prot_H-elongata_contig73104.14987.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73104.14987.1
Unique Nameprot_H-elongata_contig73104.14987.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
BLAST of mRNA_H-elongata_contig73104.14987.1 vs. uniprot
Match: E6ZER5_ECTSI (Conserved hypothetical mitochondrial protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZER5_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 4.090e-9
Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    1 LTHQKTFALFNASNLKTSKIQKLKLIVKSAKLYFIPFTSQP 41
            L+ QKTFALFNASNLKTSKI +++L +K+AKLYFIP    P
Sbjct:   16 LSKQKTFALFNASNLKTSKITEIRLFLKNAKLYFIPLYLNP 56          
BLAST of mRNA_H-elongata_contig73104.14987.1 vs. uniprot
Match: A0A5K1KEM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=A0A5K1KEM9_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 8.170e-9
Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    1 LTHQKTFALFNASNLKTSKIQKLKLIVKSAKLYFIPFTSQP 41
            L+ QKTFALFNASNLKTSKI +++L +K+AKLYFIP    P
Sbjct:   16 LSKQKTFALFNASNLKTSKITEIRLSLKNAKLYFIPLYLNP 56          
BLAST of mRNA_H-elongata_contig73104.14987.1 vs. uniprot
Match: A0A2R4QQ51_9PHAE (Uncharacterized protein n=3 Tax=Fucus TaxID=3011 RepID=A0A2R4QQ51_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 2.490e-8
Identity = 25/39 (64.10%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    3 HQKTFALFNASNLKTSKIQKLKLIVKSAKLYFIPFTSQP 41
            +++TFA+FNASNLKTSKI+K+KL+ KS KLYF+P    P
Sbjct:   19 NEQTFAIFNASNLKTSKIEKIKLLSKSGKLYFVPLYLMP 57          
BLAST of mRNA_H-elongata_contig73104.14987.1 vs. uniprot
Match: A0A8F0K1C4_9PHAE (Uncharacterized protein n=2 Tax=Ecklonia TaxID=105406 RepID=A0A8F0K1C4_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 2.230e-7
Identity = 24/41 (58.54%), Postives = 33/41 (80.49%), Query Frame = 0
Query:    1 LTHQKTFALFNASNLKTSKIQKLKLIVKSAKLYFIPFTSQP 41
            L  Q+TFALFN SNLKTS+I K++L++++AKLYF+P    P
Sbjct:   16 LPKQRTFALFNGSNLKTSQISKIRLLLQNAKLYFVPLYLNP 56          
BLAST of mRNA_H-elongata_contig73104.14987.1 vs. uniprot
Match: A0A3G5FPR1_9PHAE (Uncharacterized protein n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPR1_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 5.410e-7
Identity = 24/41 (58.54%), Postives = 33/41 (80.49%), Query Frame = 0
Query:    1 LTHQKTFALFNASNLKTSKIQKLKLIVKSAKLYFIPFTSQP 41
            L  +KTFALFNASNLKTSK++++KL ++ AKLY +P   +P
Sbjct:   16 LPKEKTFALFNASNLKTSKVEEIKLSLQKAKLYHVPLYLKP 56          
BLAST of mRNA_H-elongata_contig73104.14987.1 vs. uniprot
Match: A0A4D6E6F0_9PHAE (Uncharacterized protein n=2 Tax=Laminariaceae TaxID=33636 RepID=A0A4D6E6F0_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 1.060e-6
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    1 LTHQKTFALFNASNLKTSKIQKLKLIVKSAKLYFIPFTSQP 41
            L  Q TFALFN SNLKTS+I K++L++++AKLY++P    P
Sbjct:   16 LPKQSTFALFNGSNLKTSQISKIRLLLQNAKLYYVPLYLNP 56          
BLAST of mRNA_H-elongata_contig73104.14987.1 vs. uniprot
Match: A0A7G7WRL3_9PHAE (Uncharacterized protein n=2 Tax=Sargassum TaxID=3015 RepID=A0A7G7WRL3_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 2.060e-6
Identity = 22/41 (53.66%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    1 LTHQKTFALFNASNLKTSKIQKLKLIVKSAKLYFIPFTSQP 41
            ++ Q TFA+ NASNLKTSKI+K+K+ ++  K+YF+PF   P
Sbjct:   16 MSKQTTFAILNASNLKTSKIKKIKMSLRRGKIYFVPFYLTP 56          
BLAST of mRNA_H-elongata_contig73104.14987.1 vs. uniprot
Match: S4S3S2_LAMHY (Uncharacterized protein n=3 Tax=Laminaria TaxID=33637 RepID=S4S3S2_LAMHY)

HSP 1 Score: 50.1 bits (118), Expect = 2.910e-6
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    1 LTHQKTFALFNASNLKTSKIQKLKLIVKSAKLYFIPFTSQP 41
            L  Q+TFALFN SNLKTS+I K++L++++AKLY +P    P
Sbjct:   16 LPKQRTFALFNGSNLKTSQISKIRLLLQNAKLYSVPLYLNP 56          
BLAST of mRNA_H-elongata_contig73104.14987.1 vs. uniprot
Match: V9PAH9_UNDPI (Uncharacterized protein n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=V9PAH9_UNDPI)

HSP 1 Score: 49.3 bits (116), Expect = 5.890e-6
Identity = 25/42 (59.52%), Postives = 34/42 (80.95%), Query Frame = 0
Query:    1 LTHQKTFALFNASNLKTSKIQKLKLIV-KSAKLYFIPFTSQP 41
            L  Q+TFALFNASNLKTS+I K++L++ ++AKLYF+P    P
Sbjct:   16 LPKQQTFALFNASNLKTSQITKIRLLLLQNAKLYFVPLYLNP 57          
BLAST of mRNA_H-elongata_contig73104.14987.1 vs. uniprot
Match: A0A8F0FCU5_9PHAE (Uncharacterized protein n=4 Tax=Alariaceae TaxID=2887 RepID=A0A8F0FCU5_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 5.990e-6
Identity = 23/41 (56.10%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    1 LTHQKTFALFNASNLKTSKIQKLKLIVKSAKLYFIPFTSQP 41
            L  Q+TFALFN SNLK SKI K++L++++AKLY +P    P
Sbjct:   16 LPKQRTFALFNGSNLKASKISKIRLLLQNAKLYSVPLYLTP 56          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73104.14987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
E6ZER5_ECTSI4.090e-968.29Conserved hypothetical mitochondrial protein n=1 T... [more]
A0A5K1KEM9_ECTSI8.170e-968.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2R4QQ51_9PHAE2.490e-864.10Uncharacterized protein n=3 Tax=Fucus TaxID=3011 R... [more]
A0A8F0K1C4_9PHAE2.230e-758.54Uncharacterized protein n=2 Tax=Ecklonia TaxID=105... [more]
A0A3G5FPR1_9PHAE5.410e-758.54Uncharacterized protein n=1 Tax=Cladosiphon okamur... [more]
A0A4D6E6F0_9PHAE1.060e-656.10Uncharacterized protein n=2 Tax=Laminariaceae TaxI... [more]
A0A7G7WRL3_9PHAE2.060e-653.66Uncharacterized protein n=2 Tax=Sargassum TaxID=30... [more]
S4S3S2_LAMHY2.910e-656.10Uncharacterized protein n=3 Tax=Laminaria TaxID=33... [more]
V9PAH9_UNDPI5.890e-659.52Uncharacterized protein n=1 Tax=Undaria pinnatifid... [more]
A0A8F0FCU5_9PHAE5.990e-656.10Uncharacterized protein n=4 Tax=Alariaceae TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73104contigH-elongata_contig73104:1043..1201 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73104.14987.1mRNA_H-elongata_contig73104.14987.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73104 1043..1280 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73104.14987.1 ID=prot_H-elongata_contig73104.14987.1|Name=mRNA_H-elongata_contig73104.14987.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
LTHQKTFALFNASNLKTSKIQKLKLIVKSAKLYFIPFTSQPCHRIPINNG
NL*
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