prot_H-elongata_contig72468.14914.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig72468.14914.1
Unique Nameprot_H-elongata_contig72468.14914.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length56
Homology
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BLAST of mRNA_H-elongata_contig72468.14914.1 vs. uniprot
Match: D7G615_ECTSI (Alternative oxidase isoform A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G615_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 5.150e-6
Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 0 
Query:    1 MHKDFKQDAVNPFSIQAKVNEYAESGGTNTPVVASITGGEID 42
            MH++FKQDAVNPFSI A V +YA++G T  P VA I  G+ D
Sbjct:  347 MHQEFKQDAVNPFSIHASVTKYADAGVT-PPTVADIANGDAD 387
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72468.14914.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G615_ECTSI5.150e-659.52Alternative oxidase isoform A n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72468contigH-elongata_contig72468:1416..2109 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72468.14914.1mRNA_H-elongata_contig72468.14914.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig72468 1411..2198 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig72468.14914.1 ID=prot_H-elongata_contig72468.14914.1|Name=mRNA_H-elongata_contig72468.14914.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=56bp
MHKDFKQDAVNPFSIQAKVNEYAESGGTNTPVVASITGGEIDPTGPMVAD
KKEKA*
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