prot_H-elongata_contig73112.14988.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig73112.14988.1
Unique Name	prot_H-elongata_contig73112.14988.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	113

Homology

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BLAST of mRNA_H-elongata_contig73112.14988.1 vs. uniprot
Match: A0A6H5LAA3_9PHAE (PHS protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAA3_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 2.850e-59
Identity = 90/112 (80.36%), Postives = 101/112 (90.18%), Query Frame = 0

Query:    1 PLLALAGFIFLPLVWSVPEAMVTAELSSTFPEAAGCVAWVSTAFGPFWGWMEGYCTWVSGVTDNSLYPVLFLDYLVSLLSEDNFIRRDGLGRWGCIVVLNVVMSLLTYRGLR 112
            P LAL GF+FLP+VWS+PEA+VTAELS+TFPEAAGCVAWVSTAFGPFWGWMEGY +W+SGV DNSLYPVLFLDYLVSLL  D+F+R DGLGRWGCIV LN+ +S L YRGLR
Sbjct:  137 PFLALMGFLFLPMVWSIPEALVTAELSTTFPEAAGCVAWVSTAFGPFWGWMEGYASWMSGVADNSLYPVLFLDYLVSLLPRDSFLREDGLGRWGCIVCLNLGLSYLAYRGLR 248

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BLAST of mRNA_H-elongata_contig73112.14988.1 vs. uniprot
Match: A0A5J4Y4F8_9CHLO (Neutral amino acid transport n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y4F8_9CHLO)

HSP 1 Score: 137 bits (344), Expect = 9.020e-36
Identity = 65/111 (58.56%), Postives = 86/111 (77.48%), Query Frame = 0

Query:    1 PLLALAGFIFLPLVWSVPEAMVTAELSSTFPEAAGCVAWVSTAFGPFWGWMEGYCTWVSGVTDNSLYPVLFLDYLVSLLSEDNFIRRDGLGRWGCIVVLNVVMSLLTYRGL 111
            PLLA+ GF+ LP++WSVPEA++TAEL++TFPE +G VAWV+ AFGPFWG+ EG+ +WVSGVTDNSLYPV+FL YL +L+       R G  R   +VV+++ +S L YRGL
Sbjct:   59 PLLAILGFLLLPIIWSVPEALITAELATTFPENSGYVAWVTAAFGPFWGFQEGFWSWVSGVTDNSLYPVMFLSYLDALVPG----LRTGWQRTILLVVVSLALSYLNYRGL 165

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BLAST of mRNA_H-elongata_contig73112.14988.1 vs. uniprot
Match: A0A7S3M5W3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M5W3_9STRA)

HSP 1 Score: 127 bits (318), Expect = 4.030e-35
Identity = 65/118 (55.08%), Postives = 84/118 (71.19%), Query Frame = 0

Query:    1 PLLALAGFIFLPLVWSVPEAMVTAELSSTFPEAAGCVAWVSTAFGPFWGWMEGYCTWVSGVTDNSLYPVLFLDYLVSLLSEDN-----FIRRDG--LGRWGCIVVLNVVMSLLTYRGL 111
            P+ AL GF  L LVW +PEA+VTAELS+  PEA+G VAWV TAFGPFW + +G+ +W+SGVTDN+LYP+LFLD LV LLSED      F  + G  + RW  I++   V++ L +RGL
Sbjct:    2 PMYALLGF-SLFLVWVIPEALVTAELSTALPEASGAVAWVDTAFGPFWAFQKGWLSWLSGVTDNALYPILFLDCLVGLLSEDAEHPSIFAAQGGNPIARWSFILITITVLTYLNFRGL 118

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BLAST of mRNA_H-elongata_contig73112.14988.1 vs. uniprot
Match: A0A835YRE6_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRE6_9STRA)

HSP 1 Score: 132 bits (332), Expect = 2.810e-34
Identity = 63/112 (56.25%), Postives = 84/112 (75.00%), Query Frame = 0

Query:    1 PLLALAGFIFLPLVWSVPEAMVTAELSSTFPEAAGCVAWVSTAFGPFWGWMEGYCTWVSGVTDNSLYPVLFLDYLVSLLSEDNFIRRDGLGRWGCIVVLNVVMSLLTYRGLR 112
            PLL L G + LPL WS+PEA+VTAELS+ FPEA+G VAWVS AFGP+WG+MEGY +W+SGV DNSLY VL LDY++ LL  D+ +  +GL R   ++    ++++L  RGL+
Sbjct:  122 PLLTLLGLVLLPLAWSIPEALVTAELSTAFPEASGFVAWVSAAFGPYWGFMEGYWSWLSGVADNSLYAVLILDYVLRLLDPDSPLM-EGLPRAAFLLATCALLTMLNLRGLQ 232

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BLAST of mRNA_H-elongata_contig73112.14988.1 vs. uniprot
Match: A0A8J9WRS2_9CHLO (Polyamine transporter PUT1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WRS2_9CHLO)

HSP 1 Score: 132 bits (331), Expect = 7.270e-34
Identity = 62/111 (55.86%), Postives = 82/111 (73.87%), Query Frame = 0

Query:    1 PLLALAGFIFLPLVWSVPEAMVTAELSSTFPEAAGCVAWVSTAFGPFWGWMEGYCTWVSGVTDNSLYPVLFLDYLVSLLSEDNFIRRDGLGRWGCIVVLNVVMSLLTYRGL 111
            PL+AL GF+ LP VWSVPEA+VTAEL++ FPE +G VAWV+ AFGPFWG+ EG+ +W+SGVTDNS+YPVLFL YL +++         G  R  C+   ++++S L YRGL
Sbjct:   77 PLVALLGFLILPFVWSVPEALVTAELATAFPEDSGYVAWVTAAFGPFWGFQEGWWSWLSGVTDNSVYPVLFLSYLDAVVPG----LLQGWARSACLFATSILLSYLNYRGL 183

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BLAST of mRNA_H-elongata_contig73112.14988.1 vs. uniprot
Match: A0A2P6TDB3_CHLSO (Putative polyamine transporter isoform B n=2 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TDB3_CHLSO)

HSP 1 Score: 132 bits (333), Expect = 1.150e-33
Identity = 63/111 (56.76%), Postives = 82/111 (73.87%), Query Frame = 0

Query:    1 PLLALAGFIFLPLVWSVPEAMVTAELSSTFPEAAGCVAWVSTAFGPFWGWMEGYCTWVSGVTDNSLYPVLFLDYLVSLLSEDNFIRRDGLGRWGCIVVLNVVMSLLTYRGL 111
            PLLAL GF+ LPL+WSVPEA+VTAEL++TFPE +G VAWV+ AFGPFWG+ +G+  WVSGVTDN++YPVLFLDYL  +      + + G  R   ++  N  ++ L YRGL
Sbjct:  139 PLLALLGFLLLPLIWSVPEALVTAELATTFPENSGYVAWVTAAFGPFWGFQKGFYAWVSGVTDNAVYPVLFLDYLQQVYP----VFQSGWPRMVFLIGFNAALTYLNYRGL 245

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BLAST of mRNA_H-elongata_contig73112.14988.1 vs. uniprot
Match: A0A059LGR7_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LGR7_9CHLO)

HSP 1 Score: 126 bits (317), Expect = 1.600e-33
Identity = 61/111 (54.95%), Postives = 81/111 (72.97%), Query Frame = 0

Query:    1 PLLALAGFIFLPLVWSVPEAMVTAELSSTFPEAAGCVAWVSTAFGPFWGWMEGYCTWVSGVTDNSLYPVLFLDYLVSLLSEDNFIRRDGLGRWGCIVVLNVVMSLLTYRGL 111
            PLLA+ GF+ LPLVWSVPEA+VTAEL++ FPE AG VAWV+ AFGP WG+ EG+ +W+SGVTDN++YPV+ L Y+  L+S    +   G  R   ++ LN  ++ L YRGL
Sbjct:   57 PLLAILGFLILPLVWSVPEALVTAELATAFPENAGYVAWVTAAFGPAWGFQEGFWSWLSGVTDNAVYPVMILTYVGELVS----LPTSGWPRVALLLALNAGLAYLNYRGL 163

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BLAST of mRNA_H-elongata_contig73112.14988.1 vs. uniprot
Match: A0A7I4E6B8_PHYPA (Uncharacterized protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4E6B8_PHYPA)

HSP 1 Score: 130 bits (328), Expect = 1.990e-33
Identity = 57/111 (51.35%), Postives = 80/111 (72.07%), Query Frame = 0

Query:    1 PLLALAGFIFLPLVWSVPEAMVTAELSSTFPEAAGCVAWVSTAFGPFWGWMEGYCTWVSGVTDNSLYPVLFLDYLVSLLSEDNFIRRDGLGRWGCIVVLNVVMSLLTYRGL 111
            PLLA+ GF+  P VWS+PEA++TAEL++ FPE  G V W+S AFG FWG+ EG+C W+SGV DN+LYPVLFLDY   ++     +  DG  R+  ++V+ ++++ L YRGL
Sbjct:  101 PLLAIVGFLVFPFVWSIPEALITAELATAFPENGGYVVWISAAFGEFWGFQEGWCKWISGVADNALYPVLFLDYFKRVVP----LFADGPARYIALIVITILLTYLNYRGL 207

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BLAST of mRNA_H-elongata_contig73112.14988.1 vs. uniprot
Match: W9SCG8_9ROSA (Y+L amino acid transporter 2 n=1 Tax=Morus notabilis TaxID=981085 RepID=W9SCG8_9ROSA)

HSP 1 Score: 130 bits (326), Expect = 2.050e-33
Identity = 58/111 (52.25%), Postives = 82/111 (73.87%), Query Frame = 0

Query:    1 PLLALAGFIFLPLVWSVPEAMVTAELSSTFPEAAGCVAWVSTAFGPFWGWMEGYCTWVSGVTDNSLYPVLFLDYLVSLLSEDNFIRRDGLGRWGCIVVLNVVMSLLTYRGL 111
            PLLALAGF+  P+VWS+P A++TAE+ +TFPE +GC+ W+S+A GPFWG+ +G+  WVSGV DN+LYP+LFLDYL S       +   G+ R   ++V  VV++ ++YRGL
Sbjct:   56 PLLALAGFLVFPIVWSIPGALITAEMGTTFPENSGCIVWMSSALGPFWGFQQGWMKWVSGVIDNALYPILFLDYLKSAFP----VLGGGVPRIIAVLVFTVVLTYMSYRGL 162

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BLAST of mRNA_H-elongata_contig73112.14988.1 vs. uniprot
Match: A0A0B0P988_GOSAR (Transporter protein n=23 Tax=Gossypium TaxID=3633 RepID=A0A0B0P988_GOSAR)

HSP 1 Score: 129 bits (325), Expect = 3.090e-33
Identity = 61/111 (54.95%), Postives = 81/111 (72.97%), Query Frame = 0

Query:    1 PLLALAGFIFLPLVWSVPEAMVTAELSSTFPEAAGCVAWVSTAFGPFWGWMEGYCTWVSGVTDNSLYPVLFLDYLVSLLSEDNFIRRDGLGRWGCIVVLNVVMSLLTYRGL 111
            PLLAL GF+ +P VWSVPEA++TAEL + FPE  G V WVS+A GP+WG+ +G+  W+SGV DN+LYPVLFLDYL S +        +GL R   ++VL VV++ ++YRGL
Sbjct:   76 PLLALLGFLLVPFVWSVPEALITAELGTMFPENGGYVVWVSSALGPYWGFQQGWMKWLSGVIDNALYPVLFLDYLKSAIPA----LENGLPRTVAVLVLTVVLTYMSYRGL 182

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig73112.14988.1 vs. uniprot

BLAST of mRNA_H-elongata_contig73112.14988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5LAA3_9PHAE	2.850e-59	80.36	PHS protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0...	[more]
A0A5J4Y4F8_9CHLO	9.020e-36	58.56	Neutral amino acid transport n=1 Tax=Trebouxia sp....	[more]
A0A7S3M5W3_9STRA	4.030e-35	55.08	Hypothetical protein (Fragment) n=1 Tax=Spumella e...	[more]
A0A835YRE6_9STRA	2.810e-34	56.25	Amino acid permease-domain-containing protein n=1 ...	[more]
A0A8J9WRS2_9CHLO	7.270e-34	55.86	Polyamine transporter PUT1 n=1 Tax=Coccomyxa sp. O...	[more]
A0A2P6TDB3_CHLSO	1.150e-33	56.76	Putative polyamine transporter isoform B n=2 Tax=C...	[more]
A0A059LGR7_9CHLO	1.600e-33	54.95	Uncharacterized protein (Fragment) n=1 Tax=Helicos...	[more]
A0A7I4E6B8_PHYPA	1.990e-33	51.35	Uncharacterized protein n=4 Tax=Physcomitrium pate...	[more]
W9SCG8_9ROSA	2.050e-33	52.25	Y+L amino acid transporter 2 n=1 Tax=Morus notabil...	[more]
A0A0B0P988_GOSAR	3.090e-33	54.95	Transporter protein n=23 Tax=Gossypium TaxID=3633 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002293	Amino acid/polyamine transporter I	PFAM	PF13520	AA_permease_2	coord: 7..109 e-value: 5.5E-10 score: 38.6
None	No IPR available	GENE3D	1.20.1740.10		coord: 2..112 e-value: 9.7E-11 score: 43.0
None	No IPR available	PANTHER	PTHR45826	FAMILY NOT NAMED	coord: 1..112
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 90..108
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 17..89
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..11
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 12..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..16
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 109..112
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..16 score: 0.885

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig73112	contig	H-elongata_contig73112:745..1780 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig73112.14988.1	mRNA_H-elongata_contig73112.14988.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig73112 745..1780 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig73112.14988.1 ID=prot_H-elongata_contig73112.14988.1|Name=mRNA_H-elongata_contig73112.14988.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=113bp
PLLALAGFIFLPLVWSVPEAMVTAELSSTFPEAAGCVAWVSTAFGPFWGW
MEGYCTWVSGVTDNSLYPVLFLDYLVSLLSEDNFIRRDGLGRWGCIVVLN
VVMSLLTYRGLR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002293	AA/rel_permease1