
Identity = 207/359 (57.66%), Postives = 256/359 (71.31%), Query Frame = 0 
Query:   44 YEVVDLLQCIATPNKGFTSDLYHGGRGDGG------------GRNREGEEILRNEMNSPSEKEKAETVRTFALWILAHYTGRADDRVNVANHGGFKVLTCILMEPGGLMETVN----TTGKSISRQTFVSLKLAAKTLANLCQVPQNAEFVQSVGVLAVIEALYSFAGGWFFSFRPATFLCGPAMGSGFHYAQESCVPPRYKINPDYKKSYLVVQETLWRPIVKVPIEHNDGTVTVFYEVPAGNNECLELSKRVTPKEIEGKEFQVLLGEVPHQINILDEVATCLKSLAMHSYVLKLFVSSGVLGPFLQLSLRGLIPRETCLSALLDIAVKSYSQHPDVMRHLWSMITSTVLDPEEEFP 386
            +EVVDLLQCIATP++ + SD   G  G+GG            GR+  G+E         SE+ +A+TVRTFALWILAHYTGR+DDRV+VA+HGG  VLT ILM P GL+E       + GK  S+Q+F++LKLAAK LANLCQ PQNAE V+  G LA I+ALY++           +    P+  S +  AQ +C+P RYKI+PD++K+YLV+QE LWRP+VK P+ H DG++TV YEVPAGNNEC ELSK++TP  +E KE Q+  GEVPHQIN+  EVA CL +LAMHS VLKLF  SGVLGPFL+LSL  L+PRETCL+ALLD  VK+YSQH  VMRHLWS+ITSTVLD E + P
Sbjct:  524 FEVVDLLQCIATPSERYASD---GSGGEGGHGYDTAVASEHSGRSFGGQE----RAVDASEQMRADTVRTFALWILAHYTGRSDDRVHVASHGGLTVLTSILMGPTGLVEAAKAGGASGGKPASKQSFINLKLAAKALANLCQAPQNAELVEPAGALAAIKALYAYISDNNDIVGNTSASTQPSTSSAYGRAQMNCIPARYKIDPDFRKAYLVIQENLWRPVVKDPVVHEDGSLTVHYEVPAGNNECFELSKKLTPLMVERKELQICQGEVPHQINVFAEVAACLSALAMHSSVLKLFAPSGVLGPFLELSLEQLVPRETCLTALLDTPVKAYSQHAQVMRHLWSLITSTVLDSETDAP 875
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7379.15072.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMJ2_ECTSI8.670e-12057.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 94..369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7379contigH-elongata_contig7379:6348..10069 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7379.15072.1mRNA_H-elongata_contig7379.15072.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7379 753..10069 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7379.15072.1 ID=prot_H-elongata_contig7379.15072.1|Name=mRNA_H-elongata_contig7379.15072.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=386bp
MIRVDLCHGASVERLAAYISELDVLGASAGVLYENVPRACLKHYEVVDLL
QCIATPNKGFTSDLYHGGRGDGGGRNREGEEILRNEMNSPSEKEKAETVR
TFALWILAHYTGRADDRVNVANHGGFKVLTCILMEPGGLMETVNTTGKSI
SRQTFVSLKLAAKTLANLCQVPQNAEFVQSVGVLAVIEALYSFAGGWFFS
FRPATFLCGPAMGSGFHYAQESCVPPRYKINPDYKKSYLVVQETLWRPIV
KVPIEHNDGTVTVFYEVPAGNNECLELSKRVTPKEIEGKEFQVLLGEVPH
QINILDEVATCLKSLAMHSYVLKLFVSSGVLGPFLQLSLRGLIPRETCLS
ALLDIAVKSYSQHPDVMRHLWSMITSTVLDPEEEFP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold