prot_H-elongata_contig73351.15025.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73351.15025.1
Unique Nameprot_H-elongata_contig73351.15025.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length46
Homology
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BLAST of mRNA_H-elongata_contig73351.15025.1 vs. uniprot
Match: G3G4N4_9PHAE (T-complex protein 1 epsilon subunit (Fragment) n=22 Tax=Fucaceae TaxID=3010 RepID=G3G4N4_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 1.180e-12
Identity = 35/41 (85.37%), Postives = 36/41 (87.80%), Query Frame = 0 
Query:    6 ARLPARTCSTPLISSAIRETATLQLISAEPPPYTIRLSLIR 46
            A+L    CSTP ISSAIRETATLQLISAEPPPYTIRLSLIR
Sbjct:   78 AKLRTAYCSTPFISSAIRETATLQLISAEPPPYTIRLSLIR 118
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73351.15025.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
G3G4N4_9PHAE1.180e-1285.37T-complex protein 1 epsilon subunit (Fragment) n=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73351contigH-elongata_contig73351:1065..1202 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73351.15025.1mRNA_H-elongata_contig73351.15025.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73351 1065..1208 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73351.15025.1 ID=prot_H-elongata_contig73351.15025.1|Name=mRNA_H-elongata_contig73351.15025.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=46bp
MVLLPARLPARTCSTPLISSAIRETATLQLISAEPPPYTIRLSLIR
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