prot_H-elongata_contig72842.14965.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig72842.14965.1
Unique Nameprot_H-elongata_contig72842.14965.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length252
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72842.14965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 159..188
e-value: 370.0
score: 8.2
coord: 192..221
e-value: 85.0
score: 12.0
coord: 93..122
e-value: 0.27
score: 20.3
coord: 126..156
e-value: 0.085
score: 22.0
coord: 21..50
e-value: 110.0
score: 11.7
coord: 225..252
e-value: 66.0
score: 12.4
coord: 60..89
e-value: 0.17
score: 21.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 225..252
score: 10.953
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 60..92
score: 8.95
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 126..158
score: 9.831
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 93..125
score: 11.674
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 100..177
e-value: 1.0E-17
score: 66.2
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..99
e-value: 2.9E-16
score: 61.2
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 178..252
e-value: 2.5E-14
score: 55.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 18..246
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 76..154
e-value: 1.6E-9
score: 38.2
coord: 164..246
e-value: 1.9E-8
score: 34.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 21..252
score: 50.136
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 133..250
coord: 24..156
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 91..192
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 91..192
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 133..250
coord: 24..156
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..252
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72842contigH-elongata_contig72842:799..1900 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72842.14965.1mRNA_H-elongata_contig72842.14965.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig72842 787..1900 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig72842.14965.1 ID=prot_H-elongata_contig72842.14965.1|Name=mRNA_H-elongata_contig72842.14965.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=252bp
MNVLAAGAAIAVLRDRNPNPNGSTLLHAVACGGNVRILTALVAVDCGCED
DIDVQESQFPNSTPLLCAIWYGHRNMTEALIAAGADPRKADARSQTALHL
ASIRGHCSILSDLLKMGLDIEARNDQEYTPLACAVASGKVNALKLLLDAG
ASTQTRTASMLRVLDIAVKEGRIRCLRVLLAARVNPEEIDQVGLTALLAA
TRTSNIAAIAALIDAGADMEGRGGTMWTPLHFACQQGDVSVIDALIVRGG
NV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom