prot_H-elongata_contig73002.14977.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73002.14977.1
Unique Nameprot_H-elongata_contig73002.14977.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length124
Homology
BLAST of mRNA_H-elongata_contig73002.14977.1 vs. uniprot
Match: D7G521_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G521_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 1.470e-55
Identity = 90/119 (75.63%), Postives = 97/119 (81.51%), Query Frame = 0
Query:    5 VTKGLEMNNLRGELYVQVMKQLNKNSTPASVQRCWEVLMMLVTCFPPPKARCRNGAMPGSDVENYVHYFVRCNAPENTRDKFNLAVHMSVYDGDKEKAPAAKEIPPLLSGFFEREISAR 123
            V KGLEM  LRGELYVQ MKQL KN+ PASVQRCWEV+ ML+TCFPPPK           D+ENYVHYFVRCNAPE+TR+KF LAVHMSVYDG KE AP+ KEIPPLLSGFFEREISAR
Sbjct:   99 VAKGLEMTELRGELYVQAMKQLTKNANPASVQRCWEVVTMLLTCFPPPK-----------DMENYVHYFVRCNAPEDTREKFKLAVHMSVYDGVKETAPSVKEIPPLLSGFFEREISAR 206          
BLAST of mRNA_H-elongata_contig73002.14977.1 vs. uniprot
Match: A0A6H5KSK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSK5_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 7.310e-51
Identity = 89/119 (74.79%), Postives = 96/119 (80.67%), Query Frame = 0
Query:    5 VTKGLEMNNLRGELYVQVMKQLNKNSTPASVQRCWEVLMMLVTCFPPPKARCRNGAMPGSDVENYVHYFVRCNAPENTRDKFNLAVHMSVYDGDKEKAPAAKEIPPLLSGFFEREISAR 123
            V KGLEM  LRGELYVQ MKQL KN+ PASVQR WEV+ ML+TCFPPPK           D+ENYVHYFVRCNAPE+TR+KF LAVHMSVYDG KE AP+ KEIPPLLSGFFEREISAR
Sbjct: 1092 VAKGLEMTELRGELYVQAMKQLTKNANPASVQRYWEVVTMLLTCFPPPK-----------DMENYVHYFVRCNAPEDTREKFKLAVHMSVYDGVKETAPSVKEIPPLLSGFFEREISAR 1199          
BLAST of mRNA_H-elongata_contig73002.14977.1 vs. uniprot
Match: A0A7S1U0W2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0W2_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.070e-20
Identity = 45/112 (40.18%), Postives = 70/112 (62.50%), Query Frame = 0
Query:   12 NNLRGELYVQVMKQLNKNSTPASVQRCWEVLMMLVTCFPPPKARCRNGAMPGSDVENYVHYFVRCNAPENTRDKFNLAVHMSVYDGDKEKAPAAKEIPPLLSGFFEREISAR 123
            + LR E Y+QVMKQL  N +  S ++ WEV++ +++ FPPP++           VEN+V  F+R  APE  +DKF++A+H S Y G +    +  E P +LS F+E+E+SA+
Sbjct:  798 SELRAEFYIQVMKQLRNNPSTESAKKGWEVMIFMLSSFPPPES-----------VENFVALFLRQMAPEGQKDKFSIALHASTYGGGRSAPISLPEFPQILSKFYEQEMSAK 898          
BLAST of mRNA_H-elongata_contig73002.14977.1 vs. uniprot
Match: A0A7S2WRB6_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WRB6_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.460e-14
Identity = 37/110 (33.64%), Postives = 62/110 (56.36%), Query Frame = 0
Query:    5 VTKGLEMNN-LRGELYVQVMKQLNKNSTPASVQRCWEVLMMLVTCFPPPKARCRNGAMPGSDVENYVHYFVRCNAPENTRDKFNLAVHMSVYDGDKEKAPAAKEIPPLLS 113
            V+ G++ +  LR E+Y Q++K L +N  P S+ + W++  + +  FP           P +D+ NY+H F+R NAP + +D +   ++   YDG K  APA  +IP L+S
Sbjct: 1275 VSSGIQQSEKLRDEIYCQILKHLTENPDPQSLSQAWKLFALCIQYFP-----------PSTDLGNYLHIFIRNNAPPHLKDSYKQYLYSIEYDGAKPVAPAVDQIPSLVS 1373          
BLAST of mRNA_H-elongata_contig73002.14977.1 vs. uniprot
Match: A0A7S3LM69_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LM69_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 5.860e-9
Identity = 31/103 (30.10%), Postives = 52/103 (50.49%), Query Frame = 0
Query:   13 NLRGELYVQVMKQLNKNSTPASVQRCWEVLMMLVTCFPPPKARCRNGAMPGSDVENYVHYFVRCNAPENTRDKFNLAVHMSVYDGDKEKAPAAKEIPPLLSGF 115
            ++R E++  +MK    N +  SV + W++  + +  F             G D+ NYVH F+R NAP + + K   A++   Y+G K   P+  +IP L+S F
Sbjct:  757 DVRDEIFCLLMKHTTANPSAHSVSQAWKLFGLCIQFF-----------SAGEDLSNYVHIFIRRNAPSHLKQKLIDAMYTREYEGSKTVPPSVDQIPLLISNF 848          
BLAST of mRNA_H-elongata_contig73002.14977.1 vs. uniprot
Match: X6LS73_RETFI (MyTH4 domain-containing protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6LS73_RETFI)

HSP 1 Score: 58.9 bits (141), Expect = 1.020e-7
Identity = 31/110 (28.18%), Postives = 56/110 (50.91%), Query Frame = 0
Query:    7 KGLEMNNLRGELYVQVMKQLNKNSTPASVQRCWEVLMMLVTCFPPPKARCRNGAMPGSDVENYVHYFVRCNAPENTRDKFNLAVHMSVY--DGDKEKAPAAKEIPPLLSG 114
            KG     LR E+Y Q++KQL  N    S+ R W  +++ +  FP           P  ++ENY+  F+R N P+  RD+  +A+   +Y  +   ++ P  +++  +L+G
Sbjct:  204 KGHSEQELRNEIYCQLIKQLTNNPKNQSITRGWNAMILCLYTFP-----------PSQELENYLEVFIR-NQPQERRDRCLIALQSLMYSKNSGSKRPPTLQDMTDILNG 301          
BLAST of mRNA_H-elongata_contig73002.14977.1 vs. uniprot
Match: A0A7S3FHF1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FHF1_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 8.440e-7
Identity = 35/100 (35.00%), Postives = 52/100 (52.00%), Query Frame = 0
Query:   14 LRGELYVQVMKQLNKNSTPASVQRCWEVLMMLVTCFPPPKARCRNGAMPGSDVENYVHYFVRCNAPENTRDKFNLAVHMSVYDGDKEKAPAAKEIPPLLS 113
            L+ E+YVQ+MKQL  N +PAS +  W++  ++V CFPP              VENYV  F+R   P +      L  + +   G + +AP   E+P +LS
Sbjct:  164 LQTEVYVQMMKQLTSNPSPASERLGWQLFALMVQCFPPDPL-----------VENYVANFLR-GGPLSATFYLRLG-YAARRRGPRSRAPLDSELPGMLS 250          
BLAST of mRNA_H-elongata_contig73002.14977.1 vs. uniprot
Match: A0A553P2X3_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553P2X3_TIGCA)

HSP 1 Score: 52.0 bits (123), Expect = 3.630e-5
Identity = 25/73 (34.25%), Postives = 40/73 (54.79%), Query Frame = 0
Query:    5 VTKGLEMNNLRGELYVQVMKQLNKNSTPASVQRCWEVLMMLVTCFPPPKARCR---NGAMPGSDVENYVHYFV 74
            +  G+E   LR E+YVQ ++QLN N     + R W +L ++V  FPP K+  +   +      DVE+ +H +V
Sbjct: 1233 IKNGIEREELRDEIYVQCVRQLNNNPNQEQIDRLWLLLCLVVVAFPPSKSFFKYFVSFLKKNIDVEDPIHQYV 1305          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73002.14977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G521_ECTSI1.470e-5575.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSK5_9PHAE7.310e-5174.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1U0W2_9STRA2.070e-2040.18Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2WRB6_9STRA2.460e-1433.64Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S3LM69_9STRA5.860e-930.10Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
X6LS73_RETFI1.020e-728.18MyTH4 domain-containing protein (Fragment) n=1 Tax... [more]
A0A7S3FHF1_9EUKA8.440e-735.00Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A553P2X3_TIGCA3.630e-534.25Uncharacterized protein n=1 Tax=Tigriopus californ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000857MyTH4 domainPFAMPF00784MyTH4coord: 5..108
e-value: 1.1E-14
score: 54.8
IPR000857MyTH4 domainPROSITEPS51016MYTH4coord: 1..112
score: 20.527
IPR038185MyTH4 domain superfamilyGENE3D1.25.40.530coord: 1..109
e-value: 2.6E-15
score: 58.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73002contigH-elongata_contig73002:875..2766 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73002.14977.1mRNA_H-elongata_contig73002.14977.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73002 875..2766 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73002.14977.1 ID=prot_H-elongata_contig73002.14977.1|Name=mRNA_H-elongata_contig73002.14977.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=124bp
MCVCVTKGLEMNNLRGELYVQVMKQLNKNSTPASVQRCWEVLMMLVTCFP
PPKARCRNGAMPGSDVENYVHYFVRCNAPENTRDKFNLAVHMSVYDGDKE
KAPAAKEIPPLLSGFFEREISAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000857MyTH4_dom
IPR038185MyTH4_dom_sf