prot_H-elongata_contig72689.14940.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig72689.14940.1
Unique Nameprot_H-elongata_contig72689.14940.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length36
Homology
BLAST of mRNA_H-elongata_contig72689.14940.1 vs. uniprot
Match: A0A6H5JAP6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAP6_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 3.760e-15
Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 0
Query:    1 MSRLQETSVLEGHTERVWCVAWSPDGKLLASCSSDK 36
            MSRL+ET+ LEGHTERVWCVAWSPDG+LLASCSSDK
Sbjct:    1 MSRLRETAALEGHTERVWCVAWSPDGRLLASCSSDK 36          
BLAST of mRNA_H-elongata_contig72689.14940.1 vs. uniprot
Match: D7FXR6_ECTSI (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR6_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 6.530e-15
Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 0
Query:    1 MSRLQETSVLEGHTERVWCVAWSPDGKLLASCSSDK 36
            MSRL+ET+ LEGHTERVWCVAWSPDG+LLASCSSDK
Sbjct:    1 MSRLRETAALEGHTERVWCVAWSPDGRLLASCSSDK 36          
BLAST of mRNA_H-elongata_contig72689.14940.1 vs. uniprot
Match: A0A5J4YI89_9CHLO (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4YI89_9CHLO)

HSP 1 Score: 60.1 bits (144), Expect = 1.410e-9
Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 MSRLQETSVLEGHTERVWCVAWSPDGKLLASCSSDK 36
            M+RL++T VLEGHT+RVW VAWSP G  +ASCS DK
Sbjct:    1 MARLEQTQVLEGHTDRVWNVAWSPKGDSIASCSGDK 36          
BLAST of mRNA_H-elongata_contig72689.14940.1 vs. uniprot
Match: A0A835YYV2_9STRA (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYV2_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.520e-9
Identity = 26/36 (72.22%), Postives = 29/36 (80.56%), Query Frame = 0
Query:    1 MSRLQETSVLEGHTERVWCVAWSPDGKLLASCSSDK 36
            M++L   + LEGH ER W VAWSPDGKLLASCSSDK
Sbjct:    1 MAKLSLLATLEGHEERAWFVAWSPDGKLLASCSSDK 36          
BLAST of mRNA_H-elongata_contig72689.14940.1 vs. uniprot
Match: V3ZFT4_LOTGI (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZFT4_LOTGI)

HSP 1 Score: 58.2 bits (139), Expect = 7.210e-9
Identity = 24/36 (66.67%), Postives = 26/36 (72.22%), Query Frame = 0
Query:    1 MSRLQETSVLEGHTERVWCVAWSPDGKLLASCSSDK 36
            M RL+E +   GH E VWCVAWSP G LLASCS DK
Sbjct:    1 MFRLEEITTFTGHNEAVWCVAWSPSGSLLASCSGDK 36          
BLAST of mRNA_H-elongata_contig72689.14940.1 vs. uniprot
Match: A0A0B7APJ6_9EUPU (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7APJ6_9EUPU)

HSP 1 Score: 58.2 bits (139), Expect = 7.240e-9
Identity = 23/36 (63.89%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    1 MSRLQETSVLEGHTERVWCVAWSPDGKLLASCSSDK 36
            M  L+E   L GHT+RVWCV+WSP+G LLASC  DK
Sbjct:    1 MQTLKEYQTLNGHTDRVWCVSWSPNGSLLASCGGDK 36          
BLAST of mRNA_H-elongata_contig72689.14940.1 vs. uniprot
Match: A0A2V0PR28_9CHLO (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PR28_9CHLO)

HSP 1 Score: 58.2 bits (139), Expect = 7.540e-9
Identity = 24/33 (72.73%), Postives = 26/33 (78.79%), Query Frame = 0
Query:    4 LQETSVLEGHTERVWCVAWSPDGKLLASCSSDK 36
            L+    LEGH ERVWCVAWSPDG  LASCS+DK
Sbjct:    9 LELLQTLEGHDERVWCVAWSPDGSTLASCSADK 41          
BLAST of mRNA_H-elongata_contig72689.14940.1 vs. uniprot
Match: A0A699ZUP8_HAELA (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699ZUP8_HAELA)

HSP 1 Score: 57.8 bits (138), Expect = 8.070e-9
Identity = 24/33 (72.73%), Postives = 27/33 (81.82%), Query Frame = 0
Query:    4 LQETSVLEGHTERVWCVAWSPDGKLLASCSSDK 36
            +QE  VLEGHT+RVW VAWSP G+ LASCS DK
Sbjct:    1 MQELQVLEGHTDRVWAVAWSPSGENLASCSGDK 33          
BLAST of mRNA_H-elongata_contig72689.14940.1 vs. uniprot
Match: J9ESC0_9SPIT (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9ESC0_9SPIT)

HSP 1 Score: 57.8 bits (138), Expect = 1.030e-8
Identity = 22/33 (66.67%), Postives = 27/33 (81.82%), Query Frame = 0
Query:    4 LQETSVLEGHTERVWCVAWSPDGKLLASCSSDK 36
            LQE S LE H +R+WC+AW+P G L+ASCSSDK
Sbjct:  731 LQELSTLEAHDDRIWCLAWNPQGSLIASCSSDK 763          
BLAST of mRNA_H-elongata_contig72689.14940.1 vs. uniprot
Match: A0A6P7SB17_OCTVU (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=2 Tax=Octopus TaxID=6643 RepID=A0A6P7SB17_OCTVU)

HSP 1 Score: 57.0 bits (136), Expect = 1.870e-8
Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0
Query:    4 LQETSVLEGHTERVWCVAWSPDGKLLASCSSDK 36
            +QET+ L GH E+VWCVAW PDG+LLAS  SDK
Sbjct:    5 MQETTSLSGHEEQVWCVAWDPDGRLLASSGSDK 37          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72689.14940.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAP6_9PHAE3.760e-1588.89Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FXR6_ECTSI6.530e-1588.89Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A5J4YI89_9CHLO1.410e-969.44Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A835YYV2_9STRA1.520e-972.22Probable cytosolic iron-sulfur protein assembly pr... [more]
V3ZFT4_LOTGI7.210e-966.67Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A0B7APJ6_9EUPU7.240e-963.89Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A2V0PR28_9CHLO7.540e-972.73Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A699ZUP8_HAELA8.070e-972.73Probable cytosolic iron-sulfur protein assembly pr... [more]
J9ESC0_9SPIT1.030e-866.67Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A6P7SB17_OCTVU1.870e-869.70Probable cytosolic iron-sulfur protein assembly pr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 3..36
e-value: 1.8E-4
score: 30.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 5..36
e-value: 1.3E-8
score: 35.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 10..36
score: 11.712
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..36
e-value: 5.8E-13
score: 50.7
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 10..36
score: 11.102
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 6..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72689contigH-elongata_contig72689:2743..2850 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72689.14940.1mRNA_H-elongata_contig72689.14940.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig72689 2743..2850 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig72689.14940.1 ID=prot_H-elongata_contig72689.14940.1|Name=mRNA_H-elongata_contig72689.14940.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=36bp
MSRLQETSVLEGHTERVWCVAWSPDGKLLASCSSDK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf