prot_H-elongata_contig72709.14944.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig72709.14944.1
Unique Nameprot_H-elongata_contig72709.14944.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length80
Homology
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BLAST of mRNA_H-elongata_contig72709.14944.1 vs. uniprot
Match: A0A6H5JNM9_9PHAE (TauD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM9_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 3.620e-11
Identity = 35/66 (53.03%), Postives = 44/66 (66.67%), Query Frame = 0 
Query:   14 STTRVDWLRRHCTSSTARDLRRRYGATAAGVACQPTRRVFWGADVFAA---ENNSP--CLEYDQIV 74
            ST  +DWLRRHCTS+TARDLRRR+G  A G    P R V WGADVF+A   +   P  C+ Y+ ++
Sbjct:   93 STIPIDWLRRHCTSATARDLRRRHGGPADGPGLHP-RPVLWGADVFSAGTPQQQQPPACMSYEDVM 157
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72709.14944.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JNM9_9PHAE3.620e-1153.03TauD domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72709contigH-elongata_contig72709:1243..1482 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72709.14944.1mRNA_H-elongata_contig72709.14944.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig72709 1243..1483 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig72709.14944.1 ID=prot_H-elongata_contig72709.14944.1|Name=mRNA_H-elongata_contig72709.14944.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp
LRWSADPTQPNQESTTRVDWLRRHCTSSTARDLRRRYGATAAGVACQPTR
RVFWGADVFAAENNSPCLEYDQIVDACQSQ
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