prot_H-elongata_contig72593.14928.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig72593.14928.1
Unique Nameprot_H-elongata_contig72593.14928.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length115
Homology
BLAST of mRNA_H-elongata_contig72593.14928.1 vs. uniprot
Match: UPI00103FEA55 (uncharacterized protein LOC114361313 n=2 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103FEA55)

HSP 1 Score: 53.1 bits (126), Expect = 8.830e-6
Identity = 31/105 (29.52%), Postives = 53/105 (50.48%), Query Frame = 0
Query:    9 EAWSKLVQHYRASGLKERRRLTVDFYTMKMDLGEHPREFLLQVDQMVKELERVERPVDSKDVDIVILSGLTPQYDAEVRMLESSSDWPTREWIERAVINQYERLE 113
            EAW+ L + Y   GL  R  L    +  K+        +L ++ ++  +L  +E P+D + V ++ILSGLT  YD  +  +E SS   + E I   ++ + +R E
Sbjct:   79 EAWTILQKTYEGRGLSRRLGLLRSLFNTKLSECSSMEVYLNKIKEISHQLSEIESPLDDELVAVIILSGLTDDYDPLIMAIEHSSSKLSTEVISTKLLQETQRRE 183          
BLAST of mRNA_H-elongata_contig72593.14928.1 vs. uniprot
Match: UPI001F8D56D1 (Uncharacterized protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=UPI001F8D56D1)

HSP 1 Score: 52.4 bits (124), Expect = 1.810e-5
Identity = 28/105 (26.67%), Postives = 53/105 (50.48%), Query Frame = 0
Query:    9 EAWSKLVQHYRASGLKERRRLTVDFYTMKMDLGEHPREFLLQVDQMVKELERVERPVDSKDVDIVILSGLTPQYDAEVRMLESSSDWPTREWIERAVINQYERLE 113
            EAW+ L + Y   GL  +  L    +  K+        +L ++ ++  +L  +E P+D + + ++ILSGLT  YD  +  +E+S    T E +   ++ + +R E
Sbjct:   77 EAWNNLKKTYEGKGLCRKLGLLRSLFGTKLADSNSMDGYLNKIKEVAHQLSEIESPLDDEFIAVIILSGLTSDYDPLIMAIENSGQKLTTEHVSAKLLQETQRRE 181          
BLAST of mRNA_H-elongata_contig72593.14928.1 vs. uniprot
Match: A0A2H1WMK4_SPOFR (SFRICE_021333 n=1 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A2H1WMK4_SPOFR)

HSP 1 Score: 51.6 bits (122), Expect = 2.840e-5
Identity = 28/105 (26.67%), Postives = 53/105 (50.48%), Query Frame = 0
Query:    9 EAWSKLVQHYRASGLKERRRLTVDFYTMKMDLGEHPREFLLQVDQMVKELERVERPVDSKDVDIVILSGLTPQYDAEVRMLESSSDWPTREWIERAVINQYERLE 113
            EAW  L + Y   GL  R  L    +  K+        +L ++ ++  +L  +E P+D + V +++LSGLT  YD  +  +E S+   + E I + ++ + ++ E
Sbjct:   82 EAWKILQKAYEGRGLSRRLGLLRSLFNTKLSENSSMEVYLNKIKEISHQLNEIESPLDDEFVAVIMLSGLTDDYDPLIMAIEHSTSKLSTEIISQKLLQETQKRE 186          
BLAST of mRNA_H-elongata_contig72593.14928.1 vs. uniprot
Match: UPI00103F0D66 (uncharacterized protein LOC114362197 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103F0D66)

HSP 1 Score: 49.3 bits (116), Expect = 9.420e-5
Identity = 27/85 (31.76%), Postives = 44/85 (51.76%), Query Frame = 0
Query:    9 EAWSKLVQHYRASGLKERRRLTVDFYTMKMDLGEHPREFLLQVDQMVKELERVERPVDSKDVDIVILSGLTPQYDAEVRMLESSS 93
            EAW+ L + Y   GL  R  L    +  K+        +L ++ ++  +L  +E P+D + V ++ILSGLT  YD  +  +E SS
Sbjct:   79 EAWTILQKTYEGRGLSRRLGLLRSLFNTKLSECSSMEVYLNKIKEISHQLSEIESPLDDELVAVIILSGLTDDYDPLIMAIEHSS 163          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72593.14928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
UPI00103FEA558.830e-629.52uncharacterized protein LOC114361313 n=2 Tax=Ostri... [more]
UPI001F8D56D11.810e-526.67Uncharacterized protein n=1 Tax=Spodoptera exigua ... [more]
A0A2H1WMK4_SPOFR2.840e-526.67SFRICE_021333 n=1 Tax=Spodoptera frugiperda TaxID=... [more]
UPI00103F0D669.420e-531.76uncharacterized protein LOC114362197 n=1 Tax=Ostri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 8..114
e-value: 2.3E-15
score: 56.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72593contigH-elongata_contig72593:2765..3109 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72593.14928.1mRNA_H-elongata_contig72593.14928.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig72593 2753..3109 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig72593.14928.1 ID=prot_H-elongata_contig72593.14928.1|Name=mRNA_H-elongata_contig72593.14928.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bp
MYYINIFKEAWSKLVQHYRASGLKERRRLTVDFYTMKMDLGEHPREFLLQ
VDQMVKELERVERPVDSKDVDIVILSGLTPQYDAEVRMLESSSDWPTREW
IERAVINQYERLESE
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