prot_H-elongata_contig73458.15035.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73458.15035.1
Unique Nameprot_H-elongata_contig73458.15035.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length46
Homology
BLAST of mRNA_H-elongata_contig73458.15035.1 vs. uniprot
Match: D7FZS9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZS9_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 1.430e-16
Identity = 35/46 (76.09%), Postives = 41/46 (89.13%), Query Frame = 0
Query:    1 MLGRGLMKFLDREPVAAVSIVIGVFGFSLPLIVPPIRESMGLSTKQ 46
            ML RGL+KF+DREPVAAVS+ +G FGFSLP IVPPIR+S+GL TKQ
Sbjct:    1 MLRRGLLKFVDREPVAAVSLGLGFFGFSLPFIVPPIRQSLGLCTKQ 46          
BLAST of mRNA_H-elongata_contig73458.15035.1 vs. uniprot
Match: D0MTW1_PHYIT (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=D0MTW1_PHYIT)

HSP 1 Score: 52.0 bits (123), Expect = 1.180e-7
Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    1 MLGRGLMKFLDREPVAAVSIVIGVFGFSLPLIVPPIRESMGLSTKQ 46
            +LG+ +  +LDREP+  +S  IG  G +LPL+V PIR SMGL T Q
Sbjct:    2 VLGKFIRHYLDREPMVVLSCAIGAVGVTLPLVVVPIRRSMGLPTDQ 47          
BLAST of mRNA_H-elongata_contig73458.15035.1 vs. uniprot
Match: M4BD06_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BD06_HYAAE)

HSP 1 Score: 51.2 bits (121), Expect = 2.370e-7
Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    1 MLGRGLMKFLDREPVAAVSIVIGVFGFSLPLIVPPIRESMGLSTKQ 46
            ++G+ L  +LDREP+  VS  IG    SLPL+V P+R SMGL T Q
Sbjct:    2 VVGKFLRHYLDREPMVVVSCAIGAVALSLPLVVVPLRRSMGLPTDQ 47          
BLAST of mRNA_H-elongata_contig73458.15035.1 vs. uniprot
Match: A0A484ECY2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ECY2_BRELC)

HSP 1 Score: 49.7 bits (117), Expect = 9.620e-7
Identity = 22/45 (48.89%), Postives = 30/45 (66.67%), Query Frame = 0
Query:    2 LGRGLMKFLDREPVAAVSIVIGVFGFSLPLIVPPIRESMGLSTKQ 46
            LG+ +  +LDREP+  +S  IG  G +LPL+V PIR S+G  T Q
Sbjct:    3 LGKFIRYYLDREPMVVISCAIGAMGVTLPLVVVPIRRSLGFPTDQ 47          
BLAST of mRNA_H-elongata_contig73458.15035.1 vs. uniprot
Match: A0A8K1FDU6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDU6_PYTOL)

HSP 1 Score: 49.3 bits (116), Expect = 1.370e-6
Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 0
Query:    3 GRGLMKFLDREPVAAVSIVIGVFGFSLPLIVPPIRESMGLSTKQ 46
            GR +  ++DREPV  +S  IG     LPL+V PIR SMGL T+Q
Sbjct:    9 GRFVRYYIDREPVVVLSCTIGAVAVGLPLVVVPIRRSMGLPTEQ 52          
BLAST of mRNA_H-elongata_contig73458.15035.1 vs. uniprot
Match: A0A3R7KMV3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KMV3_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 2.400e-6
Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 0
Query:    3 GRGLMKFLDREPVAAVSIVIGVFGFSLPLIVPPIRESMGLSTKQ 46
            G+ +  +LDREP+  +S  IG    S+PL+V PIR SMGL T Q
Sbjct:    5 GKFIRYYLDREPMVVLSCAIGTVALSMPLVVVPIRRSMGLPTDQ 48          
BLAST of mRNA_H-elongata_contig73458.15035.1 vs. uniprot
Match: A0A6A3Y528_9STRA (E2F_TDP domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Y528_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 3.340e-6
Identity = 24/45 (53.33%), Postives = 30/45 (66.67%), Query Frame = 0
Query:    2 LGRGLMKFLDREPVAAVSIVIGVFGFSLPLIVPPIRESMGLSTKQ 46
            LG+ +  +LDREP+  +S  IG    SLPL+V PIR SMGL T Q
Sbjct:  377 LGKFIRHYLDREPMVVISCAIGAVAVSLPLVVVPIRRSMGLPTDQ 421          
BLAST of mRNA_H-elongata_contig73458.15035.1 vs. uniprot
Match: A0A3M6VHD8_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHD8_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 7.350e-6
Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 0
Query:    9 FLDREPVAAVSIVIGVFGFSLPLIVPPIRESMGLSTKQ 46
            +LDREP+  +S  IG    S+PL+V PIR+SMGL T Q
Sbjct:   10 YLDREPMVVLSCAIGAVAISMPLVVVPIRQSMGLPTDQ 47          
BLAST of mRNA_H-elongata_contig73458.15035.1 vs. uniprot
Match: A0A662X539_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X539_9STRA)

HSP 1 Score: 47.4 bits (111), Expect = 7.860e-6
Identity = 22/44 (50.00%), Postives = 27/44 (61.36%), Query Frame = 0
Query:    3 GRGLMKFLDREPVAAVSIVIGVFGFSLPLIVPPIRESMGLSTKQ 46
            G+ L  +LDREP    S  IG    +LPL+V P+R SMGL T Q
Sbjct:    4 GKFLRYYLDREPTVVASCAIGAVALALPLVVVPLRRSMGLPTDQ 47          
BLAST of mRNA_H-elongata_contig73458.15035.1 vs. uniprot
Match: A0A067D1D1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D1D1_SAPPC)

HSP 1 Score: 47.8 bits (112), Expect = 7.880e-6
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 0
Query:    3 GRGLMKFLDREPVAAVSIVIGVFGFSLPLIVPPIRESMGLSTKQ 46
            GR    ++DREPV   S  +G  G S+PLIV P+R S+G  T Q
Sbjct:   31 GRFFRYYMDREPVVVASFALGTLGLSMPLIVVPLRRSLGYPTDQ 74          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73458.15035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FZS9_ECTSI1.430e-1676.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D0MTW1_PHYIT1.180e-752.17Uncharacterized protein n=12 Tax=Phytophthora TaxI... [more]
M4BD06_HYAAE2.370e-752.17Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A484ECY2_BRELC9.620e-748.89Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A8K1FDU6_PYTOL1.370e-652.27Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R7KMV3_9STRA2.400e-650.00Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A6A3Y528_9STRA3.340e-653.33E2F_TDP domain-containing protein n=9 Tax=Phytopht... [more]
A0A3M6VHD8_9STRA7.350e-655.26Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A662X539_9STRA7.860e-650.00Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A067D1D1_SAPPC7.880e-647.73Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..46
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73458contigH-elongata_contig73458:1512..1649 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73458.15035.1mRNA_H-elongata_contig73458.15035.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73458 1488..1649 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73458.15035.1 ID=prot_H-elongata_contig73458.15035.1|Name=mRNA_H-elongata_contig73458.15035.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=46bp
MLGRGLMKFLDREPVAAVSIVIGVFGFSLPLIVPPIRESMGLSTKQ
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