prot_H-elongata_contig73687.15061.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73687.15061.1
Unique Nameprot_H-elongata_contig73687.15061.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length205
Homology
BLAST of mRNA_H-elongata_contig73687.15061.1 vs. uniprot
Match: D7G1M3_ECTSI (SpoU_methylase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1M3_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 2.320e-79
Identity = 141/210 (67.14%), Postives = 158/210 (75.24%), Query Frame = 0
Query:    1 RSADTARAAEVITCGYTPHPGGHGEDKVRKTAFGSIDAVAHRHFEDPVDAVLSLRAAGAFVCALETTEGASSLFDVVFPLPSTPAG-----SSTRSDTSDGGAGRSVDPGVSVERRASEAQGDKP-------LSGGTEA-FELTRGGVVALVLGNEVTGVDERVLGRCDLVVELPVFGLKNSLNVASAGTVALYEILRQWAEAGRLAGAG 197
            RSADTAR AEVITCG+TPHPGGHGE+KVRKT FGS+DAVAHRHFEDP +AV SL+AAGAFVCALETT+ ASSLFDV FPLP    G     +++  D    G G  V    + E   +EA+  K        L GG+    EL  GGVVALVLGNEVTGVDERVLG CDLVVE+PVFGLKNSLNVASAGTV LYE+LRQW+ AGRLAG+G
Sbjct:  359 RSADTARVAEVITCGFTPHPGGHGEEKVRKTGFGSVDAVAHRHFEDPSEAVRSLKAAGAFVCALETTDNASSLFDVRFPLPPALEGKARPKNASAVDAGTAGGGDVVRGSFAAEDSENEARAPKTDGRAVERLDGGSRGGLELEEGGVVALVLGNEVTGVDERVLGLCDLVVEVPVFGLKNSLNVASAGTVVLYEVLRQWSVAGRLAGSG 568          
BLAST of mRNA_H-elongata_contig73687.15061.1 vs. uniprot
Match: A0A836CKA2_9STRA (SpoU_methylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKA2_9STRA)

HSP 1 Score: 135 bits (339), Expect = 5.030e-33
Identity = 91/204 (44.61%), Postives = 108/204 (52.94%), Query Frame = 0
Query:    1 RSADTARAAEVITCGYTPHPGGHGEDKVRKTAFGSIDAVAHRHFEDPVDAVLSLRAAGAFVCALETTEGASSLFDV-VFPLPSTPAGSSTRSDTSDGGAGRSVDPGVSVERR-------------ASEAQGDKPLSGGTEAFELTRGGVVALVLGNEVTGVDERVLGRCDLVVELPVFGLKNSLNVASAGTVALYEILRQWAEA 190
            RSADTA AAE++TCG TPHP G GEDK+RKTAF S+D V  RHF     AV +LRA G  V A+ETT  A+++F   +FP                      V   V V +R                        G + A+       +A VLG+EVTGVD  VL  CD VVELPV+G+KNSLNV SA T ALYE LRQ   A
Sbjct:  393 RSADTASAAEIVTCGLTPHPSGPGEDKLRKTAFSSLDTVPSRHFNSTAGAVRALRAEGYRVLAMETTSDATNMFTTDLFPAH--------------------VVVEVVVAKRHYXXXXXXXXXXXXXXXXXXXXXXGDSGAYRP-----LAFVLGHEVTGVDVSVLRECDGVVELPVYGIKNSLNVCSAATAALYEALRQLKAA 571          
BLAST of mRNA_H-elongata_contig73687.15061.1 vs. uniprot
Match: A0A2E6CDK8_9BACT (RNA methyltransferase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2E6CDK8_9BACT)

HSP 1 Score: 103 bits (256), Expect = 5.640e-24
Identity = 68/191 (35.60%), Postives = 86/191 (45.03%), Query Frame = 0
Query:    1 RSADTARAAEVITCGYTPHPGGHGEDKVRKTAFGSIDAVAHRHFEDPVDAVLSLRAAGAFVCALETTEGASSLFDVVFPLPSTPAGSSTRSDTSDGGAGRSVDPGVSVERRASEAQGDKPLSGGTEAFELTRGGVVALVLGNEVTGVDERVLGRCDLVVELPVFGLKNSLNVASAGTVALYEILRQWAEAG 191
            R+AD AR AEV+TCGYT HP      K+ KTA G++D V  RHFE    A+  LR  G  V ALETT  +    +V +P P                                                      +A VLGNE  GV+     RCD ++E+P++G KNSL VA A  VA +E+LRQW   G
Sbjct:   54 RTADAARIAEVLTCGYTAHP---PHKKLDKTALGTLDFVPTRHFETSSHALDYLRDEGXAVWALETTSHSVCYTEVDYPQP------------------------------------------------------LAXVLGNEALGVERATXERCDQMLEIPMYGYKNSLXVAGAAAVACFEVLRQWRTCG 187          
BLAST of mRNA_H-elongata_contig73687.15061.1 vs. uniprot
Match: R1ED08_EMIHU (SpoU_methylase domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ED08_EMIHU)

HSP 1 Score: 87.8 bits (216), Expect = 5.450e-17
Identity = 66/181 (36.46%), Postives = 80/181 (44.20%), Query Frame = 0
Query:    1 RSADTARAAEVITCGYTPHPGGHGEDKVRKTAFGSIDAVAHRHFEDPVDAVLSLRAAGAFVCALETTEGASSLFDVVFPLPSTPAGSSTRSDTSDGGAGRSVDPGVSVERRASEAQGDKPLSGGTEAFELTRGGVVALVLGNEVTGVDERVLGRCDLVVELPVFGLKNSLNVASAGTVALY 181
            R+ADTAR AEVITCG+TPHP      K+ KTAFG+I++            V         V A+ETTE + +   V FP    P G                                                 VALVLGNE  GVD  VL   D +VE+P FG+KNSLNVASA TV ++
Sbjct:  242 RTADTARCAEVITCGFTPHP---PNPKLAKTAFGAIESAVRXXXXXXXXXVA--------VYAMETTERSQAYSTVAFP----PGG-------------------------------------------------VALVLGNEQIGVDTDVLAAVDGIVEIPTFGVKNSLNVASAATVVVF 358          
BLAST of mRNA_H-elongata_contig73687.15061.1 vs. uniprot
Match: R1CTC7_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CTC7_EMIHU)

HSP 1 Score: 82.4 bits (202), Expect = 3.540e-15
Identity = 37/54 (68.52%), Postives = 46/54 (85.19%), Query Frame = 0
Query:  136 VALVLGNEVTGVDERVLGRCDLVVELPVFGLKNSLNVASAGTVALYEILRQWAE 189
            VA+VLGNEVTGVD+ V+  CD VVE+PVFG+KNSLNVA   +VALYE+LR+W +
Sbjct:  263 VAIVLGNEVTGVDKAVMEECDAVVEIPVFGVKNSLNVACCASVALYEVLRRWGK 316          
BLAST of mRNA_H-elongata_contig73687.15061.1 vs. uniprot
Match: A0A7S2YLJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YLJ2_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.570e-14
Identity = 36/60 (60.00%), Postives = 47/60 (78.33%), Query Frame = 0
Query:  128 FELTRGGVVALVLGNEVTGVDERVLGRCDLVVELPVFGLKNSLNVASAGTVALYEILRQW 187
            ++ ++G  VALVLGNEVTGV   VL + D++VE+P +G+KNSLNVAS   + LYEILRQW
Sbjct:   54 YDASKG--VALVLGNEVTGVTASVLPQMDMIVEIPTYGVKNSLNVASCAPIVLYEILRQW 111          
BLAST of mRNA_H-elongata_contig73687.15061.1 vs. uniprot
Match: A0A7S2E2W0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E2W0_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 5.450e-14
Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0
Query:  137 ALVLGNEVTGVDERVLGRCDLVVELPVFGLKNSLNVASAGTVALYEILRQW 187
            AL+LGNEVTGVD  VL  CD +VE+P  GLKNSLNVASA +V ++E+LRQW
Sbjct:  210 ALILGNEVTGVDTAVLEECDFIVEIPTLGLKNSLNVASASSVIVFEVLRQW 260          
BLAST of mRNA_H-elongata_contig73687.15061.1 vs. uniprot
Match: A0A7S1BMN9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BMN9_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 7.160e-14
Identity = 45/86 (52.33%), Postives = 53/86 (61.63%), Query Frame = 0
Query:  102 VDPGVSVERRASEAQGDKPLSGGTEAFELTRGGVVALVLGNEVTGVDERVLGRCDLVVELPVFGLKNSLNVASAGTVALYEILRQW 187
             D  V   R   EA+G +  S     + L  G   ALVLGNEVTGVD  V+   D +VE+P+FG KNSLNVA+A  V LYEILRQW
Sbjct:  139 TDRSVCYSREVGEAEGTESPSFRGPLY-LKEGKGTALVLGNEVTGVDTEVMDALDGLVEVPMFGTKNSLNVAAAAPVVLYEILRQW 223          
BLAST of mRNA_H-elongata_contig73687.15061.1 vs. uniprot
Match: A0A382QX96_9ZZZZ (SpoU_methylase domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382QX96_9ZZZZ)

HSP 1 Score: 75.5 bits (184), Expect = 9.040e-14
Identity = 39/70 (55.71%), Postives = 45/70 (64.29%), Query Frame = 0
Query:  129 ELTRGGVVALVLGNEVTGVDERVLGRCDLVVELPVFGLKNSLNVASAGTVALYEILRQWAEAGRLAGAGP 198
            E+T    VALVLGNE  GV+  VL RCD ++E+PVFG KNSLNVA    V +YEILRQW       G  P
Sbjct:   86 EVTYPRPVALVLGNEALGVERDVLDRCDELLEVPVFGYKNSLNVACTAAVVVYEILRQWGYQPSPTGPPP 155          
BLAST of mRNA_H-elongata_contig73687.15061.1 vs. uniprot
Match: A0A0M0JXU3_9EUKA (tRNA rRNA methyltransferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JXU3_9EUKA)

HSP 1 Score: 76.6 bits (187), Expect = 1.320e-13
Identity = 39/69 (56.52%), Postives = 46/69 (66.67%), Query Frame = 0
Query:  136 VALVLGNEVTGVDERVLGRCDLVVELPVFGLKNSLNVASAGTVALYEILRQWAEAGRLAGAGPKIDLDP 204
            VALVLGNEV+GVD  VL  CD V+ +PVFG+KNSLNVA    +ALYE+LR+W       G  P  D  P
Sbjct:  159 VALVLGNEVSGVDAAVLAVCDAVLVVPVFGVKNSLNVACCAAIALYEVLRRW-------GKYPSADAAP 220          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73687.15061.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1M3_ECTSI2.320e-7967.14SpoU_methylase domain-containing protein n=1 Tax=E... [more]
A0A836CKA2_9STRA5.030e-3344.61SpoU_methylase domain-containing protein n=1 Tax=T... [more]
A0A2E6CDK8_9BACT5.640e-2435.60RNA methyltransferase n=1 Tax=Gemmatimonadetes bac... [more]
R1ED08_EMIHU5.450e-1736.46SpoU_methylase domain-containing protein n=2 Tax=E... [more]
R1CTC7_EMIHU3.540e-1568.52Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S2YLJ2_9STRA1.570e-1460.00Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S2E2W0_9STRA5.450e-1468.63Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1BMN9_9STRA7.160e-1452.33Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A382QX96_9ZZZZ9.040e-1455.71SpoU_methylase domain-containing protein n=1 Tax=m... [more]
A0A0M0JXU3_9EUKA1.320e-1356.52tRNA rRNA methyltransferase n=1 Tax=Chrysochromuli... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029026tRNA (guanine-N1-)-methyltransferase, N-terminalGENE3D3.40.1280.10coord: 112..196
e-value: 7.9E-17
score: 63.2
coord: 1..83
e-value: 4.2E-6
score: 28.2
IPR001537tRNA/rRNA methyltransferase, SpoU typePFAMPF00588SpoU_methylasecoord: 126..181
e-value: 3.8E-11
score: 43.3
NoneNo IPR availablePANTHERPTHR43191:SF7OBP33PEP LIKE PROTEINcoord: 1..182
NoneNo IPR availablePANTHERPTHR43191FAMILY NOT NAMEDcoord: 1..182
IPR029028Alpha/beta knot methyltransferasesSUPERFAMILY75217alpha/beta knotcoord: 1..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73687contigH-elongata_contig73687:97..1649 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73687.15061.1mRNA_H-elongata_contig73687.15061.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73687 97..1649 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73687.15061.1 ID=prot_H-elongata_contig73687.15061.1|Name=mRNA_H-elongata_contig73687.15061.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=205bp
RSADTARAAEVITCGYTPHPGGHGEDKVRKTAFGSIDAVAHRHFEDPVDA
VLSLRAAGAFVCALETTEGASSLFDVVFPLPSTPAGSSTRSDTSDGGAGR
SVDPGVSVERRASEAQGDKPLSGGTEAFELTRGGVVALVLGNEVTGVDER
VLGRCDLVVELPVFGLKNSLNVASAGTVALYEILRQWAEAGRLAGAGPKI
DLDP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029026tRNA_m1G_MTases_N
IPR001537SpoU_MeTrfase
IPR029028Alpha/beta_knot_MTases