prot_H-elongata_contig73017.14980.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73017.14980.1
Unique Nameprot_H-elongata_contig73017.14980.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length128
Homology
BLAST of mRNA_H-elongata_contig73017.14980.1 vs. uniprot
Match: A0A6H5KNV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNV2_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 6.120e-56
Identity = 91/128 (71.09%), Postives = 107/128 (83.59%), Query Frame = 0
Query:    1 MYLAQVTRYDILYAVNQLARAMSKPAKVHMGAAKHLLCYLAGSADFSMTYKQGGLRLAAFSDANWGNDPDNGRFPSSYIVMLANASISFKVGLQGLTTQSTMEVELVAAALTMKEAVFCSNMILELGF 128
            MY+AQV RYDI+YA  QLAR M+KP+KVHM AAKH L YLAG+ DFS+TYK+GG +LA FSD+NW N+PDNG+  SSY+ MLANA +SF+ GLQGLT  STME ELVA+AL MKEAVFCSNM+ ELGF
Sbjct:  103 MYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGF 230          
BLAST of mRNA_H-elongata_contig73017.14980.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 3.480e-54
Identity = 91/128 (71.09%), Postives = 107/128 (83.59%), Query Frame = 0
Query:    1 MYLAQVTRYDILYAVNQLARAMSKPAKVHMGAAKHLLCYLAGSADFSMTYKQGGLRLAAFSDANWGNDPDNGRFPSSYIVMLANASISFKVGLQGLTTQSTMEVELVAAALTMKEAVFCSNMILELGF 128
            MY+AQV RYDI+YA  QLAR M+KP+KVHM AAKH L YLAG+ DFS+TYK+GG +LA FSD+NW N+PDNG+  SSY+ MLANA +SF+ GLQGLT  STME ELVA+AL MKEAVFCSNM+ ELGF
Sbjct:  226 MYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGF 353          
BLAST of mRNA_H-elongata_contig73017.14980.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 2.840e-53
Identity = 87/128 (67.97%), Postives = 103/128 (80.47%), Query Frame = 0
Query:    1 MYLAQVTRYDILYAVNQLARAMSKPAKVHMGAAKHLLCYLAGSADFSMTYKQGGLRLAAFSDANWGNDPDNGRFPSSYIVMLANASISFKVGLQGLTTQSTMEVELVAAALTMKEAVFCSNMILELGF 128
            MY+AQV RYDI+YA   LAR M+KP+KVH   AK  L YLAG+ DFS+TYK+GG +LA FSD+NW N+PDNG+  SSY+ MLANA +SF+ GLQGLT  STME ELVA+AL MKEAVFCSNM+ ELGF
Sbjct:    1 MYIAQVLRYDIMYATGHLARPMAKPSKVHTVTAKQTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGF 128          
BLAST of mRNA_H-elongata_contig73017.14980.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 5.190e-52
Identity = 90/127 (70.87%), Postives = 107/127 (84.25%), Query Frame = 0
Query:    1 MYLAQVTRYDILYAVNQLARAMSKPAKVHMGAAKHLLCYLAGSADFSMTYKQGGLRLAAFSDANWGNDPDNGRFPSSYIVMLANASISFKVGLQGLTTQSTMEVELVAAALTMKEAVFCSNMILELG 127
            MY+AQV RYDI+YA  QLAR+M+KP+KVHM AAKH L YLAG+ DFS+TYK+GG +LA FSD+NW N+PDNG+  SSY+ MLANA +SF+ GLQGLT  STME ELVA+AL MKEAVFCSNM+ ELG
Sbjct:  447 MYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELG 573          
BLAST of mRNA_H-elongata_contig73017.14980.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 1.170e-51
Identity = 91/128 (71.09%), Postives = 107/128 (83.59%), Query Frame = 0
Query:    1 MYLAQVTRYDILYAVNQLARAMSKPAKVHMGAAKHLLCYLAGSADFSMTYKQGGLRLAAFSDANWGNDPDNGRFPSSYIVMLANASISFKVGLQGLTTQSTMEVELVAAALTMKEAVFCSNMILELGF 128
            MY+AQV RYDI+YA  QLAR M+KP+KVHM AAKH L YLAG+ DFS+TYK+GG +LA FSD+NW N+PDNG+  SSY+ MLANA +SF+ GLQGLT  STME ELVA+AL MKEAVFCSNM+ ELGF
Sbjct:  786 MYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGF 913          
BLAST of mRNA_H-elongata_contig73017.14980.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 3.630e-50
Identity = 87/128 (67.97%), Postives = 106/128 (82.81%), Query Frame = 0
Query:    1 MYLAQVTRYDILYAVNQLARAMSKPAKVHMGAAKHLLCYLAGSADFSMTYKQGGLRLAAFSDANWGNDPDNGRFPSSYIVMLANASISFKVGLQGLTTQSTMEVELVAAALTMKEAVFCSNMILELGF 128
            +YLAQ+TRYDI+Y  +QLARAMS P+K+HMGAAKHLL YL+GS DFS+TYK+GG  L A SDANWGN+PDN +  SSYI+M++ A +SFK GLQ LT  ST+E ELVAAAL MKE +FC+NM+ ELGF
Sbjct:  480 IYLAQITRYDIMYCASQLARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTALSDANWGNNPDNRKSMSSYIMMMSKAPVSFKFGLQSLTAMSTLEAELVAAALAMKETIFCTNMMKELGF 607          
BLAST of mRNA_H-elongata_contig73017.14980.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 6.660e-49
Identity = 88/128 (68.75%), Postives = 105/128 (82.03%), Query Frame = 0
Query:    1 MYLAQVTRYDILYAVNQLARAMSKPAKVHMGAAKHLLCYLAGSADFSMTYKQGGLRLAAFSDANWGNDPDNGRFPSSYIVMLANASISFKVGLQGLTTQSTMEVELVAAALTMKEAVFCSNMILELGF 128
            MY+AQV RYDI+YA  QLAR M+KP+KVHM AAKH L YLAG+ DFS+TYK+GG +LA FSD+NW N+PDNG+  SSY+ +LANA +SF+ GLQGLT  STME ELVA+AL M EAVF SNM+ ELGF
Sbjct: 1455 MYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGF 1582          
BLAST of mRNA_H-elongata_contig73017.14980.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 1.420e-46
Identity = 82/128 (64.06%), Postives = 105/128 (82.03%), Query Frame = 0
Query:    1 MYLAQVTRYDILYAVNQLARAMSKPAKVHMGAAKHLLCYLAGSADFSMTYKQGGLRLAAFSDANWGNDPDNGRFPSSYIVMLANASISFKVGLQGLTTQSTMEVELVAAALTMKEAVFCSNMILELGF 128
            +YL+Q+ RYDI+YA +QLAR M+KP+K HMGAAK    YLAG+  F + YK+GG +L AF+D+NWGN+PDNG+  SS++ ML +A ++FK GLQ LTTQSTMEVELVAAAL +KEAVFCSN++ ELGF
Sbjct:  509 IYLSQILRYDIMYATSQLARPMAKPSKNHMGAAKRTFRYLAGTTYFKIPYKRGGFKLTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGF 636          
BLAST of mRNA_H-elongata_contig73017.14980.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 4.230e-45
Identity = 83/128 (64.84%), Postives = 102/128 (79.69%), Query Frame = 0
Query:    1 MYLAQVTRYDILYAVNQLARAMSKPAKVHMGAAKHLLCYLAGSADFSMTYKQGGLRLAAFSDANWGNDPDNGRFPSSYIVMLANASISFKVGLQGLTTQSTMEVELVAAALTMKEAVFCSNMILELGF 128
            MYLAQVTRYDI+Y  +Q ARAMS P+K+HMGAAKHLL YL+GS DFS+TYK+GG  L A S+AN G++ DNG+  SSYI+M++ A  S K GLQ LT  ST+E ELVA+AL MKE +FC+NM+ ELGF
Sbjct:  567 MYLAQVTRYDIMYCASQFARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTASSNANGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAMKEVIFCTNMMKELGF 694          
BLAST of mRNA_H-elongata_contig73017.14980.1 vs. uniprot
Match: A0A6H5JIN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN1_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 2.020e-40
Identity = 72/119 (60.50%), Postives = 91/119 (76.47%), Query Frame = 0
Query:    1 MYLAQVTRYDILYAVNQLARAMSKPAKVHMGAAKHLLCYLAGSADFSMTYKQGGLRLAAFSDANWGNDPDNGRFPSSYIVMLANASISFKVGLQGLTTQSTMEVELVAAALTMKEAVFC 119
            +Y+AQV RYDI+YA  QLAR M+KP+K+HM AAKH L Y+AG+ DF +TYK  G +LA  SD+NW N+PDNG+  + Y+ ML NA + FK G+QG T  STME EL+A+AL MKEAVFC
Sbjct: 1155 VYIAQVLRYDIMYATGQLARPMAKPSKIHMVAAKHTLRYVAGTTDFRITYKSEGFKLATLSDSNWANNPDNGKSTACYLTMLGNAPVRFKSGIQGPTAMSTMEAELIASALAMKEAVFC 1273          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73017.14980.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNV2_9PHAE6.120e-5671.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5U2_9PHAE3.480e-5471.09Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KMK0_9PHAE2.840e-5367.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JME8_9PHAE5.190e-5270.87Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KNH5_9PHAE1.170e-5171.09Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBU1_9PHAE3.630e-5067.97CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KJH6_9PHAE6.660e-4968.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JG39_9PHAE1.420e-4664.06Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L6R7_9PHAE4.230e-4564.84Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JIN1_9PHAE2.020e-4060.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..128
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 6..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73017contigH-elongata_contig73017:2516..2899 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73017.14980.1mRNA_H-elongata_contig73017.14980.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73017 2492..2899 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73017.14980.1 ID=prot_H-elongata_contig73017.14980.1|Name=mRNA_H-elongata_contig73017.14980.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=128bp
MYLAQVTRYDILYAVNQLARAMSKPAKVHMGAAKHLLCYLAGSADFSMTY
KQGGLRLAAFSDANWGNDPDNGRFPSSYIVMLANASISFKVGLQGLTTQS
TMEVELVAAALTMKEAVFCSNMILELGF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like