prot_H-elongata_contig73145.14992.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73145.14992.1
Unique Nameprot_H-elongata_contig73145.14992.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length124
Homology
BLAST of mRNA_H-elongata_contig73145.14992.1 vs. uniprot
Match: D7FN81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN81_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 2.530e-64
Identity = 104/121 (85.95%), Postives = 111/121 (91.74%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESRLPEALHNHLSAECAGGAIRCRRDAVDYLTWTFFFVRLLANPSYYGLEGGDTEGVQAHLLDLVDTTLKDLAGAGCIELGGD 121
            MIGRAGRPQFDDHAVACILVHEPKKNF+KKFLYEPFPVES+LP +LHNHLSAECAGGAIR RRDAVDYLTWTF+FVRLLANPS+YGLE   TEGVQ HLL LV++TL DL  AGCIELGGD
Sbjct: 1825 MIGRAGRPQFDDHAVACILVHEPKKNFFKKFLYEPFPVESKLPASLHNHLSAECAGGAIRSRRDAVDYLTWTFYFVRLLANPSFYGLEDTSTEGVQEHLLGLVESTLADLEDAGCIELGGD 1945          
BLAST of mRNA_H-elongata_contig73145.14992.1 vs. uniprot
Match: A0A7S2BB24_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BB24_9STRA)

HSP 1 Score: 171 bits (434), Expect = 9.210e-49
Identity = 76/121 (62.81%), Postives = 96/121 (79.34%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESRLPEALHNHLSAECAGGAIRCRRDAVDYLTWTFFFVRLLANPSYYGLEGGDTEGVQAHLLDLVDTTLKDLAGAGCIELGGD 121
            M+GRAGRPQFDD  ++C+ V + KKNFYKKFLYEPFPVES L + LHNH++AE AGG I+ ++DAV+YLTWT+FF RLL NP+YY L    T+GVQ +LL L+DTT+ DL  AGC+E+  D
Sbjct:   36 MMGRAGRPQFDDKGISCVFVEQSKKNFYKKFLYEPFPVESSLKDVLHNHMNAEVAGGTIKNKQDAVEYLTWTYFFRRLLVNPAYYHLHESSTDGVQKYLLALIDTTMDDLENAGCVEIEDD 156          
BLAST of mRNA_H-elongata_contig73145.14992.1 vs. uniprot
Match: A0A7S1T1Q3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T1Q3_9CHLO)

HSP 1 Score: 164 bits (414), Expect = 2.790e-48
Identity = 76/122 (62.30%), Postives = 90/122 (73.77%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESRLPEALHNHLSAECAGGAIRCRRDAVDYLTWTFFFVRLLANPSYYGLEGGDTEGVQAHLLDLVDTTLKDLAGAGCIELGGDG 122
            M+GRAGRPQ+D H VA I+VHEPKKNFYKKFLYEPFPVES LPE L +H++AE  GG +R  +DA+DYLTWTFF+ RLL NPSYY LE  + E V   L  +VD     L  AGC+E  G+G
Sbjct:   20 MMGRAGRPQYDKHGVAVIMVHEPKKNFYKKFLYEPFPVESSLPEQLPDHINAEVVGGTVRSMQDALDYLTWTFFYRRLLQNPSYYDLESTEAESVNGFLSTMVDDVFAALEEAGCVETDGEG 141          
BLAST of mRNA_H-elongata_contig73145.14992.1 vs. uniprot
Match: W7TU71_9STRA (Activating signal cointegrator 1 complex subunit 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TU71_9STRA)

HSP 1 Score: 166 bits (421), Expect = 2.480e-45
Identity = 77/124 (62.10%), Postives = 96/124 (77.42%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESRLPEALHNHLSAECAGGAIRCRRDAVDYLTWTFFFVRLLANPSYYGLEGGDTEGVQAHLLDLVDTTLKDLAGAGCIELGGDGMG 124
            M+GRAGRPQFD   VACILVHEPKKNF KKFLYEPFPVES L + LHNHL+AE +GG+++ +  A++YLTWTFFF RL+ NP+YY LE    E VQ++LL+L++   +DL  AGCIE+  D  G
Sbjct: 1742 MMGRAGRPQFDTRGVACILVHEPKKNFIKKFLYEPFPVESSLKDVLHNHLNAEVSGGSVQNKEQAMEYLTWTFFFRRLVMNPTYYSLEETAPEAVQSYLLELINGVFEDLEDAGCIEIDEDEFG 1865          
BLAST of mRNA_H-elongata_contig73145.14992.1 vs. uniprot
Match: A0A7S0PZ95_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PZ95_9EUKA)

HSP 1 Score: 162 bits (410), Expect = 6.710e-45
Identity = 74/123 (60.16%), Postives = 91/123 (73.98%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESRLPEALHNHLSAECAGGAIRCRRDAVDYLTWTFFFVRLLANPSYYGLEGGDTEGVQAHLLDLVDTTLKDLAGAGCIELGGDGM 123
            M+GRAGRPQFD+  VACILVHEPKK FYKKFLYEPFPVES+L   LH+H +AE   G IR ++DAVD+LTWT+F+ RL  NP+YY       EG  A L +LV+ T+ DL  AGC+E+  DG+
Sbjct:  229 MMGRAGRPQFDERGVACILVHEPKKTFYKKFLYEPFPVESQLQNQLHDHFNAEVVTGTIRSKQDAVDFLTWTYFYRRLGKNPAYYSQPDASEEGTAAFLSELVEATISDLENAGCVEVADDGV 351          
BLAST of mRNA_H-elongata_contig73145.14992.1 vs. uniprot
Match: UPI00053A131A (DExH-box ATP-dependent RNA helicase DExH14-like n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00053A131A)

HSP 1 Score: 154 bits (390), Expect = 1.500e-44
Identity = 73/118 (61.86%), Postives = 87/118 (73.73%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESRLPEALHNHLSAECAGGAIRCRRDAVDYLTWTFFFVRLLANPSYYGLEGGDTEGVQAHLLDLVDTTLKDLAGAGCIEL 118
            M+GRAGRPQFD H  A ILVHEPKK+FYKKFLYEPFPVES L E LH+H +AE   G I  + DAV YLTWT+ F RL+ANP+YYGLEG   E V ++L  LV  T  DL  +GC+++
Sbjct:   53 MMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLKEKLHDHFNAEIVSGTIGNKEDAVHYLTWTYLFRRLMANPAYYGLEGTQDETVCSYLSRLVQNTFDDLEDSGCLKV 170          
BLAST of mRNA_H-elongata_contig73145.14992.1 vs. uniprot
Match: A0A250WZI2_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WZI2_9CHLO)

HSP 1 Score: 164 bits (415), Expect = 1.600e-44
Identity = 78/121 (64.46%), Postives = 89/121 (73.55%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESRLPEALHNHLSAECAGGAIRCRRDAVDYLTWTFFFVRLLANPSYYGLEGGDTEGVQAHLLDLVDTTLKDLAGAGCIELGGD 121
            M+GRAGRPQ+D H VA I+VHEPKK FYK+FLYEPFPVES LP  L NH +AE   G I CR+DAVDYLTWTFFF RLL NPSYY LE    E +  +L +LV+  L  L  AGC+ LGGD
Sbjct: 1762 MMGRAGRPQYDKHGVAVIMVHEPKKQFYKRFLYEPFPVESSLPGQLANHFNAEVVAGTITCRQDAVDYLTWTFFFRRLLQNPSYYDLEETTAEALNVYLTELVEGALVALEEAGCVVLGGD 1882          
BLAST of mRNA_H-elongata_contig73145.14992.1 vs. uniprot
Match: A0A7S0NSC9_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NSC9_9EUKA)

HSP 1 Score: 163 bits (413), Expect = 2.920e-44
Identity = 77/124 (62.10%), Postives = 93/124 (75.00%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESRLPEALHNHLSAECAGGAIRCRRDAVDYLTWTFFFVRLLANPSYYGLEGGDTEGVQAHLLDLVDTTLKDLAGAGCIELGGDGMG 124
            M+GRAGRPQFDD  +A ILVHEPKK FYKKFLYEPFPVES+L E LH+H +AE   G+IR ++DAVD+LTWT+F+ RL  NPSYY       EG  A L  LV+TT+ DL  AGC+E+  DG+G
Sbjct:  880 MMGRAGRPQFDDTGIAVILVHEPKKTFYKKFLYEPFPVESQLQEQLHDHFNAEVVSGSIRSKQDAVDFLTWTYFYRRLGKNPSYYHQPDASEEGTAAFLSALVETTVADLENAGCLEVADDGVG 1003          
BLAST of mRNA_H-elongata_contig73145.14992.1 vs. uniprot
Match: A0A7S3UTV5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTV5_HETAK)

HSP 1 Score: 161 bits (408), Expect = 3.400e-44
Identity = 77/113 (68.14%), Postives = 90/113 (79.65%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESRLPEALHNHLSAECAGGAIRCRRDAVDYLTWTFFFVRLLANPSYYGLEGGDTEGVQAHLLDLVDTTLKDLAGA 113
            M+GRAGRPQFDD AVA +LVHEPKK FY+KFLY PFPVES L E LHNH+SAE AGG+I+ ++DAV+YLTWT+FF RL+ NP+YY LE    EGVQ +LL LVD  L DL  A
Sbjct:  528 MMGRAGRPQFDDTAVAAVLVHEPKKIFYQKFLYSPFPVESSLREYLHNHISAEVAGGSIKSKQDAVEYLTWTYFFRRLVMNPTYYHLEDPSPEGVQDYLLSLVDAVLTDLEAA 640          
BLAST of mRNA_H-elongata_contig73145.14992.1 vs. uniprot
Match: A0A8J4D9Y5_9CHLO (Uncharacterized protein n=3 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D9Y5_9CHLO)

HSP 1 Score: 163 bits (412), Expect = 4.060e-44
Identity = 79/124 (63.71%), Postives = 91/124 (73.39%), Query Frame = 0
Query:    1 MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESRLPEALHNHLSAECAGGAIRCRRDAVDYLTWTFFFVRLLANPSYYGLEGGDTEGVQAHLLDLVDTTLKDLAGAGCIELGGDGMG 124
            M+GRAGRPQFD H VA ILVHEPKK FYK+FLYEPFPVES L + + +H +AE   G I  R+DAVDYLTWT+FF RLL NPSYY LE  D++ V A++  LV T L  L  AGCI LGGD  G
Sbjct: 1793 MMGRAGRPQFDRHGVAVILVHEPKKQFYKRFLYEPFPVESSLQDQVADHFNAEVVAGTISSRQDAVDYLTWTYFFRRLLQNPSYYDLEATDSDSVNAYMSGLVATALSQLEEAGCITLGGDDDG 1916          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73145.14992.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN81_ECTSI2.530e-6485.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2BB24_9STRA9.210e-4962.81Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1T1Q3_9CHLO2.790e-4862.30Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
W7TU71_9STRA2.480e-4562.10Activating signal cointegrator 1 complex subunit 3... [more]
A0A7S0PZ95_9EUKA6.710e-4560.16Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
UPI00053A131A1.500e-4461.86DExH-box ATP-dependent RNA helicase DExH14-like n=... [more]
A0A250WZI2_9CHLO1.600e-4464.46Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A7S0NSC9_9EUKA2.920e-4462.10Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S3UTV5_HETAK3.400e-4468.14Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8J4D9Y5_9CHLO4.060e-4463.71Uncharacterized protein n=3 Tax=Volvox reticulifer... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..39
e-value: 4.2E-11
score: 44.6
NoneNo IPR availableGENE3D1.10.10.2530coord: 40..123
e-value: 8.7E-27
score: 95.1
NoneNo IPR availablePANTHERPTHR24075:SF6ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 3coord: 1..119
NoneNo IPR availablePANTHERPTHR24075FAMILY NOT NAMEDcoord: 1..119
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73145contigH-elongata_contig73145:1337..2215 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73145.14992.1mRNA_H-elongata_contig73145.14992.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73145 1337..2218 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73145.14992.1 ID=prot_H-elongata_contig73145.14992.1|Name=mRNA_H-elongata_contig73145.14992.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=124bp
MIGRAGRPQFDDHAVACILVHEPKKNFYKKFLYEPFPVESRLPEALHNHL
SAECAGGAIRCRRDAVDYLTWTFFFVRLLANPSYYGLEGGDTEGVQAHLL
DLVDTTLKDLAGAGCIELGGDGMG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase