prot_H-elongata_contig72832.14964.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig72832.14964.1
Unique Name	prot_H-elongata_contig72832.14964.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	395

Homology

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BLAST of mRNA_H-elongata_contig72832.14964.1 vs. uniprot
Match: D8LKE1_ECTSI (Similar to retinitis pigmentosa GTPase regulator n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKE1_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 5.630e-52
Identity = 89/118 (75.42%), Postives = 102/118 (86.44%), Query Frame = 0

Query:  275 EYVAKVFSYCRHGRLDQVGREMGAGIDVCGQRDENGNTLLHCAAQNGLRSMCKAVLQDVGSRPLNLKNNRGNTALHYAYGFGFHQLGKYLAMNGADDTLVNDQGLTCYEGLDRHDFDS 392
            EYVAKVFSYCRHGRL +V   +G+G DVC +RDENGNTLLHCAAQNGLR MCK+VLQ+   +PLN+KNNRGNTALHYA+ FGF QLGKYLA  GADD+L+NDQGLTCYEGL+R D +S
Sbjct:  865 EYVAKVFSYCRHGRLAEVQEALGSGFDVCRRRDENGNTLLHCAAQNGLRGMCKSVLQEGRGQPLNVKNNRGNTALHYAFAFGFQQLGKYLASKGADDSLLNDQGLTCYEGLERQDLES 982

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BLAST of mRNA_H-elongata_contig72832.14964.1 vs. uniprot
Match: A0A7S2SVF6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVF6_9STRA)

HSP 1 Score: 103 bits (256), Expect = 8.020e-23
Identity = 53/114 (46.49%), Postives = 72/114 (63.16%), Query Frame = 0

Query:  275 EYVAKVFSYCRHGRLDQVGREMGAGIDVCGQRDENGNTLLHCAAQNGLRSMCKAVLQDVGSRPLNLKNNRGNTALHYAYGFGFHQLGKYLAMNGADDTLVNDQGLTCYEGLDRH 388
            EY ++VFS+CRH RL +V   +  G  +  ++DENGNTLL  AAQNGLR   K  L+      +NL+N RGNT LHY + +G   L  YL   GADD+++N  GL+ YEG  ++
Sbjct:   26 EYRSQVFSFCRHKRLREVEAALDNGFPI-DEQDENGNTLLFVAAQNGLRQAAKLCLRR--GAHVNLQNLRGNTPLHYCFAYGHSGLAAYLIEKGADDSILNSDGLSVYEGTAKN 136

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BLAST of mRNA_H-elongata_contig72832.14964.1 vs. uniprot
Match: A0A7R9T857_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9T857_MICPS)

HSP 1 Score: 98.6 bits (244), Expect = 1.770e-20
Identity = 52/119 (43.70%), Postives = 70/119 (58.82%), Query Frame = 0

Query:  275 EYVAKVFSYCRHGRLDQVGREMGAGIDVCGQRDENGNTLLHCAAQNGLRSMCKAVLQ--DVGSRP-----LNLKNNRGNTALHYAYGFGFHQLGKYLAMNGADDTLVNDQGLTCYEGLD 386
            E + + FS  RHGR+  +     +G+D    RD NG TLLH AAQN  R   K VL+  D  + P     ++ +  +G+TALHY + +G+  LG YL   GADDT+ N  G+TCYEGLD
Sbjct:   20 EDLVEAFSKARHGRVKDLAELFKSGVDPAA-RDINGLTLLHMAAQNNQRKATKLVLKHTDFATNPPRLDLIDAQTKQGHTALHYCFAYGYQDLGNYLLSLGADDTITNVHGMTCYEGLD 137

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BLAST of mRNA_H-elongata_contig72832.14964.1 vs. uniprot
Match: A0A7S1C915_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C915_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.310e-20
Identity = 52/117 (44.44%), Postives = 72/117 (61.54%), Query Frame = 0

Query:  271 SNSPEYVAKVFSYCRHGRLDQVGREMGAGIDVCGQRDENGNTLLHCAAQNGLRSMCKAVLQDVGSRPLNLKNNRGNTALHYAYGFGFHQ-LGKYLAMNGADDTLVNDQGLTCYEGLD 386
            S S + VA VFS  RH R  +V   +  G+ V   RD++GNT+L  A QNGL+ M K  L+      +N +N +GNT LHY + +G+   LG+Y+   GAD TL ND GLTC++GL+
Sbjct:   21 SLSEKEVADVFSLARHNRCKEVEALLDRGVPV-NLRDKHGNTILTIACQNGLKKMAKVALR--AGADINTRNYKGNTPLHYCFTYGWGDTLGQYMLSKGADGTLRNDLGLTCFQGLE 134

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BLAST of mRNA_H-elongata_contig72832.14964.1 vs. uniprot
Match: A0A7S3XZ48_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ48_HETAK)

HSP 1 Score: 94.0 bits (232), Expect = 1.080e-19
Identity = 49/107 (45.79%), Postives = 69/107 (64.49%), Query Frame = 0

Query:  280 VFSYCRHGRLDQVGREMGAGIDVCGQRDENGNTLLHCAAQNGLRSMCKAVLQDVGSRPLNLKNNRGNTALHYAYGFGFHQ-LGKYLAMNGADDTLVNDQGLTCYEGL 385
            VFSY RH R+D + R + AG+ V   RD+ GNT+L  A QNG +   KA L+      +N +N RGNT LH+ + +G+ + LG+YL   GAD T+ N+ G+TCYEG+
Sbjct:   19 VFSYARHNRVDDLERLLDAGMPV-NIRDQYGNTVLCVACQNGHKRAAKAALRR--GADINARNYRGNTPLHFCFTYGYGETLGQYLISKGADPTIRNNDGVTCYEGI 122

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BLAST of mRNA_H-elongata_contig72832.14964.1 vs. uniprot
Match: A0A2D4BHZ8_PYTIN (Proteasome subunit alpha, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHZ8_PYTIN)

HSP 1 Score: 99.0 bits (245), Expect = 4.160e-19
Identity = 50/108 (46.30%), Postives = 69/108 (63.89%), Query Frame = 0

Query:  280 VFSYCRHGRLDQVGREMGAGIDVCGQRDENGNTLLHCAAQNGLRSMCKAVLQDVGSRPLNLKNNRGNTALHYAYGFGFHQ-LGKYLAMNGADDTLVNDQGLTCYEGLD 386
            VFS  RH R+D V   +  G+ V   RD +GNT+L  A QNGL+ M K  L+   +  +N +NNRGNTALH+ + +G+   LG+YL   GAD T+ ND GL C++G+D
Sbjct:  319 VFSAARHNRVDSVAYMLDQGVSV-NARDAHGNTILSIACQNGLKRMAKLALRRGAN--INSQNNRGNTALHFCFAYGYGDTLGEYLLSKGADATIANDAGLLCFDGID 423

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BLAST of mRNA_H-elongata_contig72832.14964.1 vs. uniprot
Match: A0A7S0Y9L9_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y9L9_HEMAN)

HSP 1 Score: 95.1 bits (235), Expect = 5.030e-19
Identity = 50/106 (47.17%), Postives = 69/106 (65.09%), Query Frame = 0

Query:  280 VFSYCRHGRLDQVGREMGAGIDVCGQRDENGNTLLHCAAQNGLRSMCKAVLQDVGSRPLNLKNNRGNTALHYAYGFGFHQLGKYLAMNGADDTLVNDQGLTCYEGL 385
             FS  RHG+ +++   + AG  V   +D  GNTLL+ AAQNG +S+ K +L+  G+  LN +N++G T LH+ + +GF  LG YL   GADDT+ N  GLTCYEGL
Sbjct:  121 AFSKVRHGKRNEIISLLDAGCPV-DLKDPAGNTLLNVAAQNGHKSIIKMLLRRGGA--LNTQNHKGQTPLHFCFTYGFTDLGNYLVTKGADDTVQNFAGLTCYEGL 223

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BLAST of mRNA_H-elongata_contig72832.14964.1 vs. uniprot
Match: C1MNN4_MICPC (Formin-like protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MNN4_MICPC)

HSP 1 Score: 98.6 bits (244), Expect = 1.900e-18
Identity = 52/119 (43.70%), Postives = 70/119 (58.82%), Query Frame = 0

Query:  275 EYVAKVFSYCRHGRLDQVGREMGAGIDVCGQRDENGNTLLHCAAQNGLRSMCKAVLQ--DVGSRP-----LNLKNNRGNTALHYAYGFGFHQLGKYLAMNGADDTLVNDQGLTCYEGLD 386
            E + + FS  RHGR+  +     +G+D    RD NG TLLH AAQN  R   K VL+  D  + P     ++ +  +G+TALHY + +G+  LG YL   GADDT+ N  G+TCYEGLD
Sbjct:  484 EDLVEAFSKARHGRVKDLAELFKSGVDPAA-RDINGLTLLHMAAQNNQRKATKLVLKHTDFATNPPRLDLIDAQTKQGHTALHYCFAYGYQDLGNYLLSLGADDTITNVHGMTCYEGLD 601

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BLAST of mRNA_H-elongata_contig72832.14964.1 vs. uniprot
Match: G4Z035_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z035_PHYSP)

HSP 1 Score: 92.8 bits (229), Expect = 2.700e-18
Identity = 49/107 (45.79%), Postives = 65/107 (60.75%), Query Frame = 0

Query:  280 VFSYCRHGRLDQVGREMGAGIDVCGQRDENGNTLLHCAAQNGLRSMCKAVLQDVGSRPLNLKNNRGNTALHYAYGFGF-HQLGKYLAMNGADDTLVNDQGLTCYEGL 385
            +FS  RH R D V   +  G+ V   RD+ GNTLL  A QNGL+ + K  L+   +  +N +NNRGNTALH+ + +G+   LG YL   GAD T+ ND GL CY G+
Sbjct:  104 LFSAARHNRYDSVVYMLDQGVPV-NSRDQFGNTLLSIACQNGLKRIAKLALRRGAN--INSQNNRGNTALHFCFSYGYGDSLGAYLISKGADTTIENDDGLVCYYGI 207

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BLAST of mRNA_H-elongata_contig72832.14964.1 vs. uniprot
Match: A0A7S0CZV0_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0CZV0_MICPS)

HSP 1 Score: 97.8 bits (242), Expect = 3.260e-18
Identity = 55/123 (44.72%), Postives = 71/123 (57.72%), Query Frame = 0

Query:  271 SNSPEYVAKVFSYCRHGRLDQVGREMGAGIDVCGQRDENGNTLLHCAAQNGLRSMCKAVLQ------DVGSRPL-NLKNNRGNTALHYAYGFGFHQLGKYLAMNGADDTLVNDQGLTCYEGLD 386
            S   E + + FS  RHGR  ++      G+D    RD NG TLLH AAQN  R   K VL+      D  SR + N + N G TALH+A+ +G+H L ++L   GADD +VN  GL+CYEGLD
Sbjct:  411 SGGGEDLVEAFSRSRHGRAKELDALFSRGVDPHA-RDANGLTLLHIAAQNNQRKTAKLVLKRTDFARDPPSRDMMNQQTNAGQTALHFAFAYGYHDLARWLVSLGADDGIVNVHGLSCYEGLD 532

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig72832.14964.1 vs. uniprot

BLAST of mRNA_H-elongata_contig72832.14964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LKE1_ECTSI	5.630e-52	75.42	Similar to retinitis pigmentosa GTPase regulator n...	[more]
A0A7S2SVF6_9STRA	8.020e-23	46.49	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7R9T857_MICPS	1.770e-20	43.70	Hypothetical protein (Fragment) n=1 Tax=Micromonas...	[more]
A0A7S1C915_9STRA	2.310e-20	44.44	Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20...	[more]
A0A7S3XZ48_HETAK	1.080e-19	45.79	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A2D4BHZ8_PYTIN	4.160e-19	46.30	Proteasome subunit alpha, putative n=1 Tax=Pythium...	[more]
A0A7S0Y9L9_HEMAN	5.030e-19	47.17	Hypothetical protein n=2 Tax=Hemiselmis andersenii...	[more]
C1MNN4_MICPC	1.900e-18	43.70	Formin-like protein n=1 Tax=Micromonas pusilla (st...	[more]
G4Z035_PHYSP	2.700e-18	45.79	Uncharacterized protein n=4 Tax=Phytophthora TaxID...	[more]
A0A7S0CZV0_MICPS	3.260e-18	44.72	Hypothetical protein n=1 Tax=Micromonas pusilla Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 344..373 e-value: 160.0 score: 10.9 coord: 309..340 e-value: 2.4 score: 17.2
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 344..376 score: 9.297
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 253..392 e-value: 3.7E-16 score: 61.1
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 282..382
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 302..372 e-value: 1.1E-8 score: 35.5
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 309..380 score: 13.283
None	No IPR available	PANTHER	PTHR24119	FAMILY NOT NAMED	coord: 275..385
None	No IPR available	PANTHER	PTHR24119:SF3		coord: 275..385
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..4
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..22
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..394
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 5..16

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig72832	contig	H-elongata_contig72832:750..2753 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig72832.14964.1	mRNA_H-elongata_contig72832.14964.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig72832 627..3123 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig72832.14964.1 ID=prot_H-elongata_contig72832.14964.1|Name=mRNA_H-elongata_contig72832.14964.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=395bp
MVDEVAAAAANAAAAAAAAAVAATSTSGNRYTCRRNGDSGRGGCRRGCEL
ANKAKAKESAVVGERSEKGGGAGSLGERAVASVPPQYQQPQSKPPESSPE
TAELPLTEASPTHPSFVALDGSRATENGDGGGIAVAAERGSCSSGSSVNG
ARSSPSSPTPCRSVPSPDERGQHPEVASPHVLGVAAEGFATATDATSEPR
VVVPPAGMEGIDGRRRQDRGFSGGRQQRDVGGGIHIEGTIVGSREEKIRP
GSSAGGEGGGSGQLGGGRERSNSPEYVAKVFSYCRHGRLDQVGREMGAGI
DVCGQRDENGNTLLHCAAQNGLRSMCKAVLQDVGSRPLNLKNNRGNTALH
YAYGFGFHQLGKYLAMNGADDTLVNDQGLTCYEGLDRHDFDSSL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR036770	Ankyrin_rpt-contain_sf
IPR020683	Ankyrin_rpt-contain_dom