prot_H-elongata_contig72532.14923.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig72532.14923.1
Unique Name	prot_H-elongata_contig72532.14923.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	80

Homology

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BLAST of mRNA_H-elongata_contig72532.14923.1 vs. uniprot
Match: D8LKG7_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG7_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 7.930e-30
Identity = 57/77 (74.03%), Postives = 66/77 (85.71%), Query Frame = 0

Query:    1 ILRYALKYKPEEIPGGRRWLETLRRIPMPMAVLSRLPSSVVDSVLAETDLAGYFP--HRVTKEDEPFDDYRGYMLVS 75
            ILR ALKY+P E  G RRWLETLRRIPMPMAVLSRLPS++VD+VL +T+L+GYF   HRVT EDEP+DDYRGYML +
Sbjct:  370 ILRQALKYQPTETRGSRRWLETLRRIPMPMAVLSRLPSAIVDAVLEKTELSGYFEDQHRVTAEDEPYDDYRGYMLAA 446

[Close]

BLAST of mRNA_H-elongata_contig72532.14923.1 vs. uniprot
Match: A0A6H5JLE3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLE3_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 1.210e-12
Identity = 40/73 (54.79%), Postives = 50/73 (68.49%), Query Frame = 0

Query:   11 EEIPGGRRWLETLRRIPMPMA------VLSRLPSSVVDSVLAETDLAGYFP--HRVTKEDEPFDDYRGYMLVS 75
            EE+ GG   LE   R  +  A      VLSRLPS++VD+VL +T+L+GYF   HRVT EDEP+DDYRGYML +
Sbjct:  406 EELEGG---LEIYERTILRQALKYQPTVLSRLPSAIVDAVLEKTELSGYFEDQHRVTAEDEPYDDYRGYMLAA 475

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig72532.14923.1 vs. uniprot

BLAST of mRNA_H-elongata_contig72532.14923.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LKG7_ECTSI	7.930e-30	74.03	Haloacid dehalogenase-like hydrolase n=1 Tax=Ectoc...	[more]
A0A6H5JLE3_9PHAE	1.210e-12	54.79	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023214	HAD superfamily	GENE3D	3.40.50.1000		coord: 3..69 e-value: 1.2E-5 score: 27.2
IPR036412	HAD-like superfamily	SUPERFAMILY	56784	HAD-like	coord: 10..64

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig72532	contig	H-elongata_contig72532:396..2647 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig72532.14923.1	mRNA_H-elongata_contig72532.14923.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig72532 396..2647 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig72532.14923.1 ID=prot_H-elongata_contig72532.14923.1|Name=mRNA_H-elongata_contig72532.14923.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp
ILRYALKYKPEEIPGGRRWLETLRRIPMPMAVLSRLPSSVVDSVLAETDL
AGYFPHRVTKEDEPFDDYRGYMLVSQAAI*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023214	HAD_sf
IPR036412	HAD-like_sf