prot_H-elongata_contig72236.14895.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig72236.14895.1
Unique Name	prot_H-elongata_contig72236.14895.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	128

Homology

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BLAST of mRNA_H-elongata_contig72236.14895.1 vs. uniprot
Match: A0A6H5KAI3_9PHAE (Chromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI3_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 5.430e-27
Identity = 49/115 (42.61%), Postives = 78/115 (67.83%), Query Frame = 0

Query:   15 KLVQTWTGPWRIVPGGSEHVRVVEDIVKGETQEVHVVRMRPYADSSLVVGAEVREVLEMTKHKGEFEMADVISVGKDPVQVGE-YRVQIAWVGLEDEEPTWEPMSTTYADAPKYI 128
            KL  TWTGPWR+V    +HV  V++IV G+ ++VHV R+R YADS L V +++++V + +  +GE EM  ++++G  P   G  Y V++ W G E++E TW+P+S  Y DAP+++
Sbjct:   34 KLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIG--PAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDAPQFL 146

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BLAST of mRNA_H-elongata_contig72236.14895.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 5.650e-25
Identity = 49/115 (42.61%), Postives = 78/115 (67.83%), Query Frame = 0

Query:   15 KLVQTWTGPWRIVPGGSEHVRVVEDIVKGETQEVHVVRMRPYADSSLVVGAEVREVLEMTKHKGEFEMADVISVGKDPVQVGE-YRVQIAWVGLEDEEPTWEPMSTTYADAPKYI 128
            KL  TWTGPWR+V    +HV  V++IV G+ ++VHV R+R YADS L V +++++V + +  +GE EM  ++++G  P   G  Y V++ W G E++E TW+P+S  Y DAP+++
Sbjct:  289 KLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIG--PAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDAPQFL 401

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BLAST of mRNA_H-elongata_contig72236.14895.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 1.630e-24
Identity = 49/115 (42.61%), Postives = 78/115 (67.83%), Query Frame = 0

Query:   15 KLVQTWTGPWRIVPGGSEHVRVVEDIVKGETQEVHVVRMRPYADSSLVVGAEVREVLEMTKHKGEFEMADVISVGKDPVQVGE-YRVQIAWVGLEDEEPTWEPMSTTYADAPKYI 128
            KL  TWTGPWR+V    +HV  V++IV G+ ++VHV R+R YADS L V +++++V + +  +GE EM  ++++G  P   G  Y V++ W G E++E TW+P+S  Y DAP+++
Sbjct: 1512 KLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIG--PAHDGSGYLVRVRWAGFEEDEDTWQPLSDIYQDAPQFL 1624

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BLAST of mRNA_H-elongata_contig72236.14895.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 4.450e-15
Identity = 42/107 (39.25%), Postives = 67/107 (62.62%), Query Frame = 0

Query:   22 GPWRIVPGGSEHVRVVEDIVKGETQEVHVVRMRPYADSSLVVGAEVREVLEMTKHKGEFEMADVISVGKDPVQVGEYRVQIAWVGLEDEEPTWEPMSTTYADAPKYI 128
            G + IV     HV  V++IV GE ++VHV R+R YAD++L + AE++EV +    +GEFEMA ++ +       G + V++ WVG + EE TWE +S  +  AP+++
Sbjct: 1598 GDYVIVAAERLHVYGVQNIVSGEVRDVHVARLRFYADAALEITAELKEVFQHAFTQGEFEMAAIVDMSVAEDGPG-FDVEVEWVGFDKEENTWEELSKMWDAAPQFV 1703

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BLAST of mRNA_H-elongata_contig72236.14895.1 vs. uniprot
Match: A0A6G0RPX5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RPX5_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 5.260e-15
Identity = 44/125 (35.20%), Postives = 71/125 (56.80%), Query Frame = 0

Query:    4 WLGCGNRVPVRKLVQTWTGPWRIVPGGSEHVRVVEDIVKGETQEVHVVRMRPYADSSLVVGAEVREVLEMTKHKGEFEMADVISVGKDPVQVGEYRVQIAWVGLEDEEPTWEPMSTTYADAPKYI 128
            W    +R+   KL+  W GP+R+V    +H  ++E ++  +  EVH  R++ Y DSSL V AE++E   + K      +  +++   +PV   E+ VQ+AW+GLED E +WEP+   YAD P  +
Sbjct:  233 WSRVDSRLQGSKLLVRWVGPFRVVEA-RQHSFIIEHLITKDKVEVHGSRLKFYCDSSLNVTAELKE--HVAKQGIVLGVRAIVNHRNNPVS-NEWEVQVAWIGLEDVENSWEPLRRIYADVPTKV 353

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BLAST of mRNA_H-elongata_contig72236.14895.1 vs. uniprot
Match: A0A6A4G1U2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4G1U2_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.030e-14
Identity = 43/125 (34.40%), Postives = 71/125 (56.80%), Query Frame = 0

Query:    4 WLGCGNRVPVRKLVQTWTGPWRIVPGGSEHVRVVEDIVKGETQEVHVVRMRPYADSSLVVGAEVREVLEMTKHKGEFEMADVISVGKDPVQVGEYRVQIAWVGLEDEEPTWEPMSTTYADAPKYI 128
            W    +R+   KL+  W GP+R+V    +H  +++ ++  +  EVH  R++ Y DSSL V AE++E   + K      +  +++   +PV   E+ VQ+AW+GLED E +WEP+   YAD P  +
Sbjct:  856 WSRVDSRLQGSKLLVRWVGPFRVVEA-RQHSFIIDHLITKDKVEVHGSRLKFYCDSSLNVTAELKE--HVAKQGIVLGVRAIVNHRNNPVS-NEWEVQVAWIGLEDVENSWEPLRRIYADVPTKV 976

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BLAST of mRNA_H-elongata_contig72236.14895.1 vs. uniprot
Match: A0A6A3KPV3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3KPV3_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.080e-14
Identity = 43/125 (34.40%), Postives = 71/125 (56.80%), Query Frame = 0

Query:    4 WLGCGNRVPVRKLVQTWTGPWRIVPGGSEHVRVVEDIVKGETQEVHVVRMRPYADSSLVVGAEVREVLEMTKHKGEFEMADVISVGKDPVQVGEYRVQIAWVGLEDEEPTWEPMSTTYADAPKYI 128
            W    +R+   KL+  W GP+R+V    +H  +++ ++  +  EVH  R++ Y DSSL V AE++E   + K      +  +++   +PV   E+ VQ+AW+GLED E +WEP+   YAD P  +
Sbjct: 1272 WSRVDSRLQGSKLLVRWVGPFRVVEA-RQHSFIIDHLITKDKVEVHGSRLKFYCDSSLNVTAELKE--HVAKQGIVLGVRAIVNHRNNPVS-NEWEVQVAWIGLEDVENSWEPLRRIYADVPTKV 1392

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BLAST of mRNA_H-elongata_contig72236.14895.1 vs. uniprot
Match: A0A225VKM9_9STRA (RNA-directed DNA polymerase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VKM9_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 8.540e-13
Identity = 41/125 (32.80%), Postives = 67/125 (53.60%), Query Frame = 0

Query:    4 WLGCGNRVPVRKLVQTWTGPWRIVPGGSEHVRVVEDIVKGETQEVHVVRMRPYADSSLVVGAEVREVLEMTKHKGEFEMADVISVGKDPVQVGEYRVQIAWVGLEDEEPTWEPMSTTYADAPKYI 128
            W    +R+   KL+  W GP+R+V    +H  +V+ ++  +  EVH  R++ Y DSSL V AE++E +         +   V+ V        ++ VQ+AW+GLED E +WEP+ + Y D P  +
Sbjct: 1087 WSRVDSRLQGSKLLVRWVGPFRVVEA-RQHSFIVQHLITKDKVEVHGSRLKFYCDSSLNVTAELKEHVA--------KQGIVLGVRASITGSTQWEVQVAWIGLEDVENSWEPLRSIYVDVPTKV 1202

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BLAST of mRNA_H-elongata_contig72236.14895.1 vs. uniprot
Match: A0A6H5LBX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBX7_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.010e-11
Identity = 33/68 (48.53%), Postives = 46/68 (67.65%), Query Frame = 0

Query:   19 TWTGPWRIVPGGSEHVRVVEDIVKGETQEVHVVRMRPYADSSLVVGAEVREVLEMTKHKGEFEMADVI 86
            TWTGPWRIV     HV  V++IV GE ++VHV R+R YAD+SL + A  ++V +    + EFEMA ++
Sbjct:    2 TWTGPWRIVAAVRPHVCGVQNIVWGEDRDVHVARLRFYADASLEITAGSKDVFKHAFTQEEFEMAAIV 69

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BLAST of mRNA_H-elongata_contig72236.14895.1 vs. uniprot
Match: A0A6A3L091_9STRA (RNA-directed DNA polymerase n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3L091_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 5.800e-10
Identity = 37/125 (29.60%), Postives = 64/125 (51.20%), Query Frame = 0

Query:    4 WLGCGNRVPVRKLVQTWTGPWRIVPGGSEHVRVVEDIVKGETQEVHVVRMRPYADSSLVVGAEVREVLEMTKHKGEFEMADVISVGKDPVQVGEYRVQIAWVGLEDEEPTWEPMSTTYADAPKYI 128
            W     R+P RKL+  W GP+ IV     +  ++ +++ G+  EVHV R++ Y DSSL +  EVRE +     +G     +     +       ++++++WVGL+D E +WE +     D P  +
Sbjct: 1166 WSRIDARLPTRKLLGRWVGPF-IVAEAKRNSFIIRNLITGKQHEVHVTRLKFYHDSSLNITQEVREFVT---EQGILLDVEAFKQHRFEPTSKMWQLRVSWVGLQDVEDSWESLPDLVKDVPARV 1286

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig72236.14895.1 vs. uniprot

BLAST of mRNA_H-elongata_contig72236.14895.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KAI3_9PHAE	5.430e-27	42.61	Chromo domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A6H5JVS6_9PHAE	5.650e-25	42.61	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L7F6_9PHAE	1.630e-24	42.61	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K5A5_9PHAE	4.450e-15	39.25	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6G0RPX5_9STRA	5.260e-15	35.20	Uncharacterized protein n=4 Tax=Phytophthora fraga...	[more]
A0A6A4G1U2_9STRA	2.030e-14	34.40	Uncharacterized protein n=1 Tax=Phytophthora rubi ...	[more]
A0A6A3KPV3_9STRA	2.080e-14	34.40	Uncharacterized protein n=3 Tax=Phytophthora rubi ...	[more]
A0A225VKM9_9STRA	8.540e-13	32.80	RNA-directed DNA polymerase n=1 Tax=Phytophthora m...	[more]
A0A6H5LBX7_9PHAE	1.010e-11	48.53	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6A3L091_9STRA	5.800e-10	29.60	RNA-directed DNA polymerase n=6 Tax=Phytophthora T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 65..128 score: 9.843

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig72236	contig	H-elongata_contig72236:1660..2043 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig72236.14895.1	mRNA_H-elongata_contig72236.14895.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig72236 1645..2043 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig72236.14895.1 ID=prot_H-elongata_contig72236.14895.1|Name=mRNA_H-elongata_contig72236.14895.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=128bp
MSWWLGCGNRVPVRKLVQTWTGPWRIVPGGSEHVRVVEDIVKGETQEVHV
VRMRPYADSSLVVGAEVREVLEMTKHKGEFEMADVISVGKDPVQVGEYRV
QIAWVGLEDEEPTWEPMSTTYADAPKYI

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000953	Chromo/chromo_shadow_dom