prot_H-elongata_contig73528.15043.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73528.15043.1
Unique Nameprot_H-elongata_contig73528.15043.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length92
Homology
BLAST of mRNA_H-elongata_contig73528.15043.1 vs. uniprot
Match: D8LTQ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTQ5_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 7.070e-57
Identity = 86/92 (93.48%), Postives = 91/92 (98.91%), Query Frame = 0
Query:    1 QGSRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGMFVKFQPQSLDFLDMSNPRAVLETTMRHFSCLTEGDVICIPYNDR 92
            QG+RTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKG FVKFQPQS+DFL++SNPRAVLETTMRHFSCLTEGDVIC+PYNDR
Sbjct:   79 QGNRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGTFVKFQPQSVDFLEISNPRAVLETTMRHFSCLTEGDVICLPYNDR 170          
BLAST of mRNA_H-elongata_contig73528.15043.1 vs. uniprot
Match: A0A836CM39_9STRA (Ubiquitin fusion degradation protein UFD1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM39_9STRA)

HSP 1 Score: 156 bits (394), Expect = 8.190e-45
Identity = 70/92 (76.09%), Postives = 79/92 (85.87%), Query Frame = 0
Query:    1 QGSRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGMFVKFQPQSLDFLDMSNPRAVLETTMRHFSCLTEGDVICIPYNDR 92
            +G  THCGVLEFSAPEGSCYIP WMM NLLLE G L+T+KNVSLPK  FVK QPQS+DFLD+SNPRAVLE  +RHFSC+T+GD +CIPYN R
Sbjct:   79 EGKTTHCGVLEFSAPEGSCYIPFWMMSNLLLEPGGLITIKNVSLPKANFVKLQPQSVDFLDISNPRAVLERQLRHFSCVTKGDQLCIPYNAR 170          
BLAST of mRNA_H-elongata_contig73528.15043.1 vs. uniprot
Match: A0A6V1UUZ4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UUZ4_HETAK)

HSP 1 Score: 151 bits (381), Expect = 7.330e-43
Identity = 65/91 (71.43%), Postives = 80/91 (87.91%), Query Frame = 0
Query:    2 GSRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGMFVKFQPQSLDFLDMSNPRAVLETTMRHFSCLTEGDVICIPYNDR 92
            G +THCGVLEFSAPEGSCY+P WMMQNLLLE G ++ +KNVSLPK  F K +PQS+DFLD+SNPRAVLE T+R +SC+T+GDV+CIPYN++
Sbjct:   68 GKKTHCGVLEFSAPEGSCYMPFWMMQNLLLEEGGMIKIKNVSLPKATFCKLKPQSVDFLDISNPRAVLEHTLRGYSCVTKGDVVCIPYNEK 158          
BLAST of mRNA_H-elongata_contig73528.15043.1 vs. uniprot
Match: F0Y6V8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6V8_AURAN)

HSP 1 Score: 150 bits (378), Expect = 1.210e-42
Identity = 67/89 (75.28%), Postives = 77/89 (86.52%), Query Frame = 0
Query:    4 RTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGMFVKFQPQSLDFLDMSNPRAVLETTMRHFSCLTEGDVICIPYNDR 92
            RTHCGVLEF+APEG+CY+P WMMQNL+LE G +L+VKNVSLPK  FVKF+PQS DFLD+SNPRAVLE   R FSCLT GD IC+PYND+
Sbjct:   63 RTHCGVLEFTAPEGNCYVPFWMMQNLMLEEGGVLSVKNVSLPKATFVKFKPQSTDFLDISNPRAVLEKQFRTFSCLTVGDQICLPYNDK 151          
BLAST of mRNA_H-elongata_contig73528.15043.1 vs. uniprot
Match: A0A7S2V4N8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4N8_9STRA)

HSP 1 Score: 149 bits (376), Expect = 3.410e-42
Identity = 65/91 (71.43%), Postives = 78/91 (85.71%), Query Frame = 0
Query:    2 GSRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGMFVKFQPQSLDFLDMSNPRAVLETTMRHFSCLTEGDVICIPYNDR 92
            G RTHCGVLEFSAPEGS YIP WMMQNL+LE G ++ +KNVSLPK  +VKF+PQS+DFLD++NPRAVLE  +R FSC+T+GD ICIPYN +
Sbjct:   76 GKRTHCGVLEFSAPEGSAYIPFWMMQNLMLEEGGMVLIKNVSLPKASYVKFKPQSMDFLDITNPRAVLERALRSFSCVTKGDTICIPYNSK 166          
BLAST of mRNA_H-elongata_contig73528.15043.1 vs. uniprot
Match: B8BWC2_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWC2_THAPS)

HSP 1 Score: 143 bits (361), Expect = 9.640e-42
Identity = 64/92 (69.57%), Postives = 79/92 (85.87%), Query Frame = 0
Query:    1 QGSRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGMFVKFQPQSLDFLDMSNPRAVLETTMRHFSCLTEGDVICIPYNDR 92
            +G+ THCGVLEF+A EGSC IP WMMQNLL+E G++LTV NVSLPK  FVKFQ Q +DFL++SNPRAVLE  +R+FSC+T+GDVIC+PYN +
Sbjct:   52 KGTLTHCGVLEFTAEEGSCVIPFWMMQNLLIEEGAVLTVTNVSLPKANFVKFQAQHVDFLEISNPRAVLEHALRNFSCITKGDVICVPYNSK 143          
BLAST of mRNA_H-elongata_contig73528.15043.1 vs. uniprot
Match: A0A4D9D4Y4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Y4_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.550e-41
Identity = 67/91 (73.63%), Postives = 78/91 (85.71%), Query Frame = 0
Query:    2 GSRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGMFVKFQPQSLDFLDMSNPRAVLETTMRHFSCLTEGDVICIPYNDR 92
            G RTHCGVLEFSA EGSCY+P+WMMQNLLLE G  L VKNVSLPK  FVKF+PQS+DFL+++NPRAVLE  +R FSC+T GD ICIP+ND+
Sbjct:   81 GKRTHCGVLEFSAAEGSCYLPYWMMQNLLLEEGGFLQVKNVSLPKATFVKFRPQSVDFLEITNPRAVLERALRSFSCVTVGDHICIPHNDK 171          
BLAST of mRNA_H-elongata_contig73528.15043.1 vs. uniprot
Match: A0A7S3K3U4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3U4_9STRA)

HSP 1 Score: 146 bits (368), Expect = 3.880e-41
Identity = 64/92 (69.57%), Postives = 79/92 (85.87%), Query Frame = 0
Query:    1 QGSRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGMFVKFQPQSLDFLDMSNPRAVLETTMRHFSCLTEGDVICIPYNDR 92
            +G RTHCGV+EF+APEG C +P W+MQNLL E G+L++VKNVSLPK  FVKF+PQS+DFLD+SNPRAVLE  +R FSC+T GD IC+PYND+
Sbjct:   68 KGGRTHCGVMEFTAPEGQCIMPFWIMQNLLCEEGALISVKNVSLPKASFVKFKPQSVDFLDISNPRAVLERQLRTFSCVTVGDQICLPYNDK 159          
BLAST of mRNA_H-elongata_contig73528.15043.1 vs. uniprot
Match: A0A7S2HLE7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HLE7_9STRA)

HSP 1 Score: 148 bits (374), Expect = 4.380e-41
Identity = 64/92 (69.57%), Postives = 81/92 (88.04%), Query Frame = 0
Query:    1 QGSRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGMFVKFQPQSLDFLDMSNPRAVLETTMRHFSCLTEGDVICIPYNDR 92
            +G+ THCGVLEF+A EGSCY+P WMMQNLL+E GS+LTV NVSLPK  FVK QPQ +DFL+++NPRAVLE  +R+FSC+T+GDVIC+PYN++
Sbjct:   70 KGTMTHCGVLEFTAEEGSCYVPFWMMQNLLIEEGSVLTVTNVSLPKASFVKLQPQHVDFLEITNPRAVLEHALRNFSCITKGDVICVPYNEK 161          
BLAST of mRNA_H-elongata_contig73528.15043.1 vs. uniprot
Match: A0A7S4A370_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A370_9STRA)

HSP 1 Score: 145 bits (366), Expect = 5.310e-41
Identity = 65/91 (71.43%), Postives = 78/91 (85.71%), Query Frame = 0
Query:    2 GSRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGMFVKFQPQSLDFLDMSNPRAVLETTMRHFSCLTEGDVICIPYNDR 92
            G RTHCGVLEF+A EG+ Y+PHWMM NLLLE GS+L+V+NVSLPK  FVKF+PQ +DFLD+SNPRAVLE  +R FSC+T GD IC+PYN+R
Sbjct:   59 GKRTHCGVLEFTAAEGNVYLPHWMMNNLLLEEGSVLSVRNVSLPKAKFVKFKPQHVDFLDISNPRAVLEKQLRMFSCVTVGDQICLPYNNR 149          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73528.15043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTQ5_ECTSI7.070e-5793.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CM39_9STRA8.190e-4576.09Ubiquitin fusion degradation protein UFD1-domain-c... [more]
A0A6V1UUZ4_HETAK7.330e-4371.43Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0Y6V8_AURAN1.210e-4275.28Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2V4N8_9STRA3.410e-4271.43Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
B8BWC2_THAPS9.640e-4269.57Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A4D9D4Y4_9STRA1.550e-4173.63Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3K3U4_9STRA3.880e-4169.57Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2HLE7_9STRA4.380e-4169.57Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4A370_9STRA5.310e-4171.43Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042299Ufd1-like, Nn domainGENE3D2.40.40.50coord: 1..45
e-value: 1.6E-17
score: 64.9
IPR004854Ubiquitin fusion degradation protein Ufd1-likePFAMPF03152UFD1coord: 3..91
e-value: 2.8E-39
score: 134.4
IPR004854Ubiquitin fusion degradation protein Ufd1-likePANTHERPTHR12555UBIQUITIN FUSION DEGRADATON PROTEIN 1coord: 4..91
NoneNo IPR availableGENE3D3.10.330.10coord: 47..92
e-value: 7.0E-19
score: 69.5
NoneNo IPR availablePANTHERPTHR12555:SF13UBIQUITIN RECOGNITION FACTOR IN ER-ASSOCIATED DEGRADATION PROTEIN 1coord: 4..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73528contigH-elongata_contig73528:973..1900 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73528.15043.1mRNA_H-elongata_contig73528.15043.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73528 973..1900 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73528.15043.1 ID=prot_H-elongata_contig73528.15043.1|Name=mRNA_H-elongata_contig73528.15043.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp
QGSRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGMFV
KFQPQSLDFLDMSNPRAVLETTMRHFSCLTEGDVICIPYNDR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042299Ufd1-like_Nn
IPR004854Ufd1-like