prot_H-elongata_contig73007.14978.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig73007.14978.1
Unique Name	prot_H-elongata_contig73007.14978.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	265

Homology

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BLAST of mRNA_H-elongata_contig73007.14978.1 vs. uniprot
Match: A0A6H5KYI2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYI2_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 5.330e-51
Identity = 126/304 (41.45%), Postives = 170/304 (55.92%), Query Frame = 0

Query:    1 MRFFVRVFEPPSRSSGQLLDEETTIVENIEGGL-----LVEIQLREGDHLYFSTLYREMMTNFLRSQDGVTITGTFCYQAKKLPEEGEGLVLKSPVNVLPCKSIMNKVDT--SICEFGSSIP-------------DEPMDEDMIEDVMNLVGALEAGFLDVQVDAATSIAGLTEGAEFLEQLCHPTAKKTANALCRASARLLVETDNRPARRQAAVTVANLSSSPELCLSLLDTDPPLSSHKKG---------------LVDALVTLSIQRSKDA----KEEEIGTRRECMRALTNLAESRSAR 265
            +  F+RVF+ P R+SGQL D  +    N + G      LVE QLREGD L+FS L+RE++  F+ +Q+GV + GTF Y+ +  P  GEGL L+  VN+ P ++ +  +       + G S+P                +D DM++DV+ L   L   +LDVQ DAA ++AGLT   + LEQL    A   ANA+  A+ARLLVET +RPARRQAAV VANL+ +P+L  +LL +D                        LV++LV LS+ R   +     EEEIG RRECMRAL  LAESR  R
Sbjct:  253 LSLFIRVFKAPDRASGQLFDNSSVGNNNNDDGAEQTPYLVEAQLREGDRLHFSALFREILRAFM-NQEGVNLVGTFRYKPRTYPATGEGLALEQ-VNMAPSRNSIRLLAERGEATKTGGSLPVPASMARPQVSSSSPELDSDMMDDVVLLADMLSGSYLDVQADAAAAVAGLTTDVKLLEQLSRGAAANAANAIAHAAARLLVETRHRPARRQAAVAVANLTKTPQLRAALLASDXXXXXXXXXXXXXXXXXXXXXXXXLVESLVVLSMGRVDGSAARKSEEEIGMRRECMRALVGLAESRVVR 554

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig73007.14978.1 vs. uniprot

BLAST of mRNA_H-elongata_contig73007.14978.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KYI2_9PHAE	5.330e-51	41.45	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 116..265 e-value: 4.6E-7 score: 31.3
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 127..259

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig73007	contig	H-elongata_contig73007:374..2552 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig73007.14978.1	mRNA_H-elongata_contig73007.14978.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig73007 374..2582 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig73007.14978.1 ID=prot_H-elongata_contig73007.14978.1|Name=mRNA_H-elongata_contig73007.14978.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=265bp
MRFFVRVFEPPSRSSGQLLDEETTIVENIEGGLLVEIQLREGDHLYFSTL
YREMMTNFLRSQDGVTITGTFCYQAKKLPEEGEGLVLKSPVNVLPCKSIM
NKVDTSICEFGSSIPDEPMDEDMIEDVMNLVGALEAGFLDVQVDAATSIA
GLTEGAEFLEQLCHPTAKKTANALCRASARLLVETDNRPARRQAAVTVAN
LSSSPELCLSLLDTDPPLSSHKKGLVDALVTLSIQRSKDAKEEEIGTRRE
CMRALTNLAESRSAR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold