prot_H-elongata_contig72655.14935.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig72655.14935.1
Unique Nameprot_H-elongata_contig72655.14935.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
BLAST of mRNA_H-elongata_contig72655.14935.1 vs. uniprot
Match: D7G1F5_ECTSI (Amino acid/polyamine transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1F5_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 6.180e-26
Identity = 51/62 (82.26%), Postives = 58/62 (93.55%), Query Frame = 0
Query:    1 QVVGATGSTTITFILPGLLYLKVHPDPHPKRSLAALQLAVGVLIIPVALTFIALGDSAERRR 62
            +VVGATGSTT+ F+LPGLLYLK+HP+PHPKRSLA LQLAVG+LIIPVALTFIALG SAE +R
Sbjct:  679 EVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALGHSAEGQR 740          
BLAST of mRNA_H-elongata_contig72655.14935.1 vs. uniprot
Match: A0A7S2WEX7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEX7_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.040e-12
Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    2 VVGATGSTTITFILPGLLYLKVHPDPHPKRSLAALQLAVGVLIIPVALTFIALGDS 57
            +VGATGSTT+++ILPG+ Y K+ P+PH KR LA  QL  G+ I+P ALT IA+ +S
Sbjct:  343 IVGATGSTTVSYILPGICYFKMFPEPHLKRWLALGQLCAGLFIMPAALTLIAIENS 398          
BLAST of mRNA_H-elongata_contig72655.14935.1 vs. uniprot
Match: A0A7S2BAD5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BAD5_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.730e-12
Identity = 29/51 (56.86%), Postives = 42/51 (82.35%), Query Frame = 0
Query:    2 VVGATGSTTITFILPGLLYLKVHPDPHPKRSLAALQLAVGVLIIPVALTFI 52
            +VGATGST ++++LPGL Y ++ P+PH KR+LA +Q  +G +IIP+ALTFI
Sbjct:  204 IVGATGSTMVSYVLPGLCYFRLFPEPHIKRNLALVQFGLGCVIIPLALTFI 254          
BLAST of mRNA_H-elongata_contig72655.14935.1 vs. uniprot
Match: A0A7S1FBP7_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FBP7_NOCSC)

HSP 1 Score: 65.1 bits (157), Expect = 4.110e-11
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    2 VVGATGSTTITFILPGLLYLKVHPDPHPKRSLAALQLAVGVLI 44
            VVGATGSTT+T+ILPGLLY++ H  PH KRSLA LQL+ G +I
Sbjct:  201 VVGATGSTTVTYILPGLLYMRSHKRPHLKRSLAMLQLSAGCII 243          
BLAST of mRNA_H-elongata_contig72655.14935.1 vs. uniprot
Match: A0A7S0ZVR7_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZVR7_NOCSC)

HSP 1 Score: 64.3 bits (155), Expect = 1.650e-10
Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 0
Query:    2 VVGATGSTTITFILPGLLYLKVHPDPHPKRSLAALQLAVGVLIIPVALT 50
            +VGATGSTT+T+ILPGLLYL+ H   H KR  A LQL  G +I+P+ LT
Sbjct:  393 IVGATGSTTVTYILPGLLYLRSHRHSHWKRRFAMLQLFAGCIIMPLCLT 441          
BLAST of mRNA_H-elongata_contig72655.14935.1 vs. uniprot
Match: A0A7S1TS32_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TS32_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 4.250e-10
Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    2 VVGATGSTTITFILPGLLYLKVHPDPHPKRSLAALQLAVGVLIIPVALTFIAL 54
            +VGA GSTT++F+LPG +Y ++HP PH KR  AA    +G +I+P+AL FI L
Sbjct:  466 IVGAVGSTTVSFLLPGAVYFRLHPWPHWKRYGAAFVFCIGCIIMPLALVFIFL 518          
BLAST of mRNA_H-elongata_contig72655.14935.1 vs. uniprot
Match: A0A835YKE8_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKE8_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 5.130e-9
Identity = 32/64 (50.00%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    1 QVVGATGSTTITFILPGLLYLKVHPDP---HPKRSLAALQLAVGVLIIPVALTFIALGDSAERR 61
            +VVGATGST I++ILPG +YL +HP      P R  AA+QLA G +I+PV L F+  G     R
Sbjct:  364 EVVGATGSTIISYILPGGIYLALHPPTDKVQPLRVAAAVQLATGCVIMPVCLFFVIEGAVTSYR 427          
BLAST of mRNA_H-elongata_contig72655.14935.1 vs. uniprot
Match: A0A7S1WY18_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WY18_ALECA)

HSP 1 Score: 59.7 bits (143), Expect = 7.080e-9
Identity = 29/53 (54.72%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    2 VVGATGSTTITFILPGLLYLKVHPDPHPKRSLAALQLAVGVLIIPVALTFIAL 54
            VVGATGSTT+++ILPGL+Y    PD   KR LA +QL +G +I+P  L  I L
Sbjct:  464 VVGATGSTTVSYILPGLMYATAFPDGGIKRKLAFVQLGLGCIIMPTCLILIFL 516          
BLAST of mRNA_H-elongata_contig72655.14935.1 vs. uniprot
Match: A0A8J5XBN8_DIALT (Aa_trans domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XBN8_DIALT)

HSP 1 Score: 58.9 bits (141), Expect = 1.330e-8
Identity = 30/58 (51.72%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    2 VVGATGSTTITFILPGLLYLKVHPDPHPKRSLAALQLAVGVLIIPVALTFIAL--GDS 57
            VVGATGST +++ILPG +Y  +HP PH  R  A    A GV I PV+L  I    GDS
Sbjct:  510 VVGATGSTAVSYILPGAIYWVLHPHPHAMRFAAGAMFAAGVCITPVSLAAILTSHGDS 567          
BLAST of mRNA_H-elongata_contig72655.14935.1 vs. uniprot
Match: A0A8J5X8H2_DIALT (Aa_trans domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X8H2_DIALT)

HSP 1 Score: 58.5 bits (140), Expect = 1.810e-8
Identity = 26/48 (54.17%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    2 VVGATGSTTITFILPGLLYLKVHPDPHPKRSLAALQLAVGVLIIPVAL 49
            VVGATGSTT+++ILPG  Y ++HP PH KR +A      G+ +IP AL
Sbjct:  418 VVGATGSTTVSYILPGACYWRLHPFPHAKRYVAGGMFLTGLALIPTAL 465          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72655.14935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1F5_ECTSI6.180e-2682.26Amino acid/polyamine transporter n=2 Tax=Ectocarpu... [more]
A0A7S2WEX7_9STRA1.040e-1257.14Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2BAD5_9STRA1.730e-1256.86Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1FBP7_NOCSC4.110e-1169.77Hypothetical protein (Fragment) n=1 Tax=Noctiluca ... [more]
A0A7S0ZVR7_NOCSC1.650e-1061.22Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A7S1TS32_9STRA4.250e-1052.83Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A835YKE8_9STRA5.130e-950.00Transmembrane amino acid transporter protein-domai... [more]
A0A7S1WY18_ALECA7.080e-954.72Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A8J5XBN8_DIALT1.330e-851.72Aa_trans domain-containing protein n=1 Tax=Diacron... [more]
A0A8J5X8H2_DIALT1.810e-854.17Aa_trans domain-containing protein n=2 Tax=Diacron... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013057Amino acid transporter, transmembrane domainPFAMPF01490Aa_transcoord: 2..52
e-value: 3.4E-6
score: 26.0
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 55..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..33
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..54
NoneNo IPR availableTMHMMTMhelixcoord: 33..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72655contigH-elongata_contig72655:2654..2842 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72655.14935.1mRNA_H-elongata_contig72655.14935.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig72655 2654..2842 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig72655.14935.1 ID=prot_H-elongata_contig72655.14935.1|Name=mRNA_H-elongata_contig72655.14935.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
QVVGATGSTTITFILPGLLYLKVHPDPHPKRSLAALQLAVGVLIIPVALT
FIALGDSAERRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013057AA_transpt_TM