prot_H-elongata_contig7367.15059.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7367.15059.1
Unique Nameprot_H-elongata_contig7367.15059.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length280
Homology
BLAST of mRNA_H-elongata_contig7367.15059.1 vs. uniprot
Match: A0A6H5L995_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L995_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 1.430e-85
Identity = 148/213 (69.48%), Postives = 169/213 (79.34%), Query Frame = 0
Query:   76 SASSSRKSFIERGALATIGGFA-IASTAPVVSEAAQFGGVEVRGIDVAEV--------LHPGAGGTG-KASKPLRDCLLNVERVRISTKQLEDTLTNEGPPPGLTGLVKGLVKNYKLDESLRQGALYIESQGDRNAAASAGREALEYLAQTIEYFPVELDERTGAPKRPSVEALEFTINALGATRGKLDLYLSKIPSDALREARAEIKAEGGD 278
            S SSSR+ F+E GA+A +   A I    P V+          +GID++EV        +H GAG +G KA+KPLRDCLLNVERVRISTKQLEDTLTN+G PPGLTGLVKGL+KNYKLDESL+QGA YIES GDRN AASAGREALEYLAQT EYFPVE+D+RTGAPK+ S EALEFT+NAL ATR KLDL+LSK+PSDAL EARAEIK+EGGD
Sbjct:   58 SISSSRRGFLEGGAVALLASVAAIGLPEPSVA----------KGIDLSEVXXXXXXXXMHLGAGSSGGKATKPLRDCLLNVERVRISTKQLEDTLTNDGAPPGLTGLVKGLIKNYKLDESLQQGAKYIESSGDRNTAASAGREALEYLAQTAEYFPVEVDDRTGAPKKLSSEALEFTVNALIATRAKLDLFLSKVPSDALAEARAEIKSEGGD 260          
BLAST of mRNA_H-elongata_contig7367.15059.1 vs. uniprot
Match: A0A7S2XY69_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY69_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.120e-21
Identity = 57/153 (37.25%), Postives = 87/153 (56.86%), Query Frame = 0
Query:  131 GTGKASKPLRDCLLNVERVRISTKQLEDTLTNEGPPPGLTGLVKGLVKNYKLDESLRQGALYIESQGDRNAAASAGREALEYLAQTIEYFPVELDERTGAPKRPSV----EALEFTINALGATRGKLDLYLSKIPSDALREARAEIKAEGGDS 279
            G  K +KPL +CL +V  V+++TKQLED +TN      +    + L++NYKL+E+LRQG  Y+ES  +R  A    +EALE L    EYFP   D  TG     S+    E ++F++ AL +T   L+ YLS +P + + + +  I  +  +S
Sbjct:  115 GKKKPTKPLEECLESVALVQLTTKQLEDDITNGQEIGDIPAQAQLLLRNYKLEENLRQGVQYLESNAERVEATKYAKEALEDLILITEYFPESYDNFTGKRLPSSLTLTPEKIKFSVKALSSTTKALEGYLSTMPVEMVAKVKQSIAEDMAES 267          
BLAST of mRNA_H-elongata_contig7367.15059.1 vs. uniprot
Match: A0A7S3TS97_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TS97_9SPIT)

HSP 1 Score: 54.7 bits (130), Expect = 4.340e-5
Identity = 38/146 (26.03%), Postives = 72/146 (49.32%), Query Frame = 0
Query:  134 KASKPLRDCLLNVERVRISTKQLEDTLTN----EGPPPGLTGLVKGLVKNYKLDESLRQGALYIESQGDRNAAASAGREALEYLAQTIEYFPVELDERTGAPKRPSVEALEFTINALGATRGKLDLYLSKIPSDALREARAEIKAE 275
            K+   L++ L  + RV+ +T Q E  ++     +     +   +  ++ NYKL + +   + Y     +   A+ AG+EA++ L    EYF  EL        + S     F ++A+ ATR KLD +L  +P++ ++ AR +++ E
Sbjct:   98 KSVNELQEALYLISRVQEATVQQERLVSTGKFKDMQRNSIKMALNMMLNNYKLGDQIVVASAYASPADNVFKASQAGKEAIDVLETAQEYFAKELKVSGLTDTQRS-----FIVDAMTATRTKLDNFLKFMPAETVQAARKQVEDE 238          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7367.15059.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L995_9PHAE1.430e-8569.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XY69_9STRA1.120e-2137.25Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3TS97_9SPIT4.340e-526.03Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..279
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.824

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7367contigH-elongata_contig7367:2254..6461 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7367.15059.1mRNA_H-elongata_contig7367.15059.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7367 1978..6643 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7367.15059.1 ID=prot_H-elongata_contig7367.15059.1|Name=mRNA_H-elongata_contig7367.15059.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=280bp
MYPTRFGRCTLALLIALTLSSASAFFAPRTSSSMVAQRLWQRGGSRNHQF
MKAIEHDTNNKAFDALATIRASSAASASSSRKSFIERGALATIGGFAIAS
TAPVVSEAAQFGGVEVRGIDVAEVLHPGAGGTGKASKPLRDCLLNVERVR
ISTKQLEDTLTNEGPPPGLTGLVKGLVKNYKLDESLRQGALYIESQGDRN
AAASAGREALEYLAQTIEYFPVELDERTGAPKRPSVEALEFTINALGATR
GKLDLYLSKIPSDALREARAEIKAEGGDS*
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