prot_H-elongata_contig72240.14897.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig72240.14897.1
Unique Nameprot_H-elongata_contig72240.14897.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length237
Homology
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BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: D7FRL9_ECTSI (Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL9_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 9.570e-76
Identity = 126/195 (64.62%), Postives = 146/195 (74.87%), Query Frame = 0 
Query:   37 PRSTRCEHKL----CESNGRGGEDLGDVDVDVDDDVTEKGKRVPPQLVQSVLPRPWDVEVVLHGERHIITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKVQSGSSGCFENRADRRADDGAPEGFVLTCSTHPTGPGVKLELSANADMWEAYCKRFDDMETRDLLRQASAGLMRKYRMEHPQDFRREVERQF 227
            PR+ R  H          G GGE+ GD          + G+  PP+   SVL RPWDVEV  HGER +ITV PGDSILEAAEM+GMN+SYECRRG+CISCAA+VQ+GSS  FEN ADR  +DGAP+GFVLTCSTHPTGPGVKL+LSANA+MW+AYC R DD+ T+DLLRQ SA +MRKYR+EHP  FR EVERQF
Sbjct:  149 PRAKRGLHATELGAAADRGGGGEECGDEG--------KGGEGKPPR---SVLERPWDVEVDFHGERRVITVQPGDSILEAAEMSGMNLSYECRRGNCISCAARVQNGSSSHFENSADRIPEDGAPDGFVLTCSTHPTGPGVKLDLSANAEMWDAYCARLDDISTQDLLRQTSAEVMRKYRVEHPDYFREEVERQF 332
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BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: A0A836CQ20_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQ20_9STRA)

HSP 1 Score: 106 bits (265), Expect = 3.610e-25
Identity = 56/155 (36.13%), Postives = 85/155 (54.84%), Query Frame = 0 
Query:   88 WDVEVVLHGERHIITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKVQSGSSGCFENRADRRA-------------DDGAPEGFVLTCSTHPTGPGVKLELSANADMWEA-YCKRFDDMETRDLLRQASAGLMRKYRMEHPQDFRREVERQFE 228
            W+V   LHGE   + + P D+IL+AAE+AG+   Y+CRRG+C++CA + ++ SS        + A             D+   EGF L+C ++P GPG+++EL    + W+  YC R  D  TR    +A A + R Y   +P  F  ++ERQFE
Sbjct:   11 WEVTFELHGEETTVLMRPDDTILQAAELAGLRAPYDCRRGNCLTCAGRFKAASSYNLVTTLRQEAGGAVTLDSDTFLCDEAKDEGFFLSCCSYPVGPGLRVELGVQKEAWQIQYCDRLRDEATRAAALEAVAQVQRGYSERNPDKFVADLERQFE 165
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BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: A0A0M0K3H8_9EUKA (Ferredoxin (2fe-2s) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K3H8_9EUKA)

HSP 1 Score: 82.0 bits (201), Expect = 2.650e-14
Identity = 49/109 (44.95%), Postives = 64/109 (58.72%), Query Frame = 0 
Query:   86 RPWDVEVVLHGE-RHIITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKVQSGSSGCFENRADRR-ADDGAPEGFVLTCSTHPTGPGVKLELSANADMWEA-YCKRF 191
            R WDV +V   E RH ++V    S+L AAE+AG+    +CRRG C+SCAA+V SGS       +D    D+   EG VL CS +P GP ++L+L A  D  E  Y KRF
Sbjct:  423 RVWDVTLVSADEQRHTLSVAENQSVLRAAELAGLLPCSDCRRGRCLSCAARVVSGSKFSLAVDSDTALCDEAHVEGIVLLCSAYPRGPNLELKLDAEGDALEIQYEKRF 531
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BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: A0A7S4F9M2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F9M2_CHRCT)

HSP 1 Score: 75.1 bits (183), Expect = 2.840e-13
Identity = 41/112 (36.61%), Postives = 64/112 (57.14%), Query Frame = 0 
Query:   82 SVLPRPWDVEVVLHGERHIITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKVQSGSSGCFENRADRRADDGAPE-GFVLTCSTHPTGPGVKLELSANADMWEA-YCKRF 191
            +V+ R W V V +  + H++ V  G  +L A E AG+    +CRRG+C+SCAA++ +G+      R +      A E GFVL CS +  G G+++E+    ++WE  Y KRF
Sbjct:   17 AVVKRAWPVTVHIGRQAHVLRVPEGQPVLLALEAAGLLPGSDCRRGNCLSCAARIINGAPFSLRVRDNTALCSEAHESGFVLLCSAYVCGKGLEIEVDMEGEVWELQYSKRF 128
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BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: A0A6V1VDI3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VDI3_HETAK)

HSP 1 Score: 72.4 bits (176), Expect = 3.360e-12
Identity = 38/126 (30.16%), Postives = 67/126 (53.17%), Query Frame = 0 
Query:   75 VPPQLVQSVLP-RPWDVEVVLHGERHIITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKVQSGSSG-CFENRADRRADDGAPEGFVLTCSTHPTGPGVKLELSANADMWEAYCKRFDDMETRD 198
            VP +L   + P + W++E+ L G   ++TV   D +LEAAE    +  + CR G C +C+ ++  G  G  ++       +    +GF ++C TH TGPGVK+EL+    ++E    +++    +D
Sbjct:   36 VPLELEGKLDPSKTWEIELTLDGVTKMVTVSEADCVLEAAEKVFDDPPFSCRNGVCTTCSCRIVEGKEGENYKLAVHGLGETALSQGFTMSCQTHVTGPGVKIELNQYDTVYEMQYGQYEKGTAKD 161
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BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: A0A0G4EXA3_VITBC (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EXA3_VITBC)

HSP 1 Score: 70.5 bits (171), Expect = 7.170e-12
Identity = 37/108 (34.26%), Postives = 58/108 (53.70%), Query Frame = 0 
Query:   86 RPWDVEVVLHGERHIITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKVQSGSSG-CFENRADRRADDGAPEGFVLTCSTHPTGPGVKLELSANADMWEAYCKRFD 192
            R W +E+   G+   + V  G S+LEAAE    +   +CR G C SCA ++  G  G  +    D   +    +G+VLTC T+  GPG+K+EL+ N +++     RF+
Sbjct:   18 RSWTIELNYDGDIETVEVPEGTSVLEAAETVWEDPPCDCRNGVCTSCAGRIVGGKLGEAYVINRDSLEEVTKDKGYVLTCQTYVCGPGLKVELNKNEEVYGMQYGRFE 125
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BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: A0A0G4EFE2_VITBC (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFE2_VITBC)

HSP 1 Score: 71.2 bits (173), Expect = 8.840e-12
Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 0 
Query:   90 VEVVLHGERHIITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKVQSGSSGCFENRADRRADDGAPEGFVLTCSTHPTGPGVKLEL 177
            V+V ++G+ + +TV+PGDSILEAAE AG+ + ++CR G+C+ C AKV SGS    ++      D+    G+ L C   P    V +E+
Sbjct:   68 VKVSINGDTYDVTVNPGDSILEAAEEAGLELPHDCRLGTCLQCTAKVVSGS---VDHGMGTLDDEVTEAGYTLACQATPLSDDVHIEI 152
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BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: A0A7S2BT51_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BT51_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 3.190e-11
Identity = 51/147 (34.69%), Postives = 74/147 (50.34%), Query Frame = 0 
Query:   88 WDVEVVLHGERHIITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKV---QSGSSGCFENRADRRA---DDGAPEGFVLTCSTHPTGPGVKLELSANADMWEA-YCKRFDDMETRDLLRQASAGLMRKYRMEHPQDFRREVERQF 227
            + VE VL     I  +    +IL+  E  G+    ECRRG+C+SC+ K+    + S    +   D      DD   EGF+LTC ++ TGPGV L L    + ++  Y KRF   +   L  +ASA  MR++   +P  F   VE+QF
Sbjct:    5 YKVEFVLPEGSTIGYIRKDQTILDLCEEMGLRPPSECRRGNCLSCSGKLLPESTTSVHTVDETGDCNVFLCDDARREGFLLTCVSYVTGPGVVLHLEQAHEAYKVQYVKRFKKKDVEVLGVEASAQAMREWGERNPAKFIGIVEKQF 151
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BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: A0A4D9D796_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D796_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.330e-10
Identity = 42/123 (34.15%), Postives = 65/123 (52.85%), Query Frame = 0 
Query:   75 VPPQLVQSVLP-RPWDVEVVLHGERHIITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKVQSGSSGCFENRADRRADDGAPEGFVLTCSTHPTGPGVKLELSANADMWEAYCKRFDDMET 196
            VP +L   + P + WDV++   GE  ++TV     ILEAAE    ++   CR G C +CA +V +      E      A+  +  GFVLTC THP GPG+++EL     ++E+   +++   T
Sbjct:   41 VPLELEGQLDPTKTWDVKMTYKGETKVLTVSEDTCILEAAEKE-WDVPCSCRNGICTTCAGRVIANPDSKKEAIHGLSAEQ-SKNGFVLTCQTHPCGPGLEVELGMYDTVYESQYGQYEKKAT 161
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BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Match: A0A7S2YSW2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSW2_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.390e-9
Identity = 48/128 (37.50%), Postives = 68/128 (53.12%), Query Frame = 0 
Query:  101 ITVHPGDSILEAAEM-------AGMNIS--YECRRGSCISCAAKVQSGSSGCFENRADRRADDG---------APEGFVLTCSTHPTGPGVKLELSANADMWE-AYCKRFDDMETRDLLRQASAGLMR 209
            + V+PG++IL A E        +G NI   ++CRRG+C++C+A+  S S+    N  D   D+G         A  G+VLTCS+  TGPGV L L AN  +W+  Y  R +  ET    R A A  +R
Sbjct:  109 VPVYPGETILAALERLASSGGTSGANIPPPFDCRRGNCLTCSAQHTSESAAT--NLIDT-TDNGLSPYVAKTIAERGYVLTCSSTVTGPGVSLTLGANNQLWDYVYRGRLESEETESAARAAMAKAIR 233
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72240.14897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRL9_ECTSI9.570e-7664.62Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A836CQ20_9STRA3.610e-2536.132Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A0M0K3H8_9EUKA2.650e-1444.95Ferredoxin (2fe-2s) n=1 Tax=Chrysochromulina tobin... [more]
A0A7S4F9M2_CHRCT2.840e-1336.61Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A6V1VDI3_HETAK3.360e-1230.16Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4EXA3_VITBC7.170e-1234.262Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A0G4EFE2_VITBC8.840e-1239.772Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S2BT51_9STRA3.190e-1134.69Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A4D9D796_9STRA1.330e-1034.152Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S2YSW2_9STRA2.390e-937.50Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 94..169
e-value: 1.4E-11
score: 44.2
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 88..181
score: 11.195
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 81..183
e-value: 1.5E-18
score: 68.5
NoneNo IPR availablePANTHERPTHR43112FAMILY NOT NAMEDcoord: 95..175
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..236
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.501
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 88..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72240contigH-elongata_contig72240:163..2678 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72240.14897.1mRNA_H-elongata_contig72240.14897.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig72240 19..2683 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig72240.14897.1 ID=prot_H-elongata_contig72240.14897.1|Name=mRNA_H-elongata_contig72240.14897.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=237bp
MSSIVKYVTTLALLCPSPYVSAFGIRPSQGMQPMQAPRSTRCEHKLCESN
GRGGEDLGDVDVDVDDDVTEKGKRVPPQLVQSVLPRPWDVEVVLHGERHI
ITVHPGDSILEAAEMAGMNISYECRRGSCISCAAKVQSGSSGCFENRADR
RADDGAPEGFVLTCSTHPTGPGVKLELSANADMWEAYCKRFDDMETRDLL
RQASAGLMRKYRMEHPQDFRREVERQFEAGVAAPDP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf
IPR0360102Fe-2S_ferredoxin-like_sf